scholarly journals Potato guard cells respond to drying soil by a complex change in the expression of genes related to carbon metabolism and turgor regulation

1997 ◽  
Vol 11 (4) ◽  
pp. 871-882 ◽  
Author(s):  
Joachim Kopka ◽  
Nicholas J. Provart ◽  
Bernd Muller-Rober
2004 ◽  
Vol 186 (5) ◽  
pp. 1337-1344 ◽  
Author(s):  
Gracia Morales ◽  
Juan Francisco Linares ◽  
Ana Beloso ◽  
Juan Pablo Albar ◽  
José Luis Martínez ◽  
...  

ABSTRACT The Crc protein is involved in the repression of several catabolic pathways for the assimilation of some sugars, nitrogenated compounds, and hydrocarbons in Pseudomonas putida and Pseudomonas aeruginosa when other preferred carbon sources are present in the culture medium (catabolic repression). Crc appears to be a component of a signal transduction pathway modulating carbon metabolism in pseudomonads, although its mode of action is unknown. To better understand the role of Crc, the proteome profile of two otherwise isogenic P. putida strains containing either a wild-type or an inactivated crc allele was compared. The results showed that Crc is involved in the catabolic repression of the hpd and hmgA genes from the homogentisate pathway, one of the central catabolic pathways for aromatic compounds that is used to assimilate intermediates derived from the oxidation of phenylalanine, tyrosine, and several aromatic hydrocarbons. This led us to analyze whether Crc also regulates the expression of the other central catabolic pathways for aromatic compounds present in P. putida. It was found that genes required to assimilate benzoate through the catechol pathway (benA and catBCA) and 4-OH-benzoate through the protocatechuate pathway (pobA and pcaHG) are also negatively modulated by Crc. However, the pathway for phenylacetate appeared to be unaffected by Crc. These results expand the influence of Crc to pathways used to assimilate several aromatic compounds, which highlights its importance as a master regulator of carbon metabolism in P. putida.


2010 ◽  
Vol 138 (5) ◽  
pp. S-505
Author(s):  
Petr Protiva ◽  
Joel B. Mason ◽  
Zhenhua Liu ◽  
Michael E. Hopkins ◽  
Celeste G. Nelson ◽  
...  

1982 ◽  
Vol 9 (4) ◽  
pp. 489 ◽  
Author(s):  
I.R Cowan ◽  
J.A Raven ◽  
W. Hartung ◽  
G.D Farquhar

Data on pH in free space, cytoplasm, chloroplasts and vacuoles in leaf tissue are used to calculate the distribution of abscisic acid (ABA) amongst these compartments, assuming that the intervening membranes are permeable to undissociated ABA only. Data on the permeability of membranes to ABA are used to calculate the time constant for equilibration between the free space and the other components. It is concluded that changes in pH in the chloroplast stroma due to irradiance, or other factors, will change the amount of ABA available to the guard cells via the free space, and that the time constant is similar to that for light-induced stomatal movement. The possibility that such changes play a role in modulating stomatal aperture is discussed.


2010 ◽  
Vol 140 (10) ◽  
pp. 1736-1741 ◽  
Author(s):  
Karen E. Christensen ◽  
Qing Wu ◽  
Xiaoling Wang ◽  
Liyuan Deng ◽  
Marie A. Caudill ◽  
...  

2020 ◽  
Vol 4 (Supplement_1) ◽  
pp. 126-126
Author(s):  
Christopher Choi ◽  
Scott Leiser ◽  
Charles Evans ◽  
Daniel Beard

