Pepper mild mottle virus in different water matrices

2020 ◽  
Vol 30 (Supplement_5) ◽  
Author(s):  
G Bonanno Ferraro ◽  
E Suffredini ◽  
P Mancini ◽  
C Veneri ◽  
M Iaconelli ◽  
...  
Keyword(s):  
Water Samples ◽  
Water Cycle ◽  
Human Subjects ◽  
Mottle Virus ◽  
Pepper Mild Mottle Virus ◽  
Healthy Human ◽  
Drinking Waters ◽  
Bathing Waters ◽  
Seawater Samples ◽  
Wastewater Samples

Abstract Background Pepper mild mottle virus (PMMoV), a plant virus belonging to Virgoviridae, has recently been suggested as a potential viral indicator for faecal pollution in aquatic environments, since it has been found to be abundantly excreted from healthy human subjects. Methods The occurrence, amount and diversity of PMMoV was investigated in water environments by nested RT-PCR and TaqMan based quantitative PCR. During 2017-2019, 251 water samples (92 urban wastewaters, 32 treated effluents, 16 surface water samples, 9 estuarine samples, 20 seawater samples, 67 groundwater samples, and 15 drinking waters) were analysed. Results PMMoV was detected in 73/92 (79%) wastewater samples, 22/32 (69%) treated sewages, 11/16 (69%) river samples, 6/9 (67%) estuarine samples, 5/20 (25%) bathing waters, and 9/67 (13%) groundwaters, whilst drinking water samples tested always negative. Mean viral concentrations (genome copies/L) were: raw sewage 4.2 × 106, treated sewage 7.4 × 105, river 3.2 × 103, estuarine waters 9.6 × 102, seawaters 3.0 × 102, groundwaters 7.7 × 101. Conclusions This study highlights the significant occurrence of PMMoV in aquatic environment in Italy, and a clear gradient of viral prevalence and concentrations from polluted to clean waters (wastewaters to drinking waters). Key messages PMMoV is ubiquitous throughout the water cycle in Italy with different concentrations. Studies are needed to evaluate the suitability of PMMoV as a viral indicator for human fecal pollution in waters.

scholarly journals Pepper Mild Mottle Virus as an Indicator of Fecal Pollution

2009 ◽  
Vol 75 (22) ◽  
pp. 7261-7267 ◽  
Author(s):  
Karyna Rosario ◽  
Erin M. Symonds ◽  
Christopher Sinigalliano ◽  
Jill Stewart ◽  
Mya Breitbart
Keyword(s):  
The United States ◽  
Fecal Pollution ◽  
Point Sources ◽  
Mottle Virus ◽  
Treated Wastewater ◽  
Recreational Waters ◽  
Pepper Mild Mottle Virus ◽  
Fecal Samples ◽  
Seawater Samples ◽  
Wastewater Samples

ABSTRACT Accurate indicators of fecal pollution are needed in order to minimize public health risks associated with wastewater contamination in recreational waters. However, the bacterial indicators currently used for monitoring water quality do not correlate with the presence of pathogens. Here we demonstrate that the plant pathogen Pepper mild mottle virus (PMMoV) is widespread and abundant in wastewater from the United States, suggesting the utility of this virus as an indicator of human fecal pollution. Quantitative PCR was used to determine the abundance of PMMoV in raw sewage, treated wastewater, seawater exposed to wastewater, and fecal samples and/or intestinal homogenates from a wide variety of animals. PMMoV was present in all wastewater samples at concentrations greater than 1 million copies per milliliter of raw sewage. Despite the ubiquity of PMMoV in human feces, this virus was not detected in the majority of animal fecal samples tested, with the exception of chicken and seagull samples. PMMoV was detected in four out of six seawater samples collected near point sources of secondary treated wastewater off southeastern Florida, where it co-occurred with several other pathogens and indicators of fecal pollution. Since PMMoV was not found in nonpolluted seawater samples and could be detected in surface seawater for approximately 1 week after its initial introduction, the presence of PMMoV in the marine environment reflects a recent contamination event. Together, these data demonstrate that PMMoV is a promising new indicator of fecal pollution in coastal environments.

