Impact of direct application of biogas slurry and residue in fields: In situ analysis of antibiotic resistance genes from pig manure to fields

2018 ◽  
Vol 344 ◽  
pp. 441-449 ◽  
Author(s):  
Chengjun Pu ◽  
Hang Liu ◽  
Guochun Ding ◽  
Ying Sun ◽  
Xiaolu Yu ◽  
...  
2020 ◽  
Vol 27 (22) ◽  
pp. 28016-28029 ◽  
Author(s):  
Tina Van den Meersche ◽  
Geertrui Rasschaert ◽  
Thijs Vanden Nest ◽  
Freddy Haesebrouck ◽  
Lieve Herman ◽  
...  

2019 ◽  
Vol 252 ◽  
pp. 227-235 ◽  
Author(s):  
Shu-Yi-Dan Zhou ◽  
Dong Zhu ◽  
Madeline Giles ◽  
Xiao-Ru Yang ◽  
Tim Daniell ◽  
...  

2021 ◽  
Vol 233 ◽  
pp. 01130
Author(s):  
PAN Xin-rong ◽  
CHEN Lei ◽  
YU Heng ◽  
ZUO Jian-e

Antibiotic resistance genes (ARGs) existing in livestock and poultry manure have the risk to spread and proliferate. This might endanger people’s health. The common treatment of livestock and poultry manure is anaerobic digestion. But the change of ARGs during anaerobic digestion require further study, and the effect of digestate fertilization to the antibiotic resistance of cropland soil is still unclear. This study investigated the pig manure, biogas liquid, biogas residue, and cropland soils fertilized with and without digestate. The results showed that, the relative abundance of ARGs in biogas residue was much higher than other samples. The average relative abundance was 1.46×10-1 copy ratio (copy of ARG/copy of 16S rRNA gene), and the total relative abundance was 3.07 copy ratio. There were 21 ARGs detected in the 5 samples. 11 of them were shared by the 5 samples. The main ARGs were aminoglycoside, chloramphenicol, sulfonamide, tetracycline, and multidrug. Aminoglycoside had the highest relative abundance, and the total relative abundance in all samples was 1.18 copy ratio. Anaerobic digestion increased the total relative abundance of ARGs in pig manure from 1.14×10-1 to 1.70×10-1 copy ratio. Fertilization of digestate increased the total relative abundance of AGRs in soil from 3.27×10-1 to 7.29×10-1 copy ratio.


2018 ◽  
Author(s):  
Thibault Stalder ◽  
Max Press ◽  
Shawn Sullivan ◽  
Ivan Liachko ◽  
Eva M. Top

AbstractThe rapid spread of antibiotic resistance is a serious human health threat. A range of environments have been identified as reservoirs of the antibiotic resistance genes (ARGs) found in pathogens. However, we lack understanding of the origins of these ARGs and their spread from environment to clinic. This is partly due to our inability to identify the bacterial hosts of ARGs and the mobile genetic elements that mediate this spread, such as plasmids and integrons. Here we demonstrated that the in vivo proximity ligation method Hi-C can determine the in situ host range of ARGs, plasmids, and integrons in a wastewater sample by physically linking them to their host chromosomes. Hi-C detected both previously known and novel associations between ARGs, mobile elements and host genomes, mostly validating this method. A better identification of the natural carriers of ARGs will aid the development of strategies to limit resistance spread to pathogens.


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