scholarly journals Pharmaco-omics data sheds light on therapy-oriented prospects of precision medicine

EBioMedicine ◽  
2021 ◽  
Vol 70 ◽  
pp. 103493
Author(s):  
Jie Zheng ◽  
Haiyun Wang
2018 ◽  
Vol 169 (3) ◽  
pp. 625-632 ◽  
Author(s):  
Bingbing Xie ◽  
Zifeng Yuan ◽  
Yadong Yang ◽  
Zhidan Sun ◽  
Shuigeng Zhou ◽  
...  

2020 ◽  
Vol 26 (31) ◽  
pp. 3783-3798
Author(s):  
Majid Assadi ◽  
Narges Jokar ◽  
Mojtaba Ghasemi ◽  
Iraj Nabipour ◽  
Ali Gholamrezanezhad ◽  
...  

Prostate cancer is the most prevalent type of cancer and the second cause of death in men worldwide. Various diagnostic and treatment procedures are available for this type of malignancy, but High-grade or locally advanced prostate cancers showed the potential to develop to lethal phase that can be causing dead. Therefore, new approaches are needed to prolong patients’ survival and to improve their quality of life. Precision medicine is a novel emerging field that plays an essential role in identifying new sub-classifications of diseases and in providing guidance in treatment that is based on individual multi-omics data. Multi-omics approaches include the use of genomics, transcriptomics, proteomics, metabolomics, epigenomics and phenomics data to unravel the complexity of a disease-associated biological network, to predict prognostic biomarkers, and to identify new targeted drugs for individual cancer patients. We review the impact of multi-omics data in the framework of systems biology in the era of precision medicine, emphasising the combination of molecular imaging modalities with highthroughput techniques and the new treatments that target metabolic pathways involved in prostate cancer.


Life ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 42
Author(s):  
Charlotte A. Nelson ◽  
Ana Uriarte Acuna ◽  
Amber M. Paul ◽  
Ryan T. Scott ◽  
Atul J. Butte ◽  
...  

There has long been an interest in understanding how the hazards from spaceflight may trigger or exacerbate human diseases. With the goal of advancing our knowledge on physiological changes during space travel, NASA GeneLab provides an open-source repository of multi-omics data from real and simulated spaceflight studies. Alone, this data enables identification of biological changes during spaceflight, but cannot infer how that may impact an astronaut at the phenotypic level. To bridge this gap, Scalable Precision Medicine Oriented Knowledge Engine (SPOKE), a heterogeneous knowledge graph connecting biological and clinical data from over 30 databases, was used in combination with GeneLab transcriptomic data from six studies. This integration identified critical symptoms and physiological changes incurred during spaceflight.


2020 ◽  
Vol 14 (1) ◽  
Author(s):  
Zeeshan Ahmed

Abstract Precision medicine aims to empower clinicians to predict the most appropriate course of action for patients with complex diseases like cancer, diabetes, cardiomyopathy, and COVID-19. With a progressive interpretation of the clinical, molecular, and genomic factors at play in diseases, more effective and personalized medical treatments are anticipated for many disorders. Understanding patient’s metabolomics and genetic make-up in conjunction with clinical data will significantly lead to determining predisposition, diagnostic, prognostic, and predictive biomarkers and paths ultimately providing optimal and personalized care for diverse, and targeted chronic and acute diseases. In clinical settings, we need to timely model clinical and multi-omics data to find statistical patterns across millions of features to identify underlying biologic pathways, modifiable risk factors, and actionable information that support early detection and prevention of complex disorders, and development of new therapies for better patient care. It is important to calculate quantitative phenotype measurements, evaluate variants in unique genes and interpret using ACMG guidelines, find frequency of pathogenic and likely pathogenic variants without disease indicators, and observe autosomal recessive carriers with a phenotype manifestation in metabolome. Next, ensuring security to reconcile noise, we need to build and train machine-learning prognostic models to meaningfully process multisource heterogeneous data to identify high-risk rare variants and make medically relevant predictions. The goal, today, is to facilitate implementation of mainstream precision medicine to improve the traditional symptom-driven practice of medicine, and allow earlier interventions using predictive diagnostics and tailoring better-personalized treatments. We strongly recommend automated implementation of cutting-edge technologies, utilizing machine learning (ML) and artificial intelligence (AI) approaches for the multimodal data aggregation, multifactor examination, development of knowledgebase of clinical predictors for decision support, and best strategies for dealing with relevant ethical issues.


2018 ◽  
Vol 9 ◽  
Author(s):  
Debajyoti Ghosh ◽  
Jonathan A. Bernstein ◽  
Gurjit K. Khurana Hershey ◽  
Marc E. Rothenberg ◽  
Tesfaye B. Mersha

Author(s):  
Saliha Ece Acuner-Ozbabacan

We are now in a data-driven biomedical era in which the aim of precision medicine is to collect, investigate and interpret the omics data effectively and integratively to be able to implement the results in healthcare with high accuracy. Recent promising applications show that molecularly classifying a disease into subpopulations is beneficial for both patients and drug developers.


IEEE Access ◽  
2021 ◽  
pp. 1-1
Author(s):  
S. Alberto Garcia ◽  
Ana Leon Palacio ◽  
Jose Fabian Reyes Roman ◽  
Juan Carlos Casamayor ◽  
Oscar Pastor

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