First Report of Soybean vein necrosis-associated virus Affecting Soybeans in Alabama

2013 ◽  
Vol 14 (1) ◽  
pp. 49 ◽  
Author(s):  
Kassie Conner ◽  
Edward J. Sikora ◽  
Lee Zhang ◽  
Charles Burmester
Keyword(s):  
United States ◽  
The United States ◽  
New Disease ◽  
First Report ◽  
Specific Pcr ◽  
Pcr Products ◽  
Vein Necrosis ◽  
Management Recommendations

Soybean vein necrosis-associated virus (SVNaV) is a relatively new disease of soybeans in the United States. This is the first report of SVNaV in Alabama. The disease was confirmed to be SVNaV by ELISA and sequencing virus specific PCR products. Confirmation of the disease in Alabama is an important step in developing management recommendations for growers. Accepted for publication 10 May 2013. Published 29 July 2013.

scholarly journals First report of Coleus blumei viroid 1 in commercial Coleus blumei in the United States

Plant Disease ◽  
2021 ◽  
Author(s):  
Gardenia Orellana ◽  
Alexander V Karasev
Keyword(s):  
United States ◽  
Leaf Tissue ◽  
The United States ◽  
Universal Primers ◽  
Rt Pcr ◽  
Universal Primer ◽  
Tissue Samples ◽  
First Report ◽  
Specific Pcr ◽  
Coleus Blumei

Coleus scutellarioides (syn. Coleus blumei) is a widely grown evergreen ornamental plant valued for its highly decorative variegated leaves. Six viroids, named Coleus blumei viroid 1 to 6 (CbVd-1 to -6) have been identified in coleus plants in many countries of the world (Nie and Singh 2017), including Canada (Smith et al. 2018). However there have been no reports of Coleus blumei viroids occurring in the U.S.A. (Nie and Singh 2017). In April 2021, leaf tissue samples from 27 cultivars of C. blumei, one plant of each, were submitted to the University of Idaho laboratory from a commercial nursery located in Oregon to screen for the presence of viroids. The sampled plants were selected randomly and no symptoms were apparent in any of the samples. Total nucleic acids were extracted from each sample (Dellaporta et al. 1983) and used in reverse-transcription (RT)-PCR tests (Jiang et al. 2011) for the CbVd-1 and CbVd-5 with the universal primer pair CbVds-P1/P2, which amplifies the complete genome of all members in the genus Coleviroid (Jiang et al. 2011), and two additional primer pairs, CbVd1-F1/R1 and CbVd5-F1/R1, specific for CbVd-1 and CbVd-5, respectively (Smith et al. 2018). Five C. blumei plants (cvs Fire Mountain, Lovebird, Smokey Rose, Marrakesh, and Nutmeg) were positive for a coleviroid based on the observation of the single 250-nt band in the RT-PCR test with CbVds-P1/P2 primers. Two of these CbVd-1 positive plants (cvs Lovebird and Nutmeg) were also positive for CbVd-1 based on the presence of a single 150-nt band in the RT-PCR assay with CbVd1-F1/R1 primers. One plant (cv Jigsaw) was positive for CbVd-1, i.e. showing the 150-nt band in RT-PCR with CbVd1-F1/R1 primers, but did not show the ca. 250-bp band in RT-PCR with primers CbVds-P1/P2. None of the tested plants were positive for CbVd-5, either with the specific, or universal primers. All coleviroid- and CbVd-1-specific PCR products were sequenced directly using the Sanger methodology, and revealed whole genomes for five isolates of CbVd-1 from Oregon, U.S.A. The genomes of the five CbVd-1 isolates displayed 96.9-100% identity among each other and 96.0-100% identity to the CbVd-1 sequences available in GenBank. Because the sequences from cvs Lovebird, Marrakesh, and Nutmeg, were found 100% identical, one sequence was deposited in GenBank (MZ326145). Two other sequences, from cvs Fire Mountain and Smokey Rose, were deposited in the GenBank under accession numbers MZ326144 and MZ326146, respectively. To the best of our knowledge, this is the first report of CbVd-1 in the United States.

scholarly journals First Report of Peanut mottle virus in Forage Peanut (Arachis pintoi) in the United States

2018 ◽  
Vol 19 (1) ◽  
pp. 13-14
Author(s):  
K. K. Dey ◽  
L. Hassell ◽  
C. Li ◽  
M. Elliott ◽  
X. Sun
Keyword(s):  
United States ◽  
The United States ◽  
Mottle Virus ◽  
Arachis Glabrata ◽  
First Report ◽  
Arachis Pintoi ◽  
Reverse Transcription Pcr ◽  
The World ◽  
Pcr Products ◽  
The Many

Arachis pintoi is one of the many perennial peanuts grown in many tropical and subtropical countries around the world. Although Peanut mottle virus (PeMoV) was reported in Arachis glabrata from Georgia in 2007, there are no reports of PeMoV infecting A. pintoi in the United States. In June 2017, samples of A. pintoi that originated from Hardee County, FL, plants showed a variety of symptoms ranging from yellowing to dark islands, green vein banding, and mild mottling. They tested positive initially with broad-spectrum lateral flow antibody immunoassay and later were confirmed by sequencing the reverse-transcription PCR products. Detection of PeMoV in A. pintoi is significant because it is transmitted by aphids in a nonpersistent manner and is seed-borne in A. hypogea. It is not known if PeMoV is seed-borne in A. pintoi. However, A. pintoi is commonly vegetatively propagated using stolon cuttings. It is possible that PeMoV can spread to A. pintoi in Florida by all these means, making maintenance of virus-free propagation stock plants important. To our knowledge, this is the first report of PeMoV in A. pintoi the United States.

