Extrapair fertilizations vary with female traits and pair composition, besides male attractiveness, in barn swallows

2017 ◽  
Vol 134 ◽  
pp. 183-191 ◽  
Author(s):  
Alessandra Costanzo ◽  
Roberto Ambrosini ◽  
Manuela Caprioli ◽  
Emanuele Gatti ◽  
Marco Parolini ◽  
...  
2020 ◽  
Vol 15 ◽  
Author(s):  
Shulin Zhao ◽  
Ying Ju ◽  
Xiucai Ye ◽  
Jun Zhang ◽  
Shuguang Han

Background: Bioluminescence is a unique and significant phenomenon in nature. Bioluminescence is important for the lifecycle of some organisms and is valuable in biomedical research, including for gene expression analysis and bioluminescence imaging technology.In recent years, researchers have identified a number of methods for predicting bioluminescent proteins (BLPs), which have increased in accuracy, but could be further improved. Method: In this paper, we propose a new bioluminescent proteins prediction method based on a voting algorithm. We used four methods of feature extraction based on the amino acid sequence. We extracted 314 dimensional features in total from amino acid composition, physicochemical properties and k-spacer amino acid pair composition. In order to obtain the highest MCC value to establish the optimal prediction model, then used a voting algorithm to build the model.To create the best performing model, we discuss the selection of base classifiers and vote counting rules. Results: Our proposed model achieved 93.4% accuracy, 93.4% sensitivity and 91.7% specificity in the test set, which was better than any other method. We also improved a previous prediction of bioluminescent proteins in three lineages using our model building method, resulting in greatly improved accuracy.


1997 ◽  
Vol 75 (7) ◽  
pp. 1176-1183 ◽  
Author(s):  
Horacio de la Cueva ◽  
Robert W. Blake

Aerodynamic power equations predict optimal speeds at which birds ought to fly if they are to maximize time spent in the air on a given energy store (minimum power speed, Vmp), distance covered using a given amount of fuel (maximum range speed, Vmr), and rate of delivering food to the chicks in the nest (Vnest), or maximize the daily energy balance (VDBAL). With the aerodynamic model employed, these speeds are 5.3, 7.0, 7.9, and 8.9 m∙s−1, respectively, for the Barn Swallow, Hirundo rustica. A comparison of the predicted flight speed with both the mean and median flight speeds (8 m∙s−1 in both cases; n = 821) recorded with Doppler radar indicates that Barn Swallows fly at speeds not significantly different from Vnest. The true sample size was unknown, and realistic sample sizes are drawn with bootstrap procedures and compared with those given by the number of measurements (821); no significant differences were found. To test the model, energy requirements for growth, prey density, and time spent foraging were varied independently in a sensitivity analysis. Large but realistic changes in these three variables do not contradict the model and predict speeds within the range measured in the field.


Molecules ◽  
2021 ◽  
Vol 26 (14) ◽  
pp. 4315
Author(s):  
Antonija Erben ◽  
Igor Sviben ◽  
Branka Mihaljević ◽  
Ivo Piantanida ◽  
Nikola Basarić

A series of tripeptides TrpTrpPhe (1), TrpTrpTyr (2), and TrpTrpTyr[CH2N(CH3)2] (3) were synthesized, and their photophysical properties and non-covalent binding to polynucleotides were investigated. Fluorescent Trp residues (quantum yield in aqueous solvent ΦF = 0.03–0.06), allowed for the fluorometric study of non-covalent binding to DNA and RNA. Moreover, high and similar affinities of 2×HCl and 3×HCl to all studied double stranded (ds)-polynucleotides were found (logKa = 6.0–6.8). However, the fluorescence spectral responses were strongly dependent on base pair composition: the GC-containing polynucleotides efficiently quenched Trp emission, at variance to AT- or AU-polynucleotides, which induced bisignate response. Namely, addition of AT(U) polynucleotides at excess over studied peptide induced the quenching (attributed to aggregation in the grooves of polynucleotides), whereas at excess of DNA/RNA over peptide the fluorescence increase of Trp was observed. The thermal denaturation and circular dichroism (CD) experiments supported peptides binding within the grooves of polynucleotides. The photogenerated quinone methide (QM) reacts with nucleophiles giving adducts, as demonstrated by the photomethanolysis (quantum yield ΦR = 0.11–0.13). Furthermore, we have demonstrated photoalkylation of AT oligonucleotides by QM, at variance to previous reports describing the highest reactivity of QMs with the GC reach regions of polynucleotides. Our investigations show a proof of principle that QM precursor can be imbedded into a peptide and used as a photochemical switch to enable alkylation of polynucleotides, enabling further applications in chemistry and biology.


2002 ◽  
Vol 205 (16) ◽  
pp. 2461-2467 ◽  
Author(s):  
Felix Liechti ◽  
Lukas Bruderer

SUMMARYThe flight paths and wingbeat patterns of 39 barn swallows (Hirundo rustica) and 26 house martins (Delichon urbica) were recorded by tracking radar during the spring migration. Depending mostly on flight angle,hirundines performed anything from continuous flapping flight during climbing to single pulse-like wing beats during descent. Unlike most other passerines,hirundines rarely showed regular flapping and rest phases, allowing them to be distinguished from other bird migrants by radar echo signatures. Effective wingbeat frequency (Feff) was calculated as the mean number of wing beats per second, including non-flapping phases. Under comparable flight conditions, Feff was higher in house martins than in barn swallows. Within species, Feff values were higher during climbing and slow flying than during descent. Of the variance in Feff, 71 % could be explained by climb rate,air speed and species; similar results were obtained in the wind tunnel. Under comparable flight conditions, barn swallows and house martins in free flight had significantly lower values of Feff than individuals in wind tunnel experiments (by 40 % and 32 %, respectively). This difference may at least partly be due to the shorter wings of the juveniles tested in the wind tunnel during autumn. However, it seems unlikely that this can account for all of the large difference. It is suggested that wind tunnel experiments might overestimate birds' flight costs compared with free flight.


PLoS ONE ◽  
2015 ◽  
Vol 10 (6) ◽  
pp. e0129340 ◽  
Author(s):  
Keith A. Hobson ◽  
Kevin J. Kardynal ◽  
Steven L. Van Wilgenburg ◽  
Gretchen Albrecht ◽  
Antonio Salvadori ◽  
...  

2009 ◽  
Vol 23 (4) ◽  
pp. 800-808 ◽  
Author(s):  
Jean Secondi ◽  
Emeric Hinot ◽  
Zohra Djalout ◽  
Stéphane Sourice ◽  
Alain Jadas-Hécart

Sign in / Sign up

Export Citation Format

Share Document