scholarly journals First Report of Beet curly top virus-PeYD Associated With a New Disease in Chile Pepper Plants in Zacatecas, Mexico

Plant Disease ◽  
2017 ◽  
Vol 101 (3) ◽  
pp. 513 ◽  
Author(s):  
J. A. Mauricio-Castillo ◽  
L. R. Reveles-Torres ◽  
J. Mena-Covarrubias ◽  
G. R. Argüello-Astorga ◽  
R. Creamer ◽  
...  
Plant Disease ◽  
2010 ◽  
Vol 94 (5) ◽  
pp. 637-637 ◽  
Author(s):  
L. Qing ◽  
Y. Xiong ◽  
X. C. Sun ◽  
S. Y. Yang ◽  
C. Y. Zhou

In recent years, whitefly-transmitted begomovirues (family Geminiviridae) have caused severe leaf curl disease on tobacco and tomato in southern China, but have not been found on pepper. In August 2009, pepper plants (Capsicum frutescens) grown in the field in Panzhihua City of Sichuan Province (southwestern China), from where the occurrence of begomoviruses has not been reported previously, showed stunting, leaf yellowing, and mild curling symptoms. To identify possible begomoviruses, total DNA was extracted from three infected pepper plants (SC117, SC118, and SC119) with typical symptoms. Using degenerate primer pair PA/PB specific for members of the genus Begomovirus (2), a 500-bp DNA fragment covering parts of the intergenic region and V2 gene of the genome of begomoviruses was amplified from all samples. No amplification was observed from healthy plant extracts. The PCR product from SC118 was cloned and two clones were chosen to be sequenced. Alignment of the partial DNA sequences revealed that the cloned products from isolate SC118 were nearly identical (98.5%) and most closely related to Tobacco curly shoot virus isolate Y35 (TbCSV-[China:Yunnan 35:2001]; Accession No. AJ420318) (96.9 and 97.3% identity, respectively). Therefore, the entire genome of isolate SC118 was sequenced. Overlap primers TbCSV-F(5′-CCGCCGTCTCAACTTCGACAG-3′) and TbCSV-R(5′-ATCTGCTGGTCGCTTCGACAT-3′) were designed to amplify the full-length genome of SC118. The complete genome sequence of SC118 was determined to be 2,746 nucleotides (Accession No. GU001879) long, with two open reading frames (ORFs) in the virion-sense strand and four ORFs in the complementary-sense strand, typical of the Old World begomoviruses. A comparison with other reported sequences of begomoviruses shows that the genome of SC118 shares the highest nucleotide sequence identity (99.7%) with TbCSV-[China:Yunnan 35:2001]. When PCR was used to detect TbCSV from the other two isolates (SC117 and SC119) with TbCSV specific primer pair Y35F1 and Y35+10R (4), which amplified the fragment covering the whole C2 and C3 genes and the partial C1 and V1 genes of the genome of TbCSV, an amplicon of approximately 1.0 kb was obtained from all samples. To determine whether a satellite molecule was associated with the three virus isolates, a universal betasatellite abutting primer pair (beta01 and beta02) was used (1). No amplification product was detected. In previous studies, it was demonstrated that only 11 isolates were associated with betasatellites among 39 TbCSV-infected, field-collected samples (3), and betasatellites could be associated with noncognate begomoviruses (4). Therefore, the three isolates examined in this study are too few to come to a conclusion that betasatellites are not associated with TbCSV infection of pepper plants. A detailed search for the presence of betasatellites needs to be conducted to draw a definitive conclusion. The above results confirmed that samples SC117, SC118, and SC119 were infected by TbCSV. To our knowledge, this is the first report of TbCSV on pepper in China. References: (1) R. W. Briddon et al. Mol. Biotechnol. 20:317, 2002. (2) D. Deng et al. Ann. Appl. Biol. 125:327, 1994. (3) Z. Li et al. Phytopathology 95:902, 2005. (4) L. Qing et al. Phytopathology 99:716, 2009.


