scholarly journals Biallelic mutations in LAMA5 disrupts a skeletal noncanonical focal adhesion pathway and produces a distinct bent bone dysplasia

EBioMedicine ◽  
2020 ◽  
Vol 62 ◽  
pp. 103075 ◽  
Author(s):  
Maya Barad ◽  
Fabiana Csukasi ◽  
Michaela Bosakova ◽  
Jorge H. Martin ◽  
Wenjuan Zhang ◽  
...  
2009 ◽  
Vol 2009 ◽  
pp. 1-10 ◽  
Author(s):  
Kun-Nan Tsai ◽  
Err-Cheng Chan ◽  
Tsung-Yeh Tsai ◽  
Kuei-Tien Chen ◽  
Chun-Yu Chen ◽  
...  

To unravel the cytotoxic effect of the recombinant CFP-10/ESAT-6 protein (rCFES) on WI-38 cells, an integrative analysis approach, combining time-course microarray data and annotated pathway databases, was proposed with the emphasis on identifying the potentially crucial pathways. The potentially crucial pathways were selected based on a composite criterion characterizing the average significance and topological properties of important genes. The analysis results suggested that the regulatory effect of rCFES was at least involved in cell proliferation, cell motility, cell survival, and metabolisms of WI-38 cells. The survivability of WI-38 cells, in particular, was significantly decreased to 62% with 12.5 μMrCFES. Furthermore, the focal adhesion pathway was identified as the potentially most-crucial pathway and 58 of 65 important genes in this pathway were downregulated by rCFES treatment. Using qRT-PCR, we have confirmed the changes in the expression levels of LAMA4, PIK3R3, BIRC3, and NFKBIA, suggesting that these proteins may play an essential role in the cytotoxic process in the rCFES-treated WI-38 cells.


2017 ◽  
Vol 32 (suppl_3) ◽  
pp. iii107-iii107
Author(s):  
Andreas Kousios ◽  
Orthodoxia Nicolaou ◽  
Paraskevi Chairta ◽  
Andreas Hadjisavvas ◽  
Kyriakos Ioannou ◽  
...  

3 Biotech ◽  
2020 ◽  
Vol 10 (9) ◽  
Author(s):  
Huayun Huang ◽  
Longzhou Liu ◽  
Chunmiao Li ◽  
Zhong Liang ◽  
Zhenyang Huang ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Yan Xiong ◽  
Yuxue Wang ◽  
Qing Xu ◽  
An Li ◽  
Yongqi Yue ◽  
...  

Intramuscular fat (IMF) deposition is one of the most important factors to affect meat quality in livestock and induce insulin resistance and adverse metabolic phenotypes for humans. However, the key regulators involved in this process remain largely unknown. Although liver kinase B1 (LKB1) was reported to participate in the development of skeletal muscles and classical adipose tissues. Due to the specific autonomic location of intramuscular adipocytes, deposited between or within muscle bundles, the exact roles of LKB1 in IMF deposition need further verified. Here, we cloned the goat LKB1 coding sequence with 1,317 bp, encoding a 438 amino acid peptide. LKB1 was extensively expressed in detected tissues and displayed a trend from decline to rise during intramuscular adipogenesis. Functionally, knockdown of LKB1 by two individual siRNAs enhanced the intramuscular preadipocytes differentiation, accompanied by promoting lipid accumulation and inducing adipogenic transcriptional factors and triglyceride synthesis-related genes expression. Conversely, overexpression of LKB1 restrained these biological signatures. To further explore the mechanisms, the RNA-seq technique was performed to compare the difference between siLKB1 and the control group. There were 1,043 differential expression genes (DEGs) were screened, i.e., 425 upregulated genes and 618 downregulated genes in the siLKB1 group. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis predicted that the DEGs were mainly enriched in the focal adhesion pathway and its classical downstream signal, the PI3K-Akt signaling pathway. Specifically, knockdown of LKB1 increased the mRNA level of focal adhesion kinase (FAK) and vice versa in LKB1-overexpressed cells, a key component of the activated focal adhesion pathway. Convincingly, blocking this pathway by a specific FAK inhibitor (PF573228) rescued the observed phenotypes in LKB1 knockdown adipocytes. In conclusion, LKB1 inhibited goat intramuscular adipogenesis through the focal adhesion pathway. This work expanded the genetic regulator networks of IMF deposition and provided theoretical support for improving human health and meat quality from the aspect of IMF deposition.


Oncotarget ◽  
2015 ◽  
Vol 6 (15) ◽  
pp. 13295-13308 ◽  
Author(s):  
Sara Stigliani ◽  
Paola Scaruffi ◽  
Corrado Lagazio ◽  
Luca Persico ◽  
Barbara Carlini ◽  
...  

2020 ◽  
Vol 330 ◽  
pp. 80-89
Author(s):  
Yu Tian ◽  
Ming-Yu Zhang ◽  
Na Li ◽  
Jun-Jie Wang ◽  
Wei Ge ◽  
...  

Oncogene ◽  
2010 ◽  
Vol 29 (48) ◽  
pp. 6331-6342 ◽  
Author(s):  
S Ocak ◽  
H Yamashita ◽  
A R Udyavar ◽  
A N Miller ◽  
A L Gonzalez ◽  
...  

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