scholarly journals NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

Author(s):  
Hyun Woo Kim ◽  
Mingxun Wang ◽  
Christopher A. Leber ◽  
Louis-Félix Nothias ◽  
Raphael Reher ◽  
...  
Author(s):  
Hyunwoo kim ◽  
Mingxun Wang ◽  
Christopher Leber ◽  
Louis-Felix Nothias ◽  
Raphael Reher ◽  
...  

<div> <div> <div> <p>Computational approaches such as genome and metabolome mining are becoming essential to natural products (NP) research. Consequently, demands for automated NP classification system for massive data are increasing. The semantic ontology of NPs classifies molecules based on the taxonomy of the producing organism, the nature of the biosynthetic pathway, their biological properties, as well as the presence of chemical substructures. Thus, a holistic and automatic NP classification framework could have considerable value to comprehensively navigate the relatedness of NPs. Here, we introduce NPClassifier, the first deep-learning tool for the automated structural classification of NPs. We expect that NPClassifier will accelerate NP discovery by facilitating and enabling large-scale genome and metabolome mining efforts and linking of NP structures to their underlying bioactivity. </p> </div> </div> </div>


2020 ◽  
Author(s):  
Hyunwoo kim ◽  
Mingxun Wang ◽  
Christopher Leber ◽  
Louis-Felix Nothias ◽  
Raphael Reher ◽  
...  

<div> <div> <div> <p>Computational approaches such as genome and metabolome mining are becoming essential to natural products (NP) research. Consequently, demands for automated NP classification system for massive data are increasing. The semantic ontology of NPs classifies molecules based on the taxonomy of the producing organism, the nature of the biosynthetic pathway, their biological properties, as well as the presence of chemical substructures. Thus, a holistic and automatic NP classification framework could have considerable value to comprehensively navigate the relatedness of NPs. Here, we introduce NPClassifier, the first deep-learning tool for the automated structural classification of NPs. We expect that NPClassifier will accelerate NP discovery by facilitating and enabling large-scale genome and metabolome mining efforts and linking of NP structures to their underlying bioactivity. </p> </div> </div> </div>


Author(s):  
David T. Wang ◽  
Brady Williamson ◽  
Thomas Eluvathingal ◽  
Bruce Mahoney ◽  
Jennifer Scheler

Author(s):  
P.L. Nikolaev

This article deals with method of binary classification of images with small text on them Classification is based on the fact that the text can have 2 directions – it can be positioned horizontally and read from left to right or it can be turned 180 degrees so the image must be rotated to read the sign. This type of text can be found on the covers of a variety of books, so in case of recognizing the covers, it is necessary first to determine the direction of the text before we will directly recognize it. The article suggests the development of a deep neural network for determination of the text position in the context of book covers recognizing. The results of training and testing of a convolutional neural network on synthetic data as well as the examples of the network functioning on the real data are presented.


2020 ◽  
Author(s):  
Ala Supriya ◽  
Chiluka Venkat ◽  
Aliketti Deepak ◽  
GV Hari Prasad

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