Discrimination of Curcuma species from Asia using intron length polymorphism markers in genes encoding diketide-CoA synthase and curcumin synthase

Author(s):  
Qundong Liu ◽  
Shu Zhu ◽  
Shigeki Hayashi ◽  
Osamu Iida ◽  
Akihito Takano ◽  
...  
2016 ◽  
Vol 194 ◽  
pp. 1329-1336 ◽  
Author(s):  
Tomoko Kita ◽  
Katsuko Komatsu ◽  
Shu Zhu ◽  
Osamu Iida ◽  
Koji Sugimura ◽  
...  

2021 ◽  
Vol 28 ◽  
pp. 36-41
Author(s):  
Yu. O. Bilonozhko ◽  
A. M. Rabokon ◽  
A. S. Postovoitova ◽  
L. O. Kalafat ◽  
N. S. Boiko ◽  
...  

Aim. The aim of the study was to establish genetic differences between V. album growing in different parts of Ukraine. Methods. White mistletoe samples collected in different regions of Ukraine were used in the study. The method of estimating the intron length polymorphism of β-tubulin genes was used. Amplified DNA fragments were fractionated by non-denaturing polyacrylamide gel electrophoresis and visualized by silver nitrate staining. Results. The genotypes of 91 white mistletoe plants were analyzed. DNA profiles of white mistletoe with a specific amplicons of β-tubulin gene introns were obtained, which allowed to differentiate the samples from each other. Fingerprinting data were used for cluster analysis and dendrogram construction. Conclusions. It was found that the analyzed mistletoe samples did not differ by geographical factor and were characterized by a low level of genetic diversity in the studied samples. Keywords: Viscum album L., intron length polymorphism, β-tubulin, genetic variability, Ukraine.


2012 ◽  
Vol 124 (5) ◽  
pp. 821-824
Author(s):  
Yves Castonguay ◽  
Marie-Pier Dubé ◽  
Jean Cloutier ◽  
Réal Michaud ◽  
Annick Bertrand ◽  
...  

2018 ◽  
Vol 22 ◽  
pp. 180-185
Author(s):  
A. M. Rabokon ◽  
Ya. B. Pirko ◽  
L. O. Kalafat ◽  
Ye. V. Guzenko ◽  
M. V. Bogdanova ◽  
...  

Aim. The aim of the work was to evaluate the possibilities of using the β-tubulin intron length (TBP, Tubulin Based Polymorphism) for genetic differentiation of ancient flax varieties (landraces), plants that was historically formed in Belarus. Methods. The β-tubulin first intron length polymorphism evaluating method (TBP) was used. Amplified fragments (β-tubulin introns) were fractionated by electrophoresis in non-denaturing polyacrylamide gel. DNA bands were detected using silver nitrate staining. Results. The size of the amplified fragments varied from 400 bp to 1900 bp. It was found that 25 of 30 studied varieties (landraces) were genetically heterogeneous. The total number of allele phenotypes was 7, and the value of PIC (Polymorphism Information Content) varied from 0.0 to 0.72. Conclusions. The data obtained make it possible to recommend landraces as a source of genes for increasing the genetic diversity of the existing flax gene pool, and the TBP method can be applied both in molecular-phylogenetic analysis and in molecular selection of flax. Keywords: Linum usitatissimum, landrace, molecular markers, DNA fingerprinting, β-tubulin genes, intron polymorphism.


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