Evidence of Impurities in Thiolated Single-Stranded DNA Oligomers and Their Effect on DNA Self-Assembly on Gold

Langmuir ◽  
2005 ◽  
Vol 21 (11) ◽  
pp. 5134-5141 ◽  
Author(s):  
Chi-Ying Lee ◽  
Heather E. Canavan ◽  
Lara J. Gamble ◽  
David G. Castner
Keyword(s):  
Self Assembly ◽  
Single Stranded Dna ◽  
Dna Oligomers

scholarly journals DNA driven self-assembly of micron-sized rods using DNA-grafted bacteriophage fd virions

2015 ◽  
Vol 17 (12) ◽  
pp. 8194-8202 ◽  
Author(s):  
R. R. Unwin ◽  
R. A. Cabanas ◽  
T. Yanagishima ◽  
T. R. Blower ◽  
H. Takahashi ◽  
...  
Keyword(s):  
Aspect Ratio ◽  
High Aspect Ratio ◽  
Self Assembly ◽  
Single Stranded Dna ◽  
Dna Oligomers

We observe aggregation of high aspect ratio, semi-flexible viral rods functionalized with complementary, single-stranded DNA oligomers.

Kinetically Controlled Self-Assembly of DNA Oligomers

2009 ◽  
Vol 131 (7) ◽  
pp. 2422-2423 ◽  
Author(s):  
Daniel Lubrich ◽  
Simon J. Green ◽  
Andrew J. Turberfield
Keyword(s):  
Self Assembly ◽  
Dna Oligomers ◽  
Kinetically Controlled

scholarly journals Liquid crystal self-assembly of random-sequence DNA oligomers

2012 ◽  
Vol 109 (4) ◽  
pp. 1110-1115 ◽  
Author(s):  
T. Bellini ◽  
G. Zanchetta ◽  
T. P. Fraccia ◽  
R. Cerbino ◽  
E. Tsai ◽  
...  
Keyword(s):  
Liquid Crystal ◽  
Self Assembly ◽  
Random Sequence ◽  
Dna Oligomers

scholarly journals Linker-mediated self-assembly of mobile DNA-coated colloids

2020 ◽  
Vol 6 (21) ◽  
pp. eaaz6921 ◽  
Author(s):  
Xiuyang Xia ◽  
Hao Hu ◽  
Massimo Pica Ciamarra ◽  
Ran Ni
Keyword(s):  
Self Assembly ◽  
Effective Interaction ◽  
Mean Field Theory ◽  
Mean Field ◽  
Mobile Dna ◽  
Complementary Sequence ◽  
Single Stranded Dna ◽  
Construction Methods ◽  
Free Dna ◽  
Innovative System

Developing construction methods of materials tailored for given applications with absolute control over building block placement poses an immense challenge. DNA-coated colloids offer the possibility of realising programmable self-assembly, which, in principle, can assemble almost any structure in equilibrium, but remains challenging experimentally. Here, we propose an innovative system of linker-mediated mobile DNA-coated colloids (mDNACCs), in which mDNACCs are bridged by the free DNA linkers in solution, whose two single-stranded DNA tails can bind with specific single-stranded DNA receptors of complementary sequence coated on colloids. We formulate a mean-field theory efficiently calculating the effective interaction between mDNACCs, where the entropy of DNA linkers plays a nontrivial role. Particularly, when the binding between free DNA linkers in solution and the corresponding receptors on mDNACCs is strong, the linker-mediated colloidal interaction is determined by the linker entropy depending on the linker concentration.

Oligomer Length Defines the Self-Assembly of Single-Stranded DNA–Collagen Complex Fibers

2019 ◽  
Vol 6 (1) ◽  
pp. 213-218 ◽  
Author(s):  
Bryan D. James ◽  
Sophia Saenz ◽  
Anastacia van Gent ◽  
Josephine B. Allen
Keyword(s):  
Self Assembly ◽  
The Self ◽  
Single Stranded Dna

Effect of monovalent cations (Li+, Na+, K+, Cs+) on self-assembly of thiol-modified double-stranded and single-stranded DNA on gold electrode

The Analyst ◽  
2012 ◽  
Vol 137 (7) ◽  
pp. 1680 ◽  
Author(s):  
Zhiguo Li ◽  
Tianxing Niu ◽  
Zhenjiang Zhang ◽  
Guiying Feng ◽  
Shuping Bi
Keyword(s):  
Self Assembly ◽  
Gold Electrode ◽  
Monovalent Cations ◽  
Single Stranded Dna

Thermodynamics of complex structures formed between single-stranded DNA oligomers and the KH domains of the far upstream element binding protein

2016 ◽  
Vol 144 (20) ◽  
pp. 205105 ◽  
Author(s):  
Kaushik Chakraborty ◽  
Sudipta Kumar Sinha ◽  
Sanjoy Bandyopadhyay
Keyword(s):  
Binding Protein ◽  
Complex Structures ◽  
Single Stranded Dna ◽  
Dna Oligomers ◽  
Element Binding Protein ◽  
Upstream Element

Single-Stranded DNA Functionalized Single-Walled Carbon Nanotubes for Microbiosensors via Layer-by-Layer Electrostatic Self-Assembly

2014 ◽  
Vol 6 (6) ◽  
pp. 3784-3789 ◽  
Author(s):  
Zhuo Kang ◽  
Xiaoqin Yan ◽  
Yue Zhang ◽  
Jing Pan ◽  
Jin Shi ◽  
...  
Keyword(s):  
Carbon Nanotubes ◽  
Self Assembly ◽  
Single Walled Carbon Nanotubes ◽  
Layer By Layer ◽  
Single Stranded Dna ◽  
Single Walled Carbon ◽  
Walled Carbon Nanotubes

scholarly journals The Importance of Coulombic End Effects: Experimental Characterization of the Effects of Oligonucleotide Flanking Charges on the Strength and Salt Dependence of Oligocation (L8+) Binding to Single-Stranded DNA Oligomers

1999 ◽  
Vol 76 (2) ◽  
pp. 1008-1017 ◽  
Author(s):  
Wentao Zhang ◽  
Haihong Ni ◽  
Michael W. Capp ◽  
Charles F. Anderson ◽  
Timothy M. Lohman ◽  
...  
Keyword(s):  
Experimental Characterization ◽  
End Effects ◽  
Single Stranded Dna ◽  
Dna Oligomers ◽  
Salt Dependence

The adsorption of short single-stranded DNA oligomers to mineral surfaces

Chemosphere ◽  
2011 ◽  
Vol 83 (11) ◽  
pp. 1560-1567 ◽  
Author(s):  
H. James Cleaves ◽  
Ellen Crapster-Pregont ◽  
Caroline M. Jonsson ◽  
Christopher L. Jonsson ◽  
Dimitri A. Sverjensky ◽  
...  
Keyword(s):  
Mineral Surfaces ◽  
Single Stranded Dna ◽  
Dna Oligomers
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