A review of fluid flow in and around the brain, modeling, and abnormalities

2022 ◽  
pp. 209-238
Author(s):  
R. Prichard ◽  
M. Gibson ◽  
C. Joseph ◽  
W. Strasser
Keyword(s):  
2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Frederic Alexandre

AbstractThe brain is a complex system, due to the heterogeneity of its structure, the diversity of the functions in which it participates and to its reciprocal relationships with the body and the environment. A systemic description of the brain is presented here, as a contribution to developing a brain theory and as a general framework where specific models in computational neuroscience can be integrated and associated with global information flows and cognitive functions. In an enactive view, this framework integrates the fundamental organization of the brain in sensorimotor loops with the internal and the external worlds, answering four fundamental questions (what, why, where and how). Our survival-oriented definition of behavior gives a prominent role to pavlovian and instrumental conditioning, augmented during phylogeny by the specific contribution of other kinds of learning, related to semantic memory in the posterior cortex, episodic memory in the hippocampus and working memory in the frontal cortex. This framework highlights that responses can be prepared in different ways, from pavlovian reflexes and habitual behavior to deliberations for goal-directed planning and reasoning, and explains that these different kinds of responses coexist, collaborate and compete for the control of behavior. It also lays emphasis on the fact that cognition can be described as a dynamical system of interacting memories, some acting to provide information to others, to replace them when they are not efficient enough, or to help for their improvement. Describing the brain as an architecture of learning systems has also strong implications in Machine Learning. Our biologically informed view of pavlovian and instrumental conditioning can be very precious to revisit classical Reinforcement Learning and provide a basis to ensure really autonomous learning.


2015 ◽  
Vol 11 (8) ◽  
pp. e1004445 ◽  
Author(s):  
Adrián Ponce-Alvarez ◽  
Biyu J. He ◽  
Patric Hagmann ◽  
Gustavo Deco

2019 ◽  
Vol 29 (2) ◽  
pp. 229-241.e6 ◽  
Author(s):  
Emilie W. Olstad ◽  
Christa Ringers ◽  
Jan N. Hansen ◽  
Adinda Wens ◽  
Cecilia Brandt ◽  
...  

2016 ◽  
Vol 2016 ◽  
pp. 1-9 ◽  
Author(s):  
Dan Peng ◽  
Zhiheng Zhou ◽  
Yin Liu ◽  
Tianfu Guo ◽  
Ying Li ◽  
...  

This paper aims at studying the effect of sulci structures during tumor growth and cerebral edema in brain tissues. Motivated by the Intracranial Cerebral Pressure (ICP) monitoring during the brain surgery, a computational model has been created to study macroscopic behaviors of brain tissues with local volume expansion introduced by the tumor growth and cerebral edema. To consider the extra-large deformation during the tumor growth, a nonlinear finite element method has been adopted. Numerical simulation results reveal that sulci structures play significant roles in macroscopic volume expansion and maximum stress of brain tissues. Without considering the sulci structures, predictions on the ICP will be dramatically different from those including sulci structure. Therefore, it is strongly suggested that the sulci structure should be included in future studies on the brain modeling for investigating the space-occupying lesions.


2010 ◽  
Vol 39 (3) ◽  
pp. 353-362 ◽  
Author(s):  
Markus Fridén ◽  
Fredrik Bergström ◽  
Hong Wan ◽  
Mikael Rehngren ◽  
Gustav Ahlin ◽  
...  

2020 ◽  
Vol 13 (10) ◽  
pp. dmm045344
Author(s):  
Zakia Abdelhamed ◽  
Marshall Lukacs ◽  
Sandra Cindric ◽  
Heymut Omran ◽  
Rolf W. Stottmann

ABSTRACTPrimary ciliary dyskinesia (PCD) is a human condition of dysfunctional motile cilia characterized by recurrent lung infection, infertility, organ laterality defects and partially penetrant hydrocephalus. We recovered a mouse mutant from a forward genetic screen that developed many of the hallmark phenotypes of PCD. Whole-exome sequencing identified this primary ciliary dyskinesia only (Pcdo) allele to be a nonsense mutation (c.5236A>T) in the Spag17 coding sequence creating a premature stop codon (K1746*). The Pcdo variant abolished several isoforms of SPAG17 in the Pcdo mutant testis but not in the brain. Our data indicate differential requirements for SPAG17 in different types of motile cilia. SPAG17 is essential for proper development of the sperm flagellum and is required for either development or stability of the C1 microtubule structure within the central pair apparatus of the respiratory motile cilia, but not the brain ependymal cilia. We identified changes in ependymal ciliary beating frequency, but these did not appear to alter lateral ventricle cerebrospinal fluid flow. Aqueductal stenosis resulted in significantly slower and abnormally directed cerebrospinal fluid flow, and we suggest that this is the root cause of the hydrocephalus. The Spag17Pcdo homozygous mutant mice are generally viable to adulthood but have a significantly shortened lifespan, with chronic morbidity. Our data indicate that the c.5236A>T Pcdo variant is a hypomorphic allele of Spag17 that causes phenotypes related to motile, but not primary, cilia. Spag17Pcdo is a useful new model for elucidating the molecular mechanisms underlying central pair PCD pathogenesis in the mouse.This article has an associated First Person interview with the first author of the paper.


2019 ◽  
Vol 116 (36) ◽  
pp. 18088-18097 ◽  
Author(s):  
Gustavo Deco ◽  
Josephine Cruzat ◽  
Joana Cabral ◽  
Enzo Tagliazucchi ◽  
Helmut Laufs ◽  
...  

A fundamental problem in systems neuroscience is how to force a transition from one brain state to another by external driven stimulation in, for example, wakefulness, sleep, coma, or neuropsychiatric diseases. This requires a quantitative and robust definition of a brain state, which has so far proven elusive. Here, we provide such a definition, which, together with whole-brain modeling, permits the systematic study in silico of how simulated brain stimulation can force transitions between different brain states in humans. Specifically, we use a unique neuroimaging dataset of human sleep to systematically investigate where to stimulate the brain to force an awakening of the human sleeping brain and vice versa. We show where this is possible using a definition of a brain state as an ensemble of “metastable substates,” each with a probabilistic stability and occurrence frequency fitted by a generative whole-brain model, fine-tuned on the basis of the effective connectivity. Given the biophysical limitations of direct electrical stimulation (DES) of microcircuits, this opens exciting possibilities for discovering stimulation targets and selecting connectivity patterns that can ensure propagation of DES-induced neural excitation, potentially making it possible to create awakenings from complex cases of brain injury.


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