scholarly journals First Report of Five Sooty Blotch and Flyspeck Fungi on Prunus americana in the United States

Plant Disease ◽  
2007 ◽  
Vol 91 (12) ◽  
pp. 1685-1685 ◽  
Author(s):  
J. Latinović ◽  
J. C. Batzer ◽  
K. B. Duttweiler ◽  
M. L. Gleason ◽  
G. Sun
Keyword(s):  
United States ◽  
The United States ◽  
Apple Fruit ◽  
Economic Losses ◽  
Research Station ◽  
First Report ◽  
Sooty Blotch ◽  
Sooty Blotch And Flyspeck ◽  
Pcr Products ◽  
Pure Cultures

The sooty blotch and flyspeck (SBFS) complex includes more than 30 fungi that blemish the cuticle of apple fruit, causing economic losses in humid regions worldwide (1). In August 2005, we sampled SBFS-infested wild plum (Prunus americana) fruit growing in hedgerows in Iowa. Colonies were categorized according to mycelial type (1), and isolates were made from representative colonies onto acidified water agar (AWA). Plum skins with SBFS signs were excised, pressed, and photographed. DNA was obtained from purified isolates and also from mycelium and fruiting bodies scraped directly from plum fruit skins. Extracted DNA was amplified using primer pair ITS1-F/Myc1-R (ACTCGTCGAAGGAGCTACG) and PCR products were sequenced using primer pair ITS-1F/ITS4. Six sequences were obtained from pure cultures and seven from colonies on plum fruit skin. BLAST analysis of the 470-bp sequences showed 100% homology to five known species in the SBFS complex: Zygophiala cryptogama, Zygophiala wisconsinensis, Pseudocercosporella sp. RH1, and Stomiopeltis spp. RS1 and RS2 (GenBank Accession Nos. AY598854, AY598853, AY5988645, AY598882, and AY598883, respectively). Observations of colony and fruiting structure morphology from cultures on potato dextrose agar (PDA) and colonies on plums confirmed species identity. A modified version of Koch's postulates was conducted to verify that these fungi caused the signs observed on plum and could also infest apple fruit. In June 2006, 1-month-old cultures on PDA were pulverized in a blender with sterile distilled water, passed through four layers of sterile cheesecloth, and transferred to sterile jars. Each isolate was inoculated onto 20 fruit on plum trees (P. americana) on the Iowa State University (ISU) campus and 20 fruit on cv. Golden Delicious apple trees at the ISU Research Station, Gilbert, IA. Each fruit was disinfested with 70% ethanol, air dried, swabbed with inoculum, and covered with a Fuji bag. At harvest, fungal colonies on fruit were reisolated onto AWA. DNA was extracted from pure cultures; when isolations on agar were unsuccessful, DNA was extracted directly from colonies on fruit. PCR was conducted using ITS1-F/Myc1-R, and PCR products were sequenced using ITS1-F/ITS4. All five species were reisolated and sequenced from apple. Pseudocercosporella sp. RH1 and Stomiopeltis sp. RS1 were sequenced from inoculated plums. Although flyspeck, presumably caused by Schizothyrium pomi, was reported on Japanese plum (P. salicina) in Japan (2) and black cherry (P. serotina) in the United States (3), to our knowledge this is the first report of SBFS fungi on plum in the United States and the first confirmation that fungi from plum can produce SBFS signs on apple fruit. Wild plum may therefore act as a reservoir host, providing inoculum for SBFS infestations on apple. References: (1) J. Batzer et al. Mycologia 97:1268, 2005. (2) H. Nasu and H. Kunoh. Plant Dis. 71:361, 1987. (3) T. B. Sutton. Plant Dis. 72:801, 1988.

scholarly journals First Report of Puccinia lagenophorae on Common Groundsel (Senecio vulgaris) in Canada

Plant Disease ◽  
2007 ◽  
Vol 91 (8) ◽  
pp. 1058-1058 ◽  
Author(s):  
W. L. Bruckart ◽  
A. S. McClay ◽  
S. Hambleton ◽  
R. Tropiano ◽  
G. Hill-Rackette
Keyword(s):  
United States ◽  
Its Region ◽  
The United States ◽  
Representative Specimen ◽  
Rust Disease ◽  
First Report ◽  
Senecio Vulgaris ◽  
Pcr Products ◽  
Plant Pathol ◽  
Common Groundsel

Rust disease on common groundsel was independently collected from two backyard gardens in Alberta, Canada during 2005, the first on September 11 in Sherwood Park (53.542°N, 113.262°W) and the second on September 18 in Edmonton (53.463°N, 113.593°W). Leaves of each specimen had clusters of orange, cup-shaped aecia, bordered by recurved peridia, the principal macroscopic signs of disease. Infected plants had twisted stems and deformed leaves. Spores of isolates from the two locations were (mean diameter [± s.d.; range]) