Effect of temperature on radiation damage to aromatic organic molecules

1992 ◽  
Vol 40 (2) ◽  
pp. 163-169 ◽  
Author(s):  
J.R. Fryer ◽  
C.H. McConnell ◽  
F. Zemlin ◽  
D.L. Dorset
2021 ◽  
Vol 27 (S1) ◽  
pp. 3358-3359
Author(s):  
Hyeokmin Choe ◽  
Eric Montgomery ◽  
Ilya Ponomarev ◽  
June Lau ◽  
Yimei Zhu ◽  
...  

1973 ◽  
Vol 28 (10) ◽  
pp. 1729-1731 ◽  
Author(s):  
R. Spehr ◽  
H. Schnabl

If an electron initially was localized at one carbon atom of a benzene molecule, its probability density will quickly dissipate over the whole ring. A rough model calculation using Wannier functions yields T1/2 ≳ 10-16 sec for the decay of the original distribution. A similar spreading will happen to a defect electron produced locally at the bond between two atoms. This effect of “healing” should be taken into consideration when the mechanism of radiation damage in organic molecules is discussed.


1989 ◽  
Vol 43 (5) ◽  
pp. 781-786 ◽  
Author(s):  
S. Jagannathan ◽  
J. R. Cooper ◽  
C. L. Wilkins

A major factor limiting extensive use of matrix isolation gas chromatography-Fourier transform infrared spectrometry is the incompatibility of matrix-isolated spectra with available vapor- or condensed-phase spectral data bases. Here, matrix and surface effects on matrix isolation infrared spectra of organic molecules are investigated. Use of xenon at −215°C (58 K) to obtain matrix isolation spectra that are similar to condensed-phase spectra is demonstrated. Finally, the effect of temperature on reflection-absorption infrared spectra of matrix-isolated molecules is discussed, and guidelines for obtaining and interpreting matrix isolation infrared spectra of gas chromatographic eluants using the existing condensed phase data bases are provided.


2020 ◽  
Author(s):  
Kasper Kristensen ◽  
Louise N. Jensen ◽  
Lauriane L. J. Quéléver ◽  
Sigurd Christiansen ◽  
Bernadette Rosati ◽  
...  

Abstract. Little is known about the effects of low temperatures on the formation of SOA from α-pinene. In the current work, ozone-initiated oxidation of α-pinene at initial concentrations of 10 and 50 ppb, respectively, is performed at temperatures of 20, 0 and −15 °C in the Aarhus University Research on Aerosol (AURA) smog chamber during the Aarhus Chamber Campaign on highly oxidized multifunctional organic molecules and Aerosol (ACCHA). Here, we show how temperature influences the formation and chemical composition of α-pinene-derived SOA with a specific focus on the formation of organic acids and dimer esters. With respect to particle formation, results show significant increase in both particle formation rates, particle number concentrations and particle mass concentrations at lower temperatures. In particular, the number concentrations of sub-10 nm particles were significantly enhanced at the lower 0 and -15 °C temperatures. Temperatures also affect chemical composition of the formed SOA. Here, detailed off-line chemical analyses show organic acids contributing from 15 to 30 % by mass, with highest contributions observed at the lower temperatures indicative of enhanced condensation of these semi-volatile species. In comparison, 30 identified dimer esters contribute between 4–11 % to SOA mass. No significant differences in the chemical composition (i.e. organic acids and dimer esters) of the α-pinene-derived SOA particles are observed between experiments performed at 10 and 50 ppb initial α-pinene concentrations, thus suggesting a higher influence of reaction temperature compared to that of α-pinene loading on the SOA chemical composition. Interestingly, the effect of temperature on the formation of dimer esters differs between the individual species. The formation of less oxidized (oxygen-to-carbon ratio (O:C) < 0.4) dimer esters is shown to increase at lower temperatures while the formation of the more oxidized (O:C > 0.4) species is suppressed, consequently resulting in temperature-modulated composition of the α-pinene derived SOA. Temperature ramping experiments exposing α-pinene-derived SOA to changing temperatures (heating and cooling) reveal that the chemical composition of the SOA with respect to dimer esters is governed almost solely by the temperature during the initial oxidization and insusceptible to subsequent changes in temperature. Similarly, the resulting SOA mass concentrations were found to be more influenced by the initial α-pinene oxidation temperatures, thus suggesting that the formation conditions to a large extent govern the type of SOA formed, rather than the conditions to which the SOA is later exposed. For the first time, we discuss the relation between the identified dimer ester and the highly oxidized multifunctional organic molecules (HOMs) measured by Chemical Ionization Atmospheric Pressure interface Time-of-Flight mass spectrometer (CI-APi-TOF) during ACCHA experiments. We propose that, although very different in chemical structures and O:C-ratios, dimer esters and HOMs may be linked through the mechanism of RO2 autoxidation, and that dimer esters and HOMs merely represent two different fates of the RO2 radicals.


Author(s):  
Manoj Misra ◽  
R.F. Egerton

Radiation damage is the main limiting factor in attempting high resolution electron microscopy of biological macromolecules1,2. To better understand the process of radiation damage, a systematic study of various amino acids, peptides and nucleic acid bases has been undertaken. We report here some preliminary results obtained with glycine, glycyl-glycine, cystine, cysteine and uracil at room temperature. Specimens of these compounds were prepared by slow evaporation of their aqueous solutions (except of glycylglycine which gave better crystals when the solvent used was N-propanol) on carbon coated grids.


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