Fusarium avenaceum and Fusarium crookwellens cause onion basal rot in Iran

2019 ◽  
Vol 52 (9-10) ◽  
pp. 953-968
Author(s):  
Akbar Jahedi ◽  
Naser Safaie ◽  
Ebrahim Mohammadi Goltapeh
2017 ◽  
Author(s):  
Andrew D. Armitage ◽  
Andrew Taylor ◽  
Maria K. Sobczyk ◽  
Laura Baxter ◽  
Bethany P.J. Greenfield ◽  
...  

AbstractA reference-quality assembly of Fusarium oxysporum f. sp. cepae (Foc), the causative agent of onion basal rot has been generated along with genomes of additional pathogenic and non-pathogenic isolates. Phylogenetic analysis confirmed a single origin of the Foc pathogenic lineage.Genome alignments with other F. oxysporum ff. spp. and non pathogens revealed high levels of syntenic conservation of core chromosomes but little synteny between lineage specific (LS) chromosomes. Four LS contigs in Foc totaling 3.9 Mb were designated as pathogen-specific (PS). A two-fold increase in segmental duplication events was observed between LS regions of the genome compared to within core regions or from LS regions to the core.RNA-seq expression studies identified candidate effectors expressed in planta, consisting of both known effector homologs and novel candidates. FTF1 and a subset of other transcription factors implicated in regulation of effector expression were found to be expressed in planta.


2014 ◽  
Vol 50 (No. 1) ◽  
pp. 19-25 ◽  
Author(s):  
M. Türkkan ◽  
I. Erper

The efficacy of twelve sodium salts as possible alternatives to synthetic fungicides for the control of onion basal rot caused by&nbsp;Fusarium oxysporum&nbsp;f.sp.&nbsp;cepae&nbsp;was evaluated.&nbsp;In vitro&nbsp;tests showed that there were significant differences between the inhibitory effects of sodium salts on the mycelial growth (P&nbsp;&le; 0.05) and 2% (w/v) concentrations of sodium metabisulfite and sodium fluoride completely inhibited mycelial growth of the fungus, while other salts did not. Sodium metabisulfite and sodium phosphate monobasic had lower pH values than the other salts. Unlike sodium metabisulfite, sodium phosphate monobasic could not decrease the mycelial growth. The ED<sub>50</sub>, minimum inhibition concentration (MIC), and minimum fungicidal concentration (MFC) values indicated that sodium metabisulfite was more inhibitory to the fungus compared to sodium fluoride. In soil tests, inhibitory effect of sodium metabisulfite on the fungus was higher than that of sodium fluoride, where sodium metabisulfite completely inhibited mycelial growth at even 0.4% concentration.


2019 ◽  
Vol 101 (3) ◽  
pp. 579-586
Author(s):  
Nehal Samy El-Mougy ◽  
Mokhtar Mohamed Abdel-Kader

2021 ◽  
Vol 7 (3) ◽  
pp. 235
Author(s):  
Ofir Degani ◽  
Ben Kalman

The onion basal rot disease is a worldwide threat caused by species of the genus Fusarium. Today, Israel’s control of this disease is limited to a four-year growth cycle and Metam sodium soil disinfection. Here, commercial chemical fungicides were evaluated as control treatments against two of the primary pathogens involved, F. oxysporum f. sp. cepae and F. Acutatum. Out of 10 fungicides tested on culture plates, 3, Prochloraz, Azoxystrobin + Tebuconazole, and Fludioxonil + Sedaxen, had strong inhibitory effects on mycelial growth and were selected and tested in seeds in vitro. The preparations were applied as a seed coating and tested in two commercial cultivars, Riverside (Orlando, white cv.) and Noam (red cv.). Prochloraz (0.3% w/w concentration), the most promising compound, was efficient in reducing the Noam cv. sprouts’ disease symptoms. This preparation had no harmful in situ-toxicity effect and did not influence the plants’ seed germination and early development. In Noam cv. potted 30-day-old sprouts, the Prochloraz treatment was able to reduce the harmful impact of F. oxysporum f. sp. cepae. on the seedlings’ wet biomass, but was not effective in the Riverside cv. or against the F. acutatum pathogen. This suggests that future protective strategies must include an effective protective suit tailored to each of the pathogen species involved and the onion cultivar. The methods presented in this work can be applied for rapidly scanning multiple compounds while gradually ruling out ineffective ones. Eventually, this screening will enable field testing of the highest potential fungicides that successfully pass the pot experiments.


Plant Disease ◽  
2018 ◽  
Vol 102 (12) ◽  
pp. 2646 ◽  
Author(s):  
M. A Tirado-Ramírez ◽  
C. A. López-Orona ◽  
T. de J. Velázquez-Alcaraz ◽  
T. Díaz-Valdés ◽  
S. Velarde-Félix ◽  
...  

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Andrew D. Armitage ◽  
Andrew Taylor ◽  
Michelle T. Hulin ◽  
Alison C. Jackson ◽  
Richard J. Harrison ◽  
...  

Fusarium proliferatum is a component of the onion basal rot disease complex. We present an annotated F. proliferatum draft genome sequence, totaling 45.8 Mb in size, assembled into 597 contigs, with a predicted 15,418 genes. The genome contains 58 secondary metabolite clusters and homologs of the Fusarium oxysporum effector SIX2.


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