Plant Disease ◽  
2017 ◽  
Vol 101 (7) ◽  
pp. 1334 ◽  
Author(s):  
L-F. Chen ◽  
O. Batuman ◽  
B. J. Aegerter ◽  
J. Willems ◽  
R. L. Gilbertson

Plant Disease ◽  
2011 ◽  
Vol 95 (11) ◽  
pp. 1482-1482 ◽  
Author(s):  
J. A. Vargas ◽  
E. Hernández ◽  
N. Barboza ◽  
F. Mora ◽  
P. Ramírez

In September 2008, a survey of whiteflies and whitefly-borne viruses was performed in 11 pepper-growing greenhouses in the province of Cartago, Costa Rica. During this survey, the vast majority of sweet pepper (Capsicum annuum cv. Nataly) plants showed interveinal chlorosis, enations, necrosis, and mild upward leaf curling. Large populations of whiteflies were present and they were found to be composed only of Trialeurodes vaporariorum. Total RNA from frozen plant samples was extracted with TRI Reagent (Molecular Research Inc., Cincinnati, OH). RevertAid H Minus Reverse Transcriptase Kit (Fermentas, Hanover, MD) was used for reverse transcription of the total RNA extract, with cDNA synthesis directed using random primers. A real-time PCR assay was performed to detect Tomato chlorosis virus (ToCV) (genus Crinivirus, family Closteroviridae) using the SYBR Green PCR Master Mix (Applied Biosystems, Carlsbad, CA). Three sets of primers were used to confirm the presence of ToCV in the samples: TocQ875F/TocQ998R primer set directed to a fragment of 123 bp of the HSP gene (3); ToCVp22RQF (5′-TGGATCTCACTGGTTGCTTG-3′)-ToCVp22RQR (5′-TAGTGTTTCAGCGCCAACAG-3′) primer pair that amplifies a 198-bp segment of the ToCV p22 gene (R. Hammond, E. Hernandez, J. Guevara, J. A. Vargas, A. Solorzano, R. Castro, N. Barboza, F. Mora, and P. Ramirez, unpublished) and the ToCVCPmRQF (5′-CATTGGTTGGGGATTACGTC-3′)-ToCVCPmRQR (5′-TCTCAGCCTTGACTTGAGCA-3′) primer pair designed to amplify a 170-bp portion of the ToCV CPm gene (R. Hammond, E. Hernandez, J. Guevara, J. A. Vargas, A. Solorzano, R. Castro, N. Barboza, F. Mora and P. Ramirez, unpublished). Fifteen symptomatic samples per greenhouse were tested for a total of 165 sweet pepper plants. From this total, seven samples from four different greenhouses produced amplification of PCR products with all three sets of primers. One of the seven samples showed mild chlorosis, but others were highly chlorotic with different levels of upward leaf curling. None of the other samples showed amplification with any of the primer sets; the symptoms on these plants could have been due to nutritional deficiencies or infection by viruses. Sequence analysis of the 460-bp HSP PCR products, produced using previously reported primers (3), and 150-bp fragment of the P22 revealed 100% sequence identity with a tomato isolate of ToCV from the United States (GenBank Accession No. AY903448). Because of the low number of samples infected with ToCV and the high incidence of symptoms, DNA extraction and a begomovirus PCR detection assay was performed using primer pair AV494/AC1048 (4). Negative results were obtained for all samples. To our knowledge, this is the first report of ToCV infecting sweet pepper plants in Costa Rica and the third one worldwide. ToCV has also been found to be infecting tomato in open field and greenhouses (1) and other weeds in greenhouses including Ruta chalepensis (Rutaceae), Phytolacca icosandra (Phytolaccaceae), Plantago major (Plantaginaceae), and Brassica sp. (Brassicaceae) (2) in the same region of Costa Rica, suggesting that it has adapted to the conditions of the area and poses an important threat to the vegetable production. References: (1) R. M. Castro et al. Plant Dis. 93:970, 2009. (2) A. Solorzano-Morales et al. Plant Dis. 95:497, 2011. (3) W. M. Wintermantel et al. Phytopathology 98:1340, 2008. (4) S. Wyatt and J. Brown. Phytopathology 86:1288, 1996.


Plant Disease ◽  
1999 ◽  
Vol 83 (12) ◽  
pp. 1176-1176 ◽  
Author(s):  
J. Reina ◽  
G. Morilla ◽  
E. R. Bejarano ◽  
M. D. Rodríguez ◽  
D. Janssen

