scholarly journals Dissolved inorganic nutrients and organic substrates in the River Warnow (North-Eastern Germany) – Utilisation by bacterioplankton

Limnologica ◽  
2007 ◽  
Vol 37 (3) ◽  
pp. 264-277 ◽  
Author(s):  
Heike M. Freese ◽  
Solvig Görs ◽  
Ulf Karsten ◽  
Rhena Schumann
2021 ◽  
Vol 9 (7) ◽  
pp. 1345
Author(s):  
Stefan E. Heiden ◽  
Katharina Sydow ◽  
Stephan Schaefer ◽  
Ingo Klempien ◽  
Veronika Balau ◽  
...  

The emergence of carbapenemase-producing Enterobacteriaceae limits therapeutic options and presents a major public health problem. Resistances to carbapenems are mostly conveyed by metallo-beta-lactamases (MBL) including VIM, which are often encoded on resistance plasmids. We characterized four VIM-positive isolates that were obtained as part of a routine diagnostic screening from two laboratories in north-eastern Germany between June and August 2020. Whole-genome sequencing was performed to address (a) phylogenetic properties, (b) plasmid content, and (c) resistance gene carriage. In addition, we performed phenotypic antibiotic and mercury resistance analyses. The genomic analysis revealed three different bacterial species including C. freundii, E. coli and K. oxytoca with four different sequence types. All isolates were geno- and phenotypically multidrug-resistant (MDR) and the phenotypic profile was explained by the underlying resistance gene content. Three isolates of four carried nearly identical VIM-1-resistance plasmids, which in addition encoded a mercury resistance operon and showed some similarity to two publicly available plasmid sequences from sources other than the two laboratories above. Our results highlight the circulation of a nearly identical IncN-type VIM-1-resistance plasmid in different Enterobacteriaceae in north-eastern Germany.


The Holocene ◽  
2016 ◽  
Vol 26 (6) ◽  
pp. 935-946 ◽  
Author(s):  
Markus Czymzik ◽  
Stefan Dreibrodt ◽  
Ingo Feeser ◽  
Florian Adolphi ◽  
Achim Brauer

2019 ◽  
Author(s):  
Malek Belgacem ◽  
Jacopo Chiggiato ◽  
Mireno Borghini ◽  
Bruno Pavoni ◽  
Gabriella Cerrati ◽  
...  

Abstract. Long-term time-series are a fundamental prerequisite to understand and detect climate shifts and trends. Understanding the complex interplay of changing ocean variables and the biological implication for marine ecosystems requires extensive data collection for monitoring and hypothesis testing and validation of modelling products. In marginal seas, such as Mediterranean Sea, there are still monitoring gaps, both in time and in space. To contribute filling these gaps, an extensive dataset of dissolved inorganic nutrients profiles (nitrate, NO3; phosphate, PO43−; and silicate, SiO2) have been collected between 2004 and 2017 in the Western Mediterranean Sea and subjected to quality control techniques to provide to the scientific community a publicly available, long-term, quality controlled, internally consistent biogeochemical data product. The database includes 870 stations of dissolved inorganic nutrients sampled during 24 cruises, including temperature and salinity. Details of the quality control (primary and secondary quality control) applied are reported. The data are available in PANGAEA (https://doi.org/10.1594/PANGAEA.904172, Belgacem et al. 2019).


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