Metagenomic analysis exploring microbial assemblages and functional genes potentially involved in di (2-ethylhexyl) phthalate degradation in soil

2020 ◽  
Vol 715 ◽  
pp. 137037 ◽  
Author(s):  
Fengxiao Zhu ◽  
Evelyn Doyle ◽  
Changyin Zhu ◽  
Dongmei Zhou ◽  
Cheng Gu ◽  
...  
2018 ◽  
Author(s):  
Jicheng Yu ◽  
Chao Chen ◽  
Changjian Liu ◽  
Dongning Yu ◽  
Shuai Chen ◽  
...  

AbstractBiostimulation by addition nutrients has been proved to be an effective bioremediation strategies. Revealing response law of nitrogen source and structure characteristics of anaerobic petroleum degrading microorganisms microbial population will help us optimize nutrient to promote oil degradation. Anaerobic micro-consortia characteristics in the enrichment marine sediment samples with different nitrogen source, combining with analysis of the oil degradation rates were studied in this paper, as well as functional genes involved in petroleum degradation were also analyzed. On the basis of optimizing the best inorganic nitrogen sources and organic nitrogen sources, an effective medium was designed by response surface methodology that used for enriching petroleum degradation micro-consortia. Amplicon sequencing analysis showed that the population of microorganisms migrated obviously when enriched with different nitrogen sources. With the increase of oil degradation rate, the microbial diversity was significantly decreased, and concentrated on a limited number of genera. The reasonable proportions of GammaProteobacteria, Bacteroidetes and Fusobacteria made the greatest contribution to petroleum degradation. Metagenomic analysis unveiled the mixed nitrogen source promoted the expression of functional genes related to petroleum degradation such as the transfer of succinyl-CoA, synthesis of acetyl CoA and β-oxidation cycle, and was beneficial to degradation of petroleum at low temperature anaerobic condition.Originality Significance StatementAddition of nutrients can promote growth of indigenous petroleum degradation-related bacteria and be helpful to the rapid degradation of petroleum. Previous studies accurately characterized aerobic microorganisms on petroleum degradation. However, we still known little about anaerobic microorganisms in marine environment. Most biostimulation methods use inorganic salt as the main nutritional supplement to improve the efficiency of petroleum degradation, but effects of different nitrogen sources on diversity of microorganisms and distribution of functional genes related to petroleum degradation at anaerobic conditions are still unknown. In this research, the effects of nitrogen on petroleum biodegradation, anaerobic microconsortium structure and distribution of genes related to petroleum degradation were unveiled by using amplicon sequencing and metagenomic analysis.


2021 ◽  
Vol 408 ◽  
pp. 124880
Author(s):  
Xiaodong Zhao ◽  
Xiaojing Li ◽  
Yue Li ◽  
Xiaolin Zhang ◽  
Feihong Zhai ◽  
...  

2019 ◽  
Vol 10 (5) ◽  
pp. 2618-2629 ◽  
Author(s):  
Haiyan Xu ◽  
Feiyan Zhao ◽  
Qiangchuan Hou ◽  
Weiqiang Huang ◽  
Yahua Liu ◽  
...  

Probiotics-induced potentially beneficial changes in the gut microbiota and its functional genes of diarrhoeal dogs, suggesting probiotics improve health through regulation of the gut microbiota.


2016 ◽  
Vol 318 ◽  
pp. 702-710 ◽  
Author(s):  
German Zafra ◽  
Todd D. Taylor ◽  
Angel E. Absalón ◽  
Diana V. Cortés-Espinosa

2000 ◽  
Vol 86 (2) ◽  
pp. 92-100 ◽  
Author(s):  
Majken DalgaardNote ◽  
Grete Ostergaard ◽  
Henrik Rye Lam ◽  
Ernst V. Hansen ◽  
Ole Ladefoged

2010 ◽  
Vol 58 (S 01) ◽  
Author(s):  
S Eigeldinger-Berthou ◽  
P Buntschu ◽  
A Frobert ◽  
S Cook ◽  
MN Giraud ◽  
...  

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