scholarly journals Genetic diversity and structure of Carpinus laxiflora populations in South Korea based on AFLP markers

2019 ◽  
Vol 15 (4) ◽  
pp. 192-201 ◽  
Author(s):  
Ji-Young Ahn ◽  
Jei-Wan Lee ◽  
Min-Woo Lee ◽  
Kyung-Nak Hong
2014 ◽  
Vol 41 (5) ◽  
pp. 3317-3329 ◽  
Author(s):  
Ahmad Reza Dadras ◽  
Hossein Sabouri ◽  
Ghasem Mohammadi Nejad ◽  
Atefeh Sabouri ◽  
Mardavij Shoai-Deylami

Crustaceana ◽  
2015 ◽  
Vol 88 (1) ◽  
pp. 1-17
Author(s):  
Xiaoying Li ◽  
Zhiguo Dong ◽  
Hongbo Su ◽  
Qingqi Zhang ◽  
Huan Gao ◽  
...  

Using fluorescent AFLP-markers, the genetic diversity and structure of six geographical populations of the swimming crab,Portunus trituberculatus(Miers, 1876), from the coast of China were analysed to assess their genetic resource state. Eight primer combinations generated 925 loci among 85 individuals, and revealed a high polymorphism within these populations that varied from 57.41% (Zhoushan population) to 76.86% (Dalian population). According to the combination of percentage of polymorphic loci (PPL) and Shannon’s information index (I), the populations from Zhangzhou, Dongying and Dalian showed more genetic variation than the Lianyungang, Zhanjiang and Zhoushan populations. The gene flow () and across all populations overall were 1.935 and 0.205, respectively, showing moderate genetic differentiation. Differentiation was highest in the Zhoushan and Zhanjiang populations, and the geographical distribution and UPGMA cluster tree were not fully accordant. Neutrality test results revealed that the Zhangzhou population faced a smaller selective pressure than the other five populations (). In general, a high genetic diversity among theP. trituberculatuspopulations was observed along the coast of China, especially in the Zhangzhou, Dongying, Dalian and Lianyungang populations, while a pronounced level () of genetic differentiation has occurred between the Zhoushan population and the other populations. Therefore, these findings have the following implications for conservation and genetic improvement: (1) high diversity levels and good genetic resources, especially in the Zhangzhou population, which could lay the foundations for breeding research and genetic improvement; (2) the importance of preventing species escape and gene pool contamination in ex-situ conservation and species introduction programs in the Zhoushan population.


Hereditas ◽  
2019 ◽  
Vol 156 (1) ◽  
Author(s):  
Wen-Dan Wu ◽  
Wen-Hui Liu ◽  
Ming Sun ◽  
Ji-Qiong Zhou ◽  
Wei Liu ◽  
...  

Genetica ◽  
2016 ◽  
Vol 144 (6) ◽  
pp. 627-638 ◽  
Author(s):  
Eleonora Zambrano Blanco ◽  
Miklos Maximiliano Bajay ◽  
Marcos Vinícius Bohrer Monteiro Siqueira ◽  
Maria Imaculada Zucchi ◽  
José Baldin Pinheiro

2014 ◽  
Vol 40 (10) ◽  
pp. 1877
Author(s):  
Feng-Gang ZAN ◽  
Cai-Wen WU ◽  
Xue-Kuan CHEN ◽  
Pei-Fang ZHAO ◽  
Jun ZHAO ◽  
...  

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Fehintola V. Ajogbasile ◽  
Adeyemi T. Kayode ◽  
Paul E. Oluniyi ◽  
Kazeem O. Akano ◽  
Jessica N. Uwanibe ◽  
...  

Abstract Background Malaria remains a public health burden especially in Nigeria. To develop new malaria control and elimination strategies or refine existing ones, understanding parasite population diversity and transmission patterns is crucial. Methods In this study, characterization of the parasite diversity and structure of Plasmodium falciparum isolates from 633 dried blood spot samples in Nigeria was carried out using 12 microsatellite loci of P. falciparum. These microsatellite loci were amplified via semi-nested polymerase chain reaction (PCR) and fragments were analysed using population genetic tools. Results Estimates of parasite genetic diversity, such as mean number of different alleles (13.52), effective alleles (7.13), allelic richness (11.15) and expected heterozygosity (0.804), were high. Overall linkage disequilibrium was weak (0.006, P < 0.001). Parasite population structure was low (Fst: 0.008–0.105, AMOVA: 0.039). Conclusion The high level of parasite genetic diversity and low population structuring in this study suggests that parasite populations circulating in Nigeria are homogenous. However, higher resolution methods, such as the 24 SNP barcode and whole genome sequencing, may capture more specific parasite genetic signatures circulating in the country. The results obtained can be used as a baseline for parasite genetic diversity and structure, aiding in the formulation of appropriate therapeutic and control strategies in Nigeria.


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