scholarly journals Ensemble models for data-poor assessment: accounting for uncertainty in life-history information

2019 ◽  
Vol 76 (4) ◽  
pp. 870-883 ◽  
Author(s):  
Merrill B Rudd ◽  
James T Thorson ◽  
Skyler R Sagarese

Abstract Length measurements from fishery catch can be used in data-limited assessments to estimate important population parameters to guide management, but results are highly sensitive to assumptions about biological information. Ideally, local life history studies inform biological parameters. In the absence of reliable local estimates, scientists and managers face the difficult task of agreeing on fixed values for life-history parameters, often leading to additional uncertainty unquantified in the assessment or indecision defaulting to status-quo management. We propose an ensemble approach for incorporating life history uncertainty into data-limited stock assessments. We develop multivariate distributions of growth, mortality, and maturity parameter values, then use bivariate interpolation and stacking as an ensemble learning algorithm to propagate uncertainty into length-based, data-limited stock assessment models. Simulation testing demonstrated that stacking across life history parameter values leads to improved interval coverage over simple model averaging or assuming the parameter distribution means when the true life-history parameter values are unknown. We then applied the stacking approach for a U.S. Caribbean stock where the Scientific and Statistical Committee did not accept the assessment due to uncertainty in life history parameters. Stacking can better characterize uncertainty in stock status whenever life-history parameters are unknown but likely parameter distributions are available.

2018 ◽  
Vol 75 (10) ◽  
pp. 1563-1572 ◽  
Author(s):  
Ming Sun ◽  
Chongliang Zhang ◽  
Yong Chen ◽  
Binduo Xu ◽  
Ying Xue ◽  
...  

Data-limited methods (DLMs) in stock assessment may provide potential critical information for data-limited stock management. However, the sensitivity of those methods to life-history parameters is largely unknown, resulting in extra uncertainty and consequent risks. In the present study, we designed six parallel workflows (WFs) to incorporate classic and state-of-the-art methods of estimating life-history parameters and examined their influences on the assessment of small yellow croaker (Larimichthys polyactis) in Haizhou Bay, China. The sensitivity was evaluated with three objectives: (i) the evaluation of stock status with the spawning potential ratio following different assumptions; (ii) the length-based harvest control rules derived from three management procedures; and (iii) the management performance of these harvest control rules with simulation of management strategy evaluation. The results showed considerable sensitivity regarding the three objectives to the estimations with different WFs, indicating the previous practice of credulously accepting empirical values and indiscriminately selecting references are inadvisable. We also identified the most appropriate WFs used for different purposes with limited data, aiming to provide more reliable inputs for effective fisheries management.


2016 ◽  
Vol 73 (12) ◽  
pp. 1874-1884 ◽  
Author(s):  
Marc O. Nadon ◽  
Jerald S. Ault

Coastal fisheries are typically characterized by species-rich catch compositions and limited management resources, which typically leads to notably data-poor situations for stock assessment. Some parsimonious stock assessment approaches rely on cost-efficient size composition data, but these also require estimates of life history parameters associated with natural mortality, growth, and maturity. These parameters are unavailable for most exploited stocks. Here, we present a novel approach that uses a local estimate of maximum length and statistical relationships between key life history parameters to build multivariate probability distributions that can be used to parameterize stock assessment models in the absence of species-specific life history data. We tested this approach on three fish species for which empirical length-at-age and maturity data were available (from Hawaii and Guam) and calculated probability distributions of spawning potential ratios (SPR) at different exploitation rates. The life history parameter and SPR probability distributions generated from our data-limited analytical approach compared well with those obtained from bootstrap analyses of the empirical life history data. This work provides a useful new tool that can greatly assist fishery stock assessment scientists and managers in data-poor situations, typical of most of the world’s fisheries.


2018 ◽  
Vol 75 (3) ◽  
pp. 953-963 ◽  
Author(s):  
Sebastián A Pardo ◽  
Andrew B Cooper ◽  
John D Reynolds ◽  
Nicholas K Dulvy

Abstract Sensitivity to overfishing is often estimated using simple models that depend upon life history parameters, especially for species lacking detailed biological information. Yet, there has been little exploration of how uncertainty in life history parameters can influence demographic parameter estimates and therefore fisheries management options. We estimate the maximum intrinsic rate of population increase (rmax) for ten coastal carcharhiniform shark populations using an unstructured life history model that explicitly accounts for uncertainty in life history parameters. We evaluate how the two directly estimated parameters, age at maturity αmat and annual reproductive output b, most influenced rmax estimates. Uncertainty in age at maturity values was low, but resulted in moderate uncertainty in rmax estimates. The model was sensitive to uncertainty in annual reproductive output for the least fecund species with fewer than 5 female offspring per year, which is not unusual for large elasmobranchs, marine mammals, and seabirds. Managers and policy makers should be careful to restrict mortality on species with very low annual reproductive output <2 females per year. We recommend elasmobranch biologists to measure frequency distributions of litter sizes (rather than just a range) as well as improving estimates of natural mortality of data-poor elasmobranchs.