scholarly journals Enteric Viruses and Pepper Mild Mottle Virus Show Significant Correlation in Select Mid-Atlantic Agricultural Waters

2021 ◽  
Author(s):  
Brienna L. Anderson-Coughlin ◽  
Shani Craighead ◽  
Alyssa Kelly ◽  
Samantha Gartley ◽  
Adam Vanore ◽  
...  
Keyword(s):  
United States ◽  
Surface Waters ◽  
Irrigation Water ◽  
Water Samples ◽  
Enteric Viruses ◽  
The United States ◽  
Mottle Virus ◽  
Pepper Mild Mottle Virus ◽  
Atlantic Region ◽  
Viral Pathogen

Enteric viruses (EV) are the largest contributors to foodborne illness and outbreaks globally. Their ability to persist in the environment, coupled with the challenges experienced in environmental monitoring create a critical aperture through which agricultural crops may become contaminated. This study involved a seventeen-month investigation of select human enteric viruses and viral indicators in non-traditional irrigation water sources, surface and reclaimed waters, in the Mid-Atlantic region of the United States. Real-time quantitative PCR was used for detection of Aichi virus, hepatitis A virus, noroviruses GI and GII. Pepper mild mottle virus (PMMoV), a common viral indicator of human fecal contamination, was also evaluated along with atmospheric (air and water temperature, cloud cover, and precipitation 24 h, 7 d and 14 d prior to sample collection) and physicochemical (dissolved oxygen, pH, salinity and turbidity) data to determine if there were any association between EV and measured parameters. EV were detected more frequently in reclaimed waters (32%, n=22) than in surface waters (4%, n=49) similar to PMMoV detection frequency in surface (33%, n=42) and reclaimed (67%, n=21) water. Our data show a significant correlation between EV and PMMoV (R2=0.628; p<0.05) detection in reclaimed water samples, but not in surface waters (R2=0.476; p=0.78). Water salinity significantly affected the detection of both EV and PMMoV (p<0.05) as demonstrated by logistic regression analyses. These results provide relevant insights into the extent and degree of association between human enteric (pathogenic) viruses and water quality data in Mid-Atlantic surface and reclaimed waters as potential sources for agricultural irrigation. IMPORTANCE Microbiological analysis of agricultural waters is fundamental to ensure microbial food safety. The highly variable nature of non-traditional sources of irrigation water are particularly difficult to test for the presence of viruses. Multiple characteristics influence viral persistence in a water source as well as affect the recovery and detection methods which are employed. Testing for a suite of viruses in water samples is often too costly and labor intensive, making identification of suitable indicators for viral pathogen contamination necessary. The results from this study address two critical data gaps: enteric virus prevalence in surface and reclaimed waters of the Mid-Atlantic region of the United States and subsequent evaluation of physicochemical and atmospheric parameters used to inform the potential for use of indicators of viral contamination.

scholarly journals Occurrence of Pepper Mild Mottle Virus in Drinking Water Sources in Japan

2013 ◽  
Vol 79 (23) ◽  
pp. 7413-7418 ◽  
Author(s):  
Eiji Haramoto ◽  
Masaaki Kitajima ◽  
Naohiro Kishida ◽  
Yoshiaki Konno ◽  
Hiroyuki Katayama ◽  
...  
Keyword(s):  
Drinking Water ◽  
Water Samples ◽  
Rna Extraction ◽  
Water Sources ◽  
Mottle Virus ◽  
Environmental Waters ◽  
Pepper Mild Mottle Virus ◽  
Drinking Water Sources ◽  
Geographical Regions ◽  
Significant Difference

ABSTRACTPepper mild mottle virus (PMMoV) is a plant virus that has been recently proposed as a potential indicator of human fecal contamination of environmental waters; however, information on its geographical occurrence in surface water is still limited. We aimed to determine the seasonal and geographic occurrence of PMMoV in drinking water sources all over Japan. Between July 2008 and February 2011, 184 source water samples were collected from 30 drinking water treatment plants (DWTPs); viruses from 1 to 2 liters of each sample were concentrated by using an electronegative membrane, followed by RNA extraction and reverse transcription. Using quantitative PCR, PMMoV was detected in 140 (76%) samples, with a concentration ranging from 2.03 × 103to 2.90 × 106copies/liter. At least one of the samples from 27 DWTPs (n= 4 or 8) was positive for PMMoV; samples from 10 of these DWTPs were always contaminated. There was a significant difference in the occurrence of PMMoV among geographical regions but not a seasonal difference. PMMoV was frequently detected in samples that were negative for human enteric virus orEscherichia coli. A phylogenetic analysis based on the partial nucleotide sequences of the PMMoV coat protein gene in 12 water samples from 9 DWTPs indicated that there are genetically diverse PMMoV strains present in drinking water sources in Japan. To our knowledge, this is the first study to demonstrate the occurrence of PMMoV in environmental waters across wide geographical regions.

Prevalence and distribution of Cryptosporidium and Giardia in wastewater and the surface, drinking and ground waters in the Lower Rhine, Germany

2012 ◽  
Vol 141 (1) ◽  
pp. 9-21 ◽  
Author(s):  
C. GALLAS-LINDEMANN ◽  
I. SOTIRIADOU ◽  
J. PLUTZER ◽  
P. KARANIS
Keyword(s):  
Water Samples ◽  
Giardia Lamblia ◽  
Substantial Evidence ◽  
Aluminium Sulphate ◽  
Drinking Waters ◽  
Contrast Microscopy ◽  
Interference Contrast Microscopy ◽  
Wastewater Samples ◽  
Drinking Water Samples ◽  
Lower Rhine

SUMMARYSamples from different water sources (n = 396) were collected during 2009 and 2011. Wastewater (2–5 l) was purified by aluminium sulphate flocculation. Surface, ground and drinking waters (400–6400 l) were collected by filtration. Cryptosporidium oocysts and Giardia cysts were further concentrated by sucrose centrifugation. (Oo)cysts were identified by IFT (immunofluorescence test), DAPI (4′,6-diamidino-2-phenylindole) staining and DICM (difference interference contrast microscopy). Out of 206 wastewater samples, 134 (65·0%) were found to be positive for Giardia cysts and 64 (31·1%) for Cryptosporidium oocysts. Parasite numbers ranged from 0 to 2436 cysts/l and 0 to 1745 oocysts/l. Eight (4·2%) surface and drinking water samples (n = 190) were found to be positive for Giardia cysts (0–56000/100 l), and 18 (9·5%) for Cryptosporidium oocysts (2400/100 l). The purpose of this study was to establish the prevalence and concentrations of Giardia lamblia and Cryptosporidium spp. by detecting (oo)cysts from water samples. This study provides substantial evidence that G. lamblia cysts and Cryptosporidium spp. oocysts are able to enter and circulate in the aquatic environment with negative implications for public health.

scholarly journals Evaluating recovery, cost, and throughput of different concentration methods for SARS-CoV-2 wastewater-based epidemiology

2020 ◽  
Author(s):  
Zachary W. LaTurner ◽  
David M. Zong ◽  
Prashant Kalvapalle ◽  
Kiara Reyes Gamas ◽  
Austen Terwilliger ◽  
...  
Keyword(s):  
Mottle Virus ◽  
List Type ◽  
Pepper Mild Mottle Virus ◽  
Method Performance ◽  
Bovine Coronavirus ◽  
Bead Beating ◽  
Virus Rna ◽  
Recovery Cost ◽  
Wastewater Samples ◽  
Concentration Methods