Infection of tomato crops by tomato yellow leaf curl virus (TYLCV) has occurred annually in southern Spain since 1992. In 1997, TYLCV also was reported in common bean (Phaseolus vulgaris) (2) in southern Spain. During the summer of 1999, we observed pepper plants (Capsicum annuum) from a greenhouse in Almería (Spain) exhibiting clear leaf internervial and marginal chlorosis and upward curling of the leaflet margin. Total nucleic acids were extracted from five plants with symptoms and analyzed by Southern blot hybridization and polymerase chain reaction (PCR). As a probe, we used a plasmid (pSP72/97) encompassing the complete genome of the Spanish isolate of TYLCV-IS (1). A positive signal was obtained from three samples. A pair of primers (OTYA3/OTYA6) designed to amplify TYLCV was used for detection in samples (OTYA3: GGGTCGACGTCATCAATGACG; OTYA6: CTACATGAGAATGGGGAACC). Using PCR, we were able to obtain fragments of the expected sizes (649 bp for OTYA3/OTYA6) from four of five samples analyzed. Amplified fragments were later analyzed by restriction fragment length polymorphism with three cutter enzymes (AluI, RsaI, and HinfI). The restriction pattern obtained in all cases corresponded with the Spanish isolate of TYLCV-IS. One of the fragments amplified with OTYA3/OTYA6 was fully sequenced. The sequence was 100% identical to that previously reported for the Spanish isolate of TYLCV-IS. This is the first report of TYLCV infection in C. annuum, which is one of the most important commercial crops in southeastern Spain. Work is in progress to determine whether the presence of TYLCV-IS in pepper plants is responsible for the symptoms described here. References: (1) J. Navas-Castillo et al. Plant Dis. 81:1461, 1997. (2) J. Navas-Castillo et al. Plant Dis. 83:29, 1999.


Plant Disease ◽  
2021 ◽  
Author(s):  
Shuwu Zhang ◽  
Jinhuan Chen ◽  
Lijun Ma ◽  
Enchen Li ◽  
Baoli Ji ◽  
...  

Wilting of branches and leaves was observed on 4-5 year old apple trees of the varieties Delicious and Fuji in orchards located in Wushan, Gansu Province, China in April 2018. Subsequently, the stem vascular tissue and woody xylem became discolored and necrotic. The stem dieback expanded rapidly to the entire vasculature of the branches. Finally, the epidermis of the stem bases split and was covered with light pink mold. For the pathogen isolation, 25 symptomatic stems were collected from 25 symptomatic trees in 3 individual orchards. Fragments (approximately 0.5 cm in length × 0.5 cm in width) of symptomatic stems were surface sterilized and individually transferred to Petri dishes containing potato dextrose agar (PDA), and incubated for 4 days at 25°C. Five types of isolates with distinct morphological characteristics (PJ1 to PJ5) were obtained from the 25 symptomatic stems after the single spore inoculation and sub-culture. The isolation frequency of PJ1, PJ2, PJ3, PJ4 and PJ5 types was 11%, 8%, 100%, 4% and 13%, respectively, in the 25 symptomatic stems. A spore suspension of PJ1, PJ2, PJ3, PJ4 and PJ5 types was prepared by adding 5 ml of sterile distilled water in the 14-day old culture colonies and filtered through 0.22 mm Millipore membranes, and the final concentration was adjusted to 108 per ml for inoculation. Detached healthy apple stems (15 cm in length) were surface-disinfested and used to evaluate the pathogenicity of PJ1 (7 isolates), PJ2 (5 isolates), PJ3 (32 isolates), PJ4 (2 isolates) and PJ5 (9 isolates) by dipping the stems into sterilised tubs containing the spore suspension (108 per ml) of each isolate. Apple stems dipped in sterile distilled water served as the control. Each control and treatment were repeated 3 times. At day 15 and 35, the stems infected with the spore suspension of PJ3 isolates developed symptoms that were similar to those observed in the apple orchards. However, the other four types (PJ1, PJ2, PJ4 and PJ5) exhibited either no symptoms or different symptoms from those observed in the apple orchards. There were no symptoms on the control stems. After the colony of the pathogen (PJ3 type) was re-isolated from the infected stem bases 35 days inoculation. The PJ3 type isolates with same morphological characteristics as the original PJ3 type isolates were used for further examination and identification. After 4 days of incubation on PDA, the colonies of PJ3 type isolates developed velvety aerial mycelia with white or light pink color when they were viewed from the front/top side of the PDA and orange-red color when they were viewed from the reverse/bottom side. After 14 days of incubation, the color in the centre of the colonies changed to yellow green in the front view and carmine red in the reverse view of the plates. Three types of spores (microconidia, macroconidia and chlamydospores) were observed after incubation of PJ3 type isolates for 14 days. The size (width and length) of 30 conidia in each of PJ3 type isolates was measured and averaged. The microconidia were abundant on aerial mycelia and limoniform, oval or pyriform with 0-1 septa. Their size ranged from 1.94 μm to 8.05 μm in length and 1.48 μm to 3.62 μm in width. The macroconidia were falciform and curved in shape, mostly with 3-5 septa and a size ranging from 13.52 μm to 22.43 μm in length and 2.31 μm to 3.87 μm in width. The chlamydospores were spherical, intercalary and formed in chains on PDA plates. These morphological characteristics indicate that the PJ3 type isolates could be Fusarium tricinctum (Chen et al. 2019; Aktaruzzaman et al. 2018). To confirm the morphological identification, the sequences of internal transcribed spacer (ITS), transcriptional enhancer factor-1 (TEF-lα) and ribosomal RNA large subunit gene (LSU) of the representative isolate PJ3-3 selected from the PJ3 type isolates with same morphological characteristics were sequenced and used for molecular identification (Laurence et al. 2011; Abd-Elsalam et al. 2003; Miller et al. 1996). The sequences of ITS, TEF-lα and LSU of the PJ3-3 isolate were deposited in NCBI database with the accession numbers of MZ799356, MZ820045 and MZ820044, respectively. In BLAST analyses, the obtained sequences of the PJ3-3 isolate showed 99.47%, 100% and 99.01% identity to the corresponding region of F. tricinctum ITS (JX179207.1: 3-566 Fusarium tricinctum isolate Fyx 1), TEF-lα (MK032320.1 F. tricinctum isolate ZD3) and LSU (KC311496.1 Fusarium tricinctum isolate L12), respectively. The phylogenetic analysis clustered the PJ3-3 isolate sequences within the same clade with ITS, TEF-lα and LSU sequences of F. tricinctum isolates. Thus, the PJ3-3 isolate was identified as F. tricinctum based on the pathogenicity tests, morphological characteristics and molecular analyses. Previously, the symptoms of xylem browning and dieback were observed in the twigs of wild apple trees that were collected from wild apple forests, and the species F. avenaceum, F. solani, F. tricinctum, F. proliferatum, and F. sporotrichioides were isolated from diseased wild apple trees (Chen et al. 2019). Only F. avenaceum, F. solani, F. proliferatum, and F. sporotrichioides were reported as the pathogens causing the disease symptoms of xylem browning and dieback in wild apple trees in Xinjiang, China (Chen et al. 2019). In our present study, we found that F. tricinctum can cause stem vascular and woody xylem browning, wilting, and dieback in the apple tree varieties Delicious and Fuji. These are new symptoms discovered in our present research and different from the previous paper (Chen et al. 2019). Therefore, to our knowledge, this study is the first report of F. tricinctum causing a new disease on apple trees in China following Koch’s postulates. Our findings are important for the management of apple disease and protect apple trees in the future.


