scholarly journals In vivo protein interaction network analysis reveals porin-localized antibiotic inactivation in Acinetobacter baumannii strain AB5075

2016 ◽  
Vol 7 (1) ◽  
Author(s):  
Xia Wu ◽  
Juan D. Chavez ◽  
Devin K. Schweppe ◽  
Chunxiang Zheng ◽  
Chad R. Weisbrod ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Acinetobacter Baumannii ◽  
Outer Membrane ◽  
Protein Interaction ◽  
Protein Interaction Network ◽  
Outer Membrane Proteins ◽  
Interaction Network ◽  
Resistance Mechanisms ◽  
Clinical Strain

Abstract The nosocomial pathogen Acinetobacter baumannii is a frequent cause of hospital-acquired infections worldwide and is a challenge for treatment due to its evolved resistance to antibiotics, including carbapenems. Here, to gain insight on A. baumannii antibiotic resistance mechanisms, we analyse the protein interaction network of a multidrug-resistant A. baumannii clinical strain (AB5075). Using in vivo chemical cross-linking and mass spectrometry, we identify 2,068 non-redundant cross-linked peptide pairs containing 245 intra- and 398 inter-molecular interactions. Outer membrane proteins OmpA and YiaD, and carbapenemase Oxa-23 are hubs of the identified interaction network. Eighteen novel interactors of Oxa-23 are identified. Interactions of Oxa-23 with outer membrane porins OmpA and CarO are verified with co-immunoprecipitation analysis. Furthermore, transposon mutagenesis of oxa-23 or interactors of Oxa-23 demonstrates changes in meropenem or imipenem sensitivity in strain AB5075. These results provide a view of porin-localized antibiotic inactivation and increase understanding of bacterial antibiotic resistance mechanisms.

scholarly journals Clinically Relevant Gram-Negative Resistance Mechanisms Have No Effect on the Efficacy of MC-1, a Novel Siderophore-Conjugated Monocarbam

2012 ◽  
Vol 56 (12) ◽  
pp. 6334-6342 ◽  
Author(s):  
Craig J. McPherson ◽  
Lisa M. Aschenbrenner ◽  
Brian M. Lacey ◽  
Kelly C. Fahnoe ◽  
Margaret M. Lemmon ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Outer Membrane ◽  
Negative Resistance ◽  
Multidrug Resistant ◽  
Resistance Mechanisms ◽  
Gram Negative ◽  
Content Type ◽  
Pharmacologically Active

ABSTRACTThe incidence of hospital-acquired infections with multidrug-resistant (MDR) Gram-negative pathogens is increasing at an alarming rate. Equally alarming is the overall lack of efficacious therapeutic options for clinicians, which is due primarily to the acquisition and development of various antibiotic resistance mechanisms that render these drugs ineffective. Among these mechanisms is the reduced permeability of the outer membrane, which prevents many marketed antibiotics from traversing this barrier. To circumvent this, recent drug discovery efforts have focused on conjugating a siderophore moiety to a pharmacologically active compound that has been designed to hijack the bacterial siderophore transport system and trick cells into importing the active drug by recognizing it as a nutritionally beneficial compound. MC-1, a novel siderophore-conjugated β-lactam that promotes its own uptake into bacteria, has exquisite activity against many Gram-negative pathogens. While the inclusion of the siderophore was originally designed to facilitate outer membrane penetration into Gram-negative cells, here we show that this structural moiety also renders other clinically relevant antibiotic resistance mechanisms unable to affect MC-1 efficacy. Resistance frequency determinations and subsequent characterization of first-step resistant mutants identified PiuA, a TonB-dependent outer membrane siderophore receptor, as the primary means of MC-1 entry intoPseudomonas aeruginosa. While the MICs of these mutants were increased 32-fold relative to the parental strainin vitro, we show that this resistance phenotype is not relevantin vivo, as alternative siderophore-mediated uptake mechanisms compensated for the loss of PiuA under iron-limiting conditions.

Analysis and Prediction of Protein Interaction Network ofRalstonia solanacearum

2012 ◽  
Vol 18 (1) ◽  
pp. 139
Author(s):  
Chunlei JIANG ◽  
rui ZHAO ◽  
Lingfeng Lü ◽  
Dairong QIAO ◽  
Yi CAO
Keyword(s):  
Protein Interaction ◽  
Protein Interaction Network ◽  
Interaction Network
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