Methanobacterium thermoflexum sp. nov. and Methanobacterium defluvii sp. nov., Thermophilic Rod-Shaped Methanogens Isolated from Anaerobic Digestor Sludge

1993 ◽  
Vol 16 (3) ◽  
pp. 427-435 ◽  
Author(s):  
S.V. Kotelnikova ◽  
A.Ya. Obraztsova ◽  
G.M. Gongadze ◽  
K.S. Laurinavichius
Keyword(s):  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Christopher Quince ◽  
Sergey Nurk ◽  
Sebastien Raguideau ◽  
Robert James ◽  
Orkun S. Soyer ◽  
...  

AbstractWe introduce STrain Resolution ON assembly Graphs (STRONG), which identifies strains de novo, from multiple metagenome samples. STRONG performs coassembly, and binning into metagenome assembled genomes (MAGs), and stores the coassembly graph prior to variant simplification. This enables the subgraphs and their unitig per-sample coverages, for individual single-copy core genes (SCGs) in each MAG, to be extracted. A Bayesian algorithm, BayesPaths, determines the number of strains present, their haplotypes or sequences on the SCGs, and abundances. STRONG is validated using synthetic communities and for a real anaerobic digestor time series generates haplotypes that match those observed from long Nanopore reads.


2020 ◽  
Author(s):  
Esther Ososanya ◽  
Abiose Adebayo ◽  
Jean-Pierre Fodjouo ◽  
Steven Omoijuanfo ◽  
Francis Ayissi ◽  
...  

1999 ◽  
Vol 3 (3) ◽  
pp. 171-183 ◽  
Author(s):  
Antoine Genovesi ◽  
Jérôme Harmand ◽  
Jean-Philippe Steyer

1992 ◽  
Vol 25 (2) ◽  
pp. 191-194 ◽  
Author(s):  
J. Alvarez ◽  
O. Monroy ◽  
V. Ruiz

2002 ◽  
Vol 18 (4) ◽  
pp. 898-903 ◽  
Author(s):  
B. Tartakovsky ◽  
E. Morel ◽  
J.P. Steyer ◽  
S.R. Guiot

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