scholarly journals Draft Genome Sequence of an Onion Basal Rot Isolate of Fusarium proliferatum

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Andrew D. Armitage ◽  
Andrew Taylor ◽  
Michelle T. Hulin ◽  
Alison C. Jackson ◽  
Richard J. Harrison ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Fusarium Proliferatum ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Basal Rot ◽  
Rot Disease ◽  
Onion Basal Rot

Fusarium proliferatum is a component of the onion basal rot disease complex. We present an annotated F. proliferatum draft genome sequence, totaling 45.8 Mb in size, assembled into 597 contigs, with a predicted 15,418 genes. The genome contains 58 secondary metabolite clusters and homologs of the Fusarium oxysporum effector SIX2.

scholarly journals Draft Genome Sequence of the Most Traditional ε-Poly-l-Lysine Producer, Streptomyces albulus NBRC14147

2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Kazuya Yamanaka ◽  
Yoshimitsu Hamano
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Lysine Producer

The genus Streptomyces is known for its secondary metabolite biosynthetic capacities. We report here the draft genome sequence of the most extensively studied ε-poly-l-lysine producer, Streptomyces albulus NBRC14147.

scholarly journals Draft Genome Sequence of Gordonia lacunae BS2T

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Kim Durrell ◽  
Alaric Prins ◽  
Marilize Le Roes-Hill
Keyword(s):  
South Africa ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Biosynthetic Genes ◽  
Content Type ◽  
New Compounds

ABSTRACT We report here the draft genome sequence of the soil bacterium Gordonia lacunae BS2T (= DSM 45085T = JCM 14873T = NRRL B-24551T), isolated from an estuary in Plettenberg Bay, South Africa. Analysis of the draft genome revealed that more than 40% of the secondary metabolite biosynthetic genes encode new compounds.

scholarly journals Draft Genome Sequence of Rhizobium sp. Strain TBD182, an Antagonist of the Plant-Pathogenic Fungus Fusarium oxysporum, Isolated from a Novel Hydroponics System Using Organic Fertilizer

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Yuichiro Iida ◽  
Kazuki Fujiwara ◽  
Nobutaka Someya ◽  
Makoto Shinohara
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Pathogenic Fungus ◽  
Organic Fertilizer ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fungistatic Activity ◽  
Rhizobium Sp

ABSTRACT Rhizobium sp. strain TBD182, isolated from a novel hydroponics system, is an antagonistic bacterium that inhibits the mycelial growth of Fusarium oxysporum but does not eliminate the pathogen. We report the draft genome sequence of TBD182, which may contribute to elucidation of the molecular mechanisms of its fungistatic activity.

scholarly journals Draft Genome Sequence of the Type Strain Streptomyces armeniacus ATCC 15676

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Puneet Labana ◽  
Jessica T. Gosse ◽  
Christopher N. Boddy
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
De Novo ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Significant Source ◽  
Content Type

The Streptomyces genus represents a prolific and significant source for secondary metabolite discovery. Here, we report a de novo assembly and draft genome sequence for the type strain Streptomyces armeniacus ATCC 15676.

scholarly journals Draft Genome Sequence of Streptomyces olivochromogenes NBRC 3561, a Bioactive Peptide-Producing Actinobacterium

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Hideo Dohra ◽  
Yuto Miyake ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioactive Peptide ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Recently, we found that Streptomyces olivochromogenes NBRC 3561 produced a bioactive peptide, so we sequenced its genome to clarify its biosynthesis. We report here the draft genome sequence of S. olivochromogenes NBRC 3561, in which 40 potential secondary metabolite gene clusters were predicted by antiSMASH.

scholarly journals Draft Genome Sequence and Secondary Metabolite Biosynthetic Potential of the Lysobacter niastensis Type Strain DSM 18481

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Paolo Turrini ◽  
Irene Artuso ◽  
Marco Tescari ◽  
Gabriele Andrea Lugli ◽  
Emanuela Frangipani ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Small Molecules ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Lysobacter niastensis belongs to a group of bacterial predators that produce a number of bioactive small molecules endowed with lytic properties toward other microorganisms. Here, we report the draft genome sequence of the type strain DSM 18481 and the identification of gene clusters implicated in the biosynthesis of secondary metabolites.

scholarly journals Draft Genome Sequence of Enterobacter kobei M4-VN, Isolated from Potatoes with Soft Rot Disease

2020 ◽  
Vol 9 (36) ◽  
Author(s):  
Nguyen Cong Thanh ◽  
Yasuhiro Fujino ◽  
Yasuaki Hiromasa ◽  
Katsumi Doi
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Soft Rot ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Soft Rot Disease ◽  
Rot Disease

ABSTRACT Enterobacter kobei M4-VN, isolated from potatoes with soft rot disease in Vietnam, contains a total of 4,754,309 bp with 4,424 predicted coding sequences and a G+C content of 55.1%.

scholarly journals Draft Genome Sequence of Streptomyces aureoverticillatus HN6, a Strain Antagonistic against Fusarium oxysporum f. sp. cubense Race 4

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Rong Di ◽  
Yee Chen Low ◽  
Lanying Wang ◽  
Yanping Luo
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Antibiotic Biosynthesis ◽  
Content Type ◽  
Race 4

ABSTRACT Streptomyces aureoverticillatus HN6 was isolated in Hainan, China. It is highly inhibitory to Fusarium oxysporum f. sp. cubense race 4 (FOC4), which causes banana Fusarium wilt. The HN6 genome was fully sequenced and assembled. Bionformatic analysis shows that the HN6 genome contains at least 208 genes involved in antibiotic biosynthesis.

scholarly journals Draft Genome Sequence of an Isolate of Fusarium oxysporum f. sp. melongenae, the Causal Agent of Fusarium Wilt of Eggplant

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Zhangyong Dong ◽  
Tom Hsiang ◽  
Mei Luo ◽  
Meimei Xiang
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Draft Genome ◽  
Causal Agent ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Final Assembly

ABSTRACT Here, we present the genome sequence of an isolate (14004) of Fusarium oxysporum f. sp. melongenae, an eggplant pathogen. The final assembly consists of 1,631 scaffolds with 53,986,354 bp (G+C content, 46.4%) and 16,485 predicted genes.

scholarly journals Draft Genome Sequence of Streptomyces spongiicola Strain 531S, an Actinobacterium Isolated from Marine Sediment

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Hideo Dohra ◽  
Issara Kaweewan ◽  
Beatriz E. Casareto ◽  
Yoshimi Suzuki ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

Streptomyces spongiicola strain 531S (NBRC 113560) was isolated from marine sediment on a beach on Sesoko Island (Okinawa, Japan). We report here the draft genome sequence of S. spongiicola 531S, in which 24 potential secondary metabolite gene clusters were predicted with antiSMASH.

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