2019 ◽  
Vol 77 (1) ◽  
pp. 200-215
Author(s):  
Mikihiko Kai

Abstract Impacts of biological uncertainties on estimates of stock–recruitment relationships (SRRs) in elasmobranchs such as lamniform sharks were evaluated using a numerical approach based on an age-structured model considering reproductive ecology in elasmobranchs. The values of steepness were estimated using several combinations of life history parameters for North Pacific shortfin mako to elucidate whether the numerical approach could identify reasonable values for fundamental life history parameters as well as steepness. The results of the numerical approach indicated that the mean values of steepness and their 95% confidence intervals were highly sensitive to combinations of values for growth rate, maturity ogive, longevity, reproductive cycle, and natural mortality rate. Meanwhile, the most plausible combinations of the biological parameters and values of steepness were identified based on the numerical approach with biological knowledge. The mean values and their standard deviation (SD) for steepness with the Beverton-Holt-SRR model were 0.353 (SD=0.057) and 0.273 (SD=0.046) for 2- and 3-year reproductive cycles, respectively. The numerical approach therefore has high potential to become an important tool for estimating SRR in elasmobranchs such as lamniform sharks, and the application of this approach to other elasmobranchs could greatly contribute to improvements in stock assessment and management.


2013 ◽  
Vol 70 (6) ◽  
pp. 930-940 ◽  
Author(s):  
Marc Mangel ◽  
Alec D. MacCall ◽  
Jon Brodziak ◽  
E.J. Dick ◽  
Robyn E. Forrest ◽  
...  

We provide a perspective on steepness, reference points for fishery management, and stock assessment. We first review published data and give new results showing that key reference points are fixed when steepness and other life history parameters are fixed in stock assessments using a Beverton–Holt stock–recruitment relationship. We use both production and age-structured models to explore these patterns. For the production model, we derive explicit relationships for steepness and life history parameters and then for steepness and major reference points. For the age-structured model, we are required to generally use numerical computation, and so we provide an example that complements the analytical results of the production model. We discuss what it means to set steepness equal to 1 and how to construct a prior for steepness. Ways out of the difficult situation raised by fixing steepness and life history parameters include not fixing them, using a more complicated stock–recruitment relationship, and being more explicit about the information content of the data and what that means for policy makers. We discuss the strengths and limitations of each approach.


Author(s):  
Flávia Lucena-Frédou ◽  
Bruno Mourato ◽  
Thierry Frédou ◽  
Pedro G. Lino ◽  
Rubén Muñoz-Lechuga ◽  
...  

Holzforschung ◽  
2020 ◽  
Vol 74 (11) ◽  
pp. 1011-1020
Author(s):  
Danyang Tong ◽  
Susan Alexis Brown ◽  
David Corr ◽  
Gianluca Cusatis

AbstractRising global emission have led to a renewed popularity of timber in building design, including timber-concrete tall buildings up to 18 stories. In spite of this surge in wood construction, there remains a gap in understanding of long-term structural behavior, particularly wood creep. Unlike concrete, code prescriptions for wood design are lacking in robust estimates for structural shortening. Models for wood creep have become increasingly necessary due to the potential for unforeseen shortening, especially with respect to differential shortening. These effects can have serious impacts as timber building heights continue to grow. This study lays the groundwork for wood compliance prediction models for use in timber design. A thorough review of wood creep studies was conducted and viable experimental results were compiled into a database. Studies were chosen based on correlation of experimental conditions with a realistic building environment. An unbiased parameter identification method, originally applied to concrete prediction models, was used to fit multiple compliance functions to each data curve. Based on individual curve fittings, statistical analysis was performed to determine the best fit function and average parameter values for the collective database. A power law trend in wood creep, with lognormal parameter distribution, was confirmed by the results.


Sign in / Sign up

Export Citation Format

Share Document