AbstractAs the COVID-19 pandemic continues to affect communities across the globe, the need to contain the spread of the outbreaks is of paramount importance. Wastewater monitoring of the SARS-CoV-2 virus, the causative agent responsible for COVID-19, has emerged as a promising tool for health officials to anticipate outbreaks. As interest in wastewater monitoring continues to grow and municipalities begin to implement this approach, there is a need to further identify and evaluate methods used to concentrate SARS-CoV-2 virus RNA from wastewater samples. Here we evaluate the recovery, cost, and throughput of five different concentration methods for quantifying SARS-CoV-2 virus RNA in wastewater samples. We tested the five methods on six different wastewater samples. We also evaluated the use of a bovine coronavirus vaccine as a process control and pepper mild mottle virus as a normalization factor. Of the five methods we tested head-to-head, we found that HA filtration with bead beating performed the best in terms of sensitivity and cost. This evaluation can serve as a guide for laboratories establishing a protocol to perform wastewater monitoring of SARS-CoV-2.HighlightsFive methods for concentrating SARS-CoV-2 RNA from wastewater evaluatedMethod performance characterized via recovery, cost, throughput, and variabilityHA filtration with bead beating had highest recovery for comparatively low costBovine coronavirus, pepper mild mottle virus assessed as possible recovery controls

Minimizing Carry-Over Effects After Treatment Failure and Maximizing Therapeutic Outcome

2014 ◽  
Vol 222 (3) ◽  
pp. 171-178 ◽  
Author(s):  
Mareile Hofmann ◽  
Nathalie Wrobel ◽  
Simon Kessner ◽  
Ulrike Bingel
Keyword(s):  
Treatment Failure ◽  
Human Subjects ◽  
Subsequent Treatment ◽  
Clinical Samples ◽  
Administration Route ◽  
Healthy Human ◽  
Negative Experiences ◽  
Analgesic Treatment ◽  
Balanced Design ◽  
Carry Over

According to experimental and clinical evidence, the experiences of previous treatments are carried over to different therapeutic approaches and impair the outcome of subsequent treatments. In this behavioral pilot study we used a change in administration route to investigate whether the effect of prior treatment experience on a subsequent treatment depends on the similarity of both treatments. We experimentally induced positive or negative experiences with a topical analgesic treatment in two groups of healthy human subjects. Subsequently, we compared responses to a second, unrelated and systemic analgesic treatment between both the positive and negative group. We found that there was no difference in the analgesic response to the second treatment between the two groups. Our data indicate that a change in administration route might reduce the influence of treatment history and therefore be a way to reduce negative carry-over effects after treatment failure. Future studies will have to validate these findings in a fully balanced design including larger, clinical samples.

Detection of Soluble Fibrin Monomer Complexes in Blood by Means of Protamine Sulphate Test

1968 ◽  
Vol 20 (01/02) ◽  
pp. 044-049 ◽  
Author(s):  
B Lipiński ◽  
K Worowski
Keyword(s):  
Human Subjects ◽  
Coronary Thrombosis ◽  
Mean Value ◽  
Healthy Human ◽  
Protamine Sulphate ◽  
Soluble Fibrin ◽  
Fibrin Monomer ◽  
Dog Plasma ◽  
The Mean ◽  
Precipitable Protein

SummaryIn the present paper described is a simple test for detecting soluble fibrin monomer complexes (SFMC) in blood. The test consists in mixing 1% protamine sulphate with diluted oxalated plasma or serum and reading the optical density at 6190 Å. In experiments with dog plasma, enriched with soluble fibrin complexes, it was shown that OD read in PS test is proportional to the amount of fibrin recovered from the precipitate. It was found that SFMC level in plasma increases in rabbits infused intravenously with thrombin and decreases after injection of plasmin with streptokinase. In both cases PS precipitable protein in serum is elevated indicating enhanced fibrinolysis. In healthy human subjects the mean value of OD readings in plasma and sera were found to be 0.30 and 0.11, while in patients with coronary thrombosis they are 0.64 and 0.05 respectively. The origin of SFMC in circulation under physiological and pathological conditions is discussed.

Chronic stress decreases circulating endocannabinoid 2-arachidonoylglycerol in healthy human subjects

2015 ◽  
Author(s):  
Buqing Yi ◽  
Igor Nichiporuk ◽  
Matthias Feuerecker ◽  
Gustav Schelling ◽  
Alexander Chouker
Keyword(s):  
Chronic Stress ◽  
Human Subjects ◽  
Healthy Human ◽  
Healthy Human Subjects
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