Permanent disability classification by combining evolutionary Generalized Radial Basis Function and logistic regression methods

2012 ◽  
Vol 39 (9) ◽  
pp. 8350-8355 ◽  
Author(s):  
A. Castaño ◽  
Francisco Fernández-Navarro ◽  
P.A. Gutiérrez ◽  
César Hervás-Martínez
2011 ◽  
Vol 22 (2) ◽  
pp. 246-263 ◽  
Author(s):  
Pedro Antonio Gutierrez ◽  
Cesar Hervas-Martinez ◽  
Francisco J. Martinez-Estudillo

2019 ◽  
Vol 40 (Supplement_1) ◽  
Author(s):  
C C Higa ◽  
M G Ciambrone ◽  
M J Gambarte ◽  
F Novo ◽  
I Nogues ◽  
...  

Abstract Background Global Registry of Acute Coronary Events (GRACE) score is a well-known model used to predict the probability of events in acute coronary syndrome (ACS). GRACE model was developed using a logistic regression approach that can only model linear functions, a limitation that could be prevented using artificial neural networks (NN) a recognized tool for nonlinear statistical modeling. The aim of this study was to develop, train and test different NN algorithm-based models to improve the GRACE score performance. Methods We analyzed a prospective database including 1,255 patients admitted with diagnosis of ACS in a community hospital, between June 2008 and June 2017. The database included 40 demographic and laboratory admission variables. In the guided approach, only the individual predictors included in the GRACE score were used to train and test three NN algorithm-based models, one- and two-hidden layer multilayer perceptron (MLP), and a radial basis function network. In addition, three extra unguided models were built using the 40 admission variables. Finally, expected mortality according to the GRACE score was calculated using the logistic regression equation. The database was split into 2 datasets: 70% for model training and 30% for validation. In order to choose the best model, the training process was repeated 50 times. Every time the models were tested on the validation cohort, accuracy, receiver operating characteristic (ROC) area, negative predictive value (NPV), and positive predictive value (PPV) were recorded. Only models showing the best discrimination power were selected for comparison with logistic regression outcomes. The end point was in-hospital all-cause mortality. Results In terms of accuracy, ROC area and NPV, almost all NN algorithms outperformed the logistic regression approach (accuracy 97.1, 96.7, 96.2, 97.3 and 94.1%, p<0.001; ROC area 0.89, 0.86, 0.84, 0.84 and 0.75, Hanley-McNeil p≤0.05; for guided and unguided one- and two-hidden layers MLP and GRACE score, respectively). Only radial basis function models obtained a better accuracy level based on NPV improvement (100 vs. 98.8%, p=0.0001), at the expense of PPV reduction (0.0% vs. 13.2%, p<0.0001) (ROC are 0.84 vs. 0.75, p=0.043). Compared with the logistic regression approach, one- and two-hidden layers in guided and unguided MLP models improved PPV from 13.2 to 18.2% (38% increase), 15.4% (17% increase), 27.3% (107% increase), and 25.0% (89% increase), respectively, although these differences were not statistically significant. Conclusions NN algorithms improve GRACE score performance in terms of discriminatory power for the prediction of in-hospital mortality. Its application should become a useful tool for the decision making in ACS patients


2010 ◽  
Vol 92 (3) ◽  
pp. 209-225 ◽  
Author(s):  
NANYE LONG ◽  
DANIEL GIANOLA ◽  
GUILHERME J. M. ROSA ◽  
KENT A. WEIGEL ◽  
ANDREAS KRANIS ◽  
...  

SummaryA challenge when predicting total genetic values for complex quantitative traits is that an unknown number of quantitative trait loci may affect phenotypes via cryptic interactions. If markers are available, assuming that their effects on phenotypes are additive may lead to poor predictive ability. Non-parametric radial basis function (RBF) regression, which does not assume a particular form of the genotype–phenotype relationship, was investigated here by simulation and analysis of body weight and food conversion rate data in broilers. The simulation included a toy example in which an arbitrary non-linear genotype–phenotype relationship was assumed, and five different scenarios representing different broad sense heritability levels (0·1, 0·25, 0·5, 0·75 and 0·9) were created. In addition, a whole genome simulation was carried out, in which three different gene action modes (pure additive, additive+dominance and pure epistasis) were considered. In all analyses, a training set was used to fit the model and a testing set was used to evaluate predictive performance. The latter was measured by correlation and predictive mean-squared error (PMSE) on the testing data. For comparison, a linear additive model known as Bayes A was used as benchmark. Two RBF models with single nucleotide polymorphism (SNP)-specific (RBF I) and common (RBF II) weights were examined. Results indicated that, in the presence of complex genotype–phenotype relationships (i.e. non-linearity and non-additivity), RBF outperformed Bayes A in predicting total genetic values using SNP markers. Extension of Bayes A to include all additive, dominance and epistatic effects could improve its prediction accuracy. RBF I was generally better than RBF II, and was able to identify relevant SNPs in the toy example.


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