scholarly journals Screening of Protein Crystallization Conditions on a Microfluidic Chip Using Nanoliter-Size Droplets

2003 ◽  
Vol 125 (37) ◽  
pp. 11170-11171 ◽  
Author(s):  
Bo Zheng ◽  
L. Spencer Roach ◽  
Rustem F. Ismagilov
Author(s):  
Sandy Morais ◽  
Gérald Clisson ◽  
Teresa Fina Mastropietro ◽  
Maria L. Briuglia ◽  
Joop H. ter Horst ◽  
...  

Crystals ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 1166
Author(s):  
Crissy L. Tarver ◽  
Qunying Yuan ◽  
Marc L. Pusey

Among its attributes, the mythical philosopher’s stone is supposedly capable of turning base metals to gold or silver. In an analogous fashion, we are finding that protein crystallization optimization using ionic liquids (ILs) often results in the conversion of base protein precipitate to crystals. Recombinant inorganic pyrophosphatases (8 of the 11 proteins) from pathogenic bacteria as well as several other proteins were tested for optimization by 23 ILs, plus a dH2O control, at IL concentrations of 0.1, 0.2, and 0.4 M. The ILs were used as additives, and all proteins were crystallized in the presence of at least one IL. For 9 of the 11 proteins, precipitation conditions were converted to crystals with at least one IL. The ILs could be ranked in order of effectiveness, and it was found that ~83% of the precipitation-derived crystallization conditions could be obtained with a suite of just eight ILs, with the top two ILs accounting for ~50% of the hits. Structural trends were found in the effectiveness of the ILs, with shorter-alkyl-chain ILs being more effective. The two top ILs, accounting for ~50% of the unique crystallization results, were choline dihydrogen phosphate and 1-butyl-3-methylimidazolium tetrafluoroborate. Curiously, however, a butyl group was present on the cation of four of the top eight ILs.


2005 ◽  
Vol 44 (6A) ◽  
pp. 4080-4083 ◽  
Author(s):  
Hiroaki Adachi ◽  
Ai Niino ◽  
Kazufumi Takano ◽  
Hiroyoshi Matsumura ◽  
Satoshi Murakami ◽  
...  

2020 ◽  
Vol 20 (7) ◽  
pp. 4325-4334
Author(s):  
Sankhya Bhattacharya ◽  
Pijus Kundu ◽  
J.S. Liu ◽  
Wen-Ching Wang ◽  
Fan-Gang Tseng

Crystals ◽  
2020 ◽  
Vol 10 (2) ◽  
pp. 78
Author(s):  
Yoshinobu Hashizume ◽  
Koji Inaka ◽  
Naoki Furubayashi ◽  
Masayuki Kamo ◽  
Sachiko Takahashi ◽  
...  

In this paper, we present a summary on how to obtain protein crystals from which better diffraction images can be produced. In particular, we describe, in detail, quality evaluation of the protein sample, the crystallization conditions and methods, flash-cooling protection of the crystal, and crystallization under a microgravity environment. Our approach to protein crystallization relies on a theoretical understanding of the mechanisms of crystal growth. They are useful not only for space experiments, but also for crystallization in the laboratory.


2009 ◽  
Vol 66 (1) ◽  
pp. 44-50 ◽  
Author(s):  
Mads Gabrielsen ◽  
Lisa A. Nagy ◽  
Lawrence J. DeLucas ◽  
Richard J. Cogdell

The second virial coefficient, orBvalue, is a measurement of how well a protein interacts with itself in solution. These interactions can lead to protein crystallization or precipitation, depending on their strength, with a narrow range ofBvalues (the `crystallization slot') being known to promote crystallization. A convenient method of determining theBvalue is by self-interaction chromatography. This paper describes how the light-harvesting complex 1–reaction centre core complex fromAllochromatium vinosumyielded single straight-edged crystals after iterative cycles of self-interaction chromatography and crystallization. This process allowed the rapid screening of small molecules and detergents as crystallization additives. Here, a description is given of how self-interaction chromatography has been utilized to improve the crystallization conditions of a membrane protein.


IUCrJ ◽  
2017 ◽  
Vol 4 (4) ◽  
pp. 400-410 ◽  
Author(s):  
Gabriela Kovácsová ◽  
Marie Luise Grünbein ◽  
Marco Kloos ◽  
Thomas R. M. Barends ◽  
Ramona Schlesinger ◽  
...  

Serial (femtosecond) crystallography at synchrotron and X-ray free-electron laser (XFEL) sources distributes the absorbed radiation dose over all crystals used for data collection and therefore allows measurement of radiation damage prone systems, including the use of microcrystals for room-temperature measurements. Serial crystallography relies on fast and efficient exchange of crystals upon X-ray exposure, which can be achieved using a variety of methods, including various injection techniques. The latter vary significantly in their flow rates – gas dynamic virtual nozzle based injectors provide very thin fast-flowing jets, whereas high-viscosity extrusion injectors produce much thicker streams with flow rates two to three orders of magnitude lower. High-viscosity extrusion results in much lower sample consumption, as its sample delivery speed is commensurate both with typical XFEL repetition rates and with data acquisition rates at synchrotron sources. An obvious viscous injection medium is lipidic cubic phase (LCP) as it is used forin mesomembrane protein crystallization. However, LCP has limited compatibility with many crystallization conditions. While a few other viscous media have been described in the literature, there is an ongoing need to identify additional injection media for crystal embedding. Critical attributes are reliable injection properties and a broad chemical compatibility to accommodate samples as heterogeneous and sensitive as protein crystals. Here, the use of two novel hydrogels as viscous injection matrices is described, namely sodium carboxymethyl cellulose and the thermo-reversible block polymer Pluronic F-127. Both are compatible with various crystallization conditions and yield acceptable X-ray background. The stability and velocity of the extruded stream were also analysed and the dependence of the stream velocity on the flow rate was measured. In contrast with previously characterized injection media, both new matrices afford very stable adjustable streams suitable for time-resolved measurements.


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