Next-Generation Sequencing for Inherited Breast Cancer Risk: Counseling through the Complexity

2014 ◽  
Vol 16 (3) ◽  
Author(s):  
Irene R. Rainville ◽  
Huma Q. Rana
2016 ◽  
Author(s):  
Nancy A. Uhrhammer ◽  
Nagi El Saghir ◽  
Yannick Bidet ◽  
Manon Delahaye-Sourdeix ◽  
Flora Ponelle ◽  
...  

2021 ◽  
Author(s):  
Michela Biancolella ◽  
Nabonswindé Lamoussa Marie Ouedraogo ◽  
Nayi Zongo ◽  
Théodora Mahoukèdè Zohoncon ◽  
Barbara Testa ◽  
...  

Abstract Background: Breast cancer (BC) is the most commonly diagnosed cancer and the second leading cause of cancer-related deaths, after cervical cancer, among women in Africa. Even if the epidemiological data are now aligned with those relating to industrialized countries, the knowledge concerning breast cancer in Africa, in particularly in Western Africa still lack clinical data, medical treatments, and the evaluation of genetic and non-genetic factors implicated in the etiology of the disease.The early onset and the aggressiveness of diagnosed breast cancers in patients of African ancestry strongly suggest that the genetic risk factor may play an important role but up to date very few studies have been done concerning the impact of germ line mutations in breast cancer in Africa, with a negative impact on prevention, awareness and patient management.We have performed by Next Generation sequencing (NGS) the analysis of all coding regions and the exon-intron junctions of BRCA1 and BRCA2 genes, the two most important genes in hereditary breast cancer, in fifty-one women from Burkina Faso with early onset of breast cancer and or without a family history.Results: We identified six different pathogenic mutations (3 in BRCA1, 3 in BRCA2), two of which have been found to be recurrent , in 8 unrelated women.In addition, we identified, in 4 other patients, two variants of uncertain clinical significance (VUS) and two variants never previously described in literature, although one of which is present in the dbSNP database.Conclusions: The present study is the first in which the entire coding sequence of BRCA genes have been analyzed by Next Generation Sequencing in Burkinabe young women with breast cancer. Our data support the importance of genetic risk factors in the etiology of breast cancer in this population and suggests the necessity to improve the genetic cancer risk assessment. Furthermore, the identification of the most frequent mutations of BRCA1 and BRCA2 in the population of Burkina Faso will allow the development of an inexpensive genetic test for the identification of subjects at high genetic cancer risk, which could be used to design personalized therapeutic protocols.


2021 ◽  
Vol 15 (1) ◽  
Author(s):  
Michela Biancolella ◽  
Nabonswindé Lamoussa Marie Ouédraogo ◽  
Nayi Zongo ◽  
Théodora Mahoukèdè Zohoncon ◽  
Barbara Testa ◽  
...  

Abstract Background Breast cancer (BC) is the most commonly diagnosed cancer and the second leading cause of cancer-related deaths among women in Africa after cervical cancer. Even if the epidemiological data are now aligned with those relating to industrialized countries, the knowledge concerning breast cancer in Africa, particularly in Western Africa, still lack clinical data, medical treatments, and the evaluation of genetic and non-genetic factors implicated in the etiology of the disease. The early onset and the aggressiveness of diagnosed breast cancers in patients of African ancestry strongly suggest that the genetic risk factor may be a key component, but so far, very few studies on the impact of germ line mutations in breast cancer in Africa have been conducted, with negative consequences on prevention, awareness and patient management. Through Next Generation sequencing (NGS), we analyzed all of the coding regions and the exon–intron junctions of BRCA1 and BRCA2 genes—the two most important genes in hereditary breast cancer—in fifty-one women from Burkina Faso with early onset of breast cancer with or without a family history. Results We identified six different pathogenic mutations (three in BRCA1, three in BRCA2), two of which were recurrent in eight unrelated women. Furthermore, we identified, in four other patients, two variants of uncertain clinical significance (VUS) and two variants never previously described in literature, although one of them is present in the dbSNP database. Conclusions This is the first study in which the entire coding sequence of BRCA genes has been analyzed through Next Generation Sequencing in Burkinabe young women with breast cancer. Our data support the importance of genetic risk factors in the etiology of breast cancer in this population and suggest the necessity to improve the genetic cancer risk assessment. Furthermore, the identification of the most frequent mutations of BRCA1 and BRCA2 in the population of Burkina Faso will allow the development of an inexpensive genetic test for the identification of subjects at high genetic cancer risk, which could be used to design personalized therapeutic protocols.


2020 ◽  
Vol 111 (4) ◽  
pp. 1375-1384 ◽  
Author(s):  
Po‐Han Lin ◽  
Ming Chen ◽  
Li‐Wei Tsai ◽  
Chiao Lo ◽  
Tzu‐Chun Yen ◽  
...  

2019 ◽  
Vol 21 (2) ◽  
pp. 307-317 ◽  
Author(s):  
Sounak Gupta ◽  
Chad M. Vanderbilt ◽  
Paolo Cotzia ◽  
Javier A. Arias-Stella ◽  
Jason C. Chang ◽  
...  

Author(s):  
Kar-Yan Su ◽  
Wai-Leng Lee ◽  
Vinod Balasubramaniam

One in eight women will be diagnosed with breast cancer (BC) in their lifetime, resulting in over 2 million cases annually. BC is the most common cancer among women. Unfortunately, the etiology of majority of cases remains unknown. Recently, evidence has shown that the human microbiota plays an important role in health and disease. Intriguingly, studies have revealed the presence of microorganisms in human breast tissue, which was previously presumed to be sterile. Next-generation sequencing technologies have paved way for the investigation of breast microbiota, uncovering bacterial signatures that are associated with BC. Some of the bacterial species were found to possess pro-carcinogenic and/or anti-carcinogenic properties, suggesting that the breast microbiota has potentially crucial roles in maintenance of breast health. In this review, we summarize the recent findings on breast tissue microbiota and its interplay with BC. Bacterial signatures identified via next-generation sequencing as well as their impact on breast carcinogenesis and cancer therapies are reviewed. Correlation of breast tissue microbiota and other factors, such as geographical and racial differences, in BC is discussed. Additionally, we discuss the future directions of research on breast microbiota as well as its potential role in prevention, diagnosis and treatment of BC.


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