Abstract Nematode flavin-containing monooxygenase-2 (fmo-2) is induced by dietary restriction and hypoxia, and is required for the longevity and health benefits of these pathways. It is also sufficient to confer these benefits when overexpressed. As FMOs are well-conserved across taxa, the fmo-2 mechanism has high translational potential. To determine the changes that occur following fmo-2 induction, we performed RNA-seq and untargeted metabolomics analyses. Our data reveal that one-carbon metabolism (OCM) is significantly altered by fmo-2 overexpression. OCM is a nexus for essential metabolic pathways, including transmethylation, transsulfuration, nucleotide synthesis, and amino acid metabolism. We hypothesized that fmo-2 confers longevity benefits by altering key metabolic processes within or downstream of OCM. To test this, we asked whether fmo-2 and OCM interact to regulate longevity by knocking down expression of genes involved with OCM and measuring lifespan and oxidative stress resistance. To understand the biological implications of these interactions, we generated a computational model using qPCR data of key OCM-related genes to predict changes in OCM metabolic flux. Our model predicts significant changes in OCM flux that are regulated by fmo-2 expression levels and are consistent with our RNAi and multi-omics results. We are now testing this model by knocking down genes downstream of OCM to determine their role in fmo-2-mediated benefits. Preliminary results support our hypothesis that changes in metabolic flux through OCM are involved downstream of fmo-2 expression, and may also implicate the UPRER in this pathway. Our future work will elucidate this mechanism and link stress perception and fmo-2-mediated longevity.


2009 ◽  
Vol 8 (10) ◽  
pp. 1604-1614 ◽  
Author(s):  
Melissa A. Ramírez ◽  
Michael C. Lorenz

ABSTRACT Carbon starvation is one of the many stresses to which microbial pathogens are subjected while in the host. Pathways necessary for the utilization of alternative carbon sources, such as gluconeogenesis, the glyoxylate cycle, and β-oxidation of fatty acids, have been shown to be required for full virulence in several systems, including the fungal pathogen Candida albicans. We have investigated the regulatory network governing alternative carbon metabolism in this organism through characterization of transcriptional regulators identified based on the model fungi, Saccharomyces cerevisiae and Aspergillus nidulans. C. albicans has homologs of the ScCAT8/AnFacB and ScADR1/AnAmdX transcription factors that regulate induction of genes encoding the proteins of gluconeogenesis, the glyoxylate cycle, and ethanol utilization. Surprisingly, C. albicans mutants lacking CAT8 or ADR1 have no apparent phenotypes and do not regulate genes for key enzymes of these pathways. Fatty acid degradation and peroxisomal biogenesis are controlled by nonhomologous regulators, OAF1/PIP2 in S. cerevisiae and FarA/FarB in A. nidulans; C. albicans is missing OAF1 and PIP2 and, instead, has a single homolog of the Far proteins, CTF1. We have shown that CTF1 is required for growth on lipids and for expression of genes necessary for β-oxidation, such as FOX2. ctf1Δ/ctf1Δ (ctf1Δ/Δ) strains do not, however, show the pleiotropic phenotypes observed for fox2Δ/Δ mutants. The ctf1Δ/Δ mutant confers a mild attenuation in virulence, like the fox2Δ/Δ mutant. Thus, phenotypic and genotypic observations highlight important differences in the regulatory network for alternative carbon metabolism in C. albicans compared to the paradigms developed in other model fungi.


2019 ◽  
Vol 43 (1) ◽  
pp. 87-102 ◽  
Author(s):  
Maxime Durand ◽  
David Cohen ◽  
Nathalie Aubry ◽  
Cyril Buré ◽  
Ivana Tomášková ◽  
...  

Author(s):  
P. Dayanandan ◽  
P. B. Kaufman

A three dimensional appreciation of the guard cell morphology coupled with ultrastjuctural studies should lead to a better understanding of their still obscure dynamics of movement. We have found the SEM of great value not only in studies of the surface details of stomata but also in resolving the structures and relationships that exist between the guard and subsidiary cells. We now report the isolation and SEM studies of guard cells from nine genera of plants.Guard cells were isolated from the following plants: Psilotum nudum, four species of Equisetum, Cycas revoluta, Ceratozamia sp., Pinus sylvestris, Ephedra cochuma, Welwitschia mirabilis, Euphorbia tirucalli and Allium cepa.


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