2013 ◽  
Vol 14 (1) ◽  
pp. 49 ◽  
Author(s):  
Kassie Conner ◽  
Edward J. Sikora ◽  
Lee Zhang ◽  
Charles Burmester

Soybean vein necrosis-associated virus (SVNaV) is a relatively new disease of soybeans in the United States. This is the first report of SVNaV in Alabama. The disease was confirmed to be SVNaV by ELISA and sequencing virus specific PCR products. Confirmation of the disease in Alabama is an important step in developing management recommendations for growers. Accepted for publication 10 May 2013. Published 29 July 2013.


Plant Disease ◽  
2020 ◽  
Vol 104 (3) ◽  
pp. 999-999 ◽  
Author(s):  
Y. Giladi ◽  
L. Hadad ◽  
N. Luria ◽  
W. Cranshaw ◽  
O. Lachman ◽  
...  

Plant Disease ◽  
2019 ◽  
Vol 103 (11) ◽  
pp. 2972 ◽  
Author(s):  
K. F. C. Pantoja ◽  
B. R. De Marchi ◽  
R. Krause-Sakate ◽  
T. Mituti ◽  
J. A. M. Rezende ◽  
...  

Plant Disease ◽  
2018 ◽  
Vol 102 (8) ◽  
pp. 1653-1653 ◽  
Author(s):  
J. A. Mauricio-Castillo ◽  
L. R. Reveles-Torres ◽  
M. A. Salas-Luévano ◽  
A. Franco-Bañuelos ◽  
M. A. Salas-Marina ◽  
...  

2003 ◽  
Vol 67 (6) ◽  
pp. 1781-1789 ◽  
Author(s):  
Magdalena Villa-Castorena ◽  
April L. Ulery ◽  
Ernesto A. Catalán-Valencia ◽  
Marta D. Remmenga

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