Genetic analysis of maintenance of pEC156, a naturally occurring Escherichia coli plasmid that carries genes of the EcoVIII restriction–modification system

Plasmid ◽  
2015 ◽  
Vol 77 ◽  
pp. 39-50 ◽  
Author(s):  
Olesia Werbowy ◽  
Robert Boratynski ◽  
Agnieszka Dekowska ◽  
Tadeusz Kaczorowski
Gene ◽  
1991 ◽  
Vol 97 (1) ◽  
pp. 97-102 ◽  
Author(s):  
Alan W. Hammond ◽  
Gary F. Gerard ◽  
Deb K. Chatterjee

2004 ◽  
Vol 70 (9) ◽  
pp. 5546-5556 ◽  
Author(s):  
Jonathan O'Driscoll ◽  
Frances Glynn ◽  
Oonagh Cahalane ◽  
Mary O'Connell-Motherway ◽  
Gerald F. Fitzgerald ◽  
...  

ABSTRACT A novel restriction-modification system, designated LlaJI, was identified on pNP40, a naturally occurring 65-kb plasmid from Lactococcus lactis. The system comprises four adjacent similarly oriented genes that are predicted to encode two m5C methylases and two restriction endonucleases. The LlaJI system, when cloned into a low-copy-number vector, was shown to confer resistance against representatives of the three most common lactococcal phage species. This phage resistance phenotype was found to be strongly temperature dependent, being most effective at 19°C. A functional analysis confirmed that the predicted methylase-encoding genes, llaJIM1 and llaJIM2, were both required to mediate complete methylation, while the assumed restriction enzymes, specified by llaJIR1 and llaJIR2, were both necessary for the complete restriction phenotype. A Northern blot analysis revealed that the four LlaJI genes are part of a 6-kb operon and that the relative abundance of the LlaJI-specific mRNA in the cells does not appear to contribute to the observed temperature-sensitive profile. This was substantiated by use of a LlaJI promoter-lacZ fusion, which further revealed that the LlaJI operon appears to be subject to transcriptional regulation by an as yet unidentified element(s) encoded by pNP40.


2014 ◽  
Vol 197 (2) ◽  
pp. 337-342 ◽  
Author(s):  
Louise Roer ◽  
Frank M. Aarestrup ◽  
Henrik Hasman

The rapid evolution of bacteria is crucial to their survival and is caused by exchange, transfer, and uptake of DNA, among other things. Conjugation is one of the main mechanisms by which bacteria share their DNA, and it is thought to be controlled by varied bacterial immune systems. Contradictory results about restriction-modification systems based on phenotypic studies have been presented as reasons for a barrier to conjugation with and other means of uptake of exogenous DNA. In this study, we show that inactivation of the R.EcoKI restriction enzyme in strainEscherichia coliK-12 strain MG1655 increases the conjugational transfer of plasmid pOLA52, which carriers two EcoKI recognition sites. Interestingly, the results were not absolute, and uptake of unmethylated pOLA52 was still observed in the wild-type strain (with an intacthsdRgene) but at a reduction of 85% compared to the uptake of the mutant recipient with a disruptedhsdRgene. This leads to the conclusion that EcoKI restriction-modification affects the uptake of DNA by conjugation but is not a major barrier to plasmid transfer.


2010 ◽  
Vol 76 (12) ◽  
pp. 4092-4095 ◽  
Author(s):  
Ayumi Matsumoto ◽  
Michele M. Igo

ABSTRACT The transformation efficiency of Xylella fastidiosa can be increased by interfering with restriction by the strain-specific type II system encoded by the PD1607 and PD1608 genes. Here, we report results for two strategies: in vitro methylation using M.SssI and isolation of DNA from an Escherichia coli strain expressing the methylase PD1607.


Gene ◽  
1995 ◽  
Vol 157 (1-2) ◽  
pp. 231-232 ◽  
Author(s):  
Miguel A. Alvarez ◽  
Ana Gomez ◽  
Pilar Gomez ◽  
M.Rosario Rodicio

2000 ◽  
Vol 182 (4) ◽  
pp. 1176-1180 ◽  
Author(s):  
Susan Kinder Haake ◽  
Sean C. Yoder ◽  
Gwynne Attarian ◽  
Kara Podkaminer

ABSTRACT Three native plasmids of Fusobacterium nucleatum were characterized, including DNA sequence analysis of one plasmid, pFN1. A shuttle plasmid, pHS17, capable of transforming Escherichia coli and F. nucleatum ATCC 10953 was constructed with pFN1. pHS17 was stably maintained in the F. nucleatum transformants, and differences in the transformation efficiencies suggested the presence of a restriction-modification system in F. nucleatum.


Gene ◽  
1996 ◽  
Vol 172 (1) ◽  
pp. 41-46 ◽  
Author(s):  
Hans-Martin Striebel ◽  
Stefan Seeber ◽  
Michael Jarsch ◽  
Christoph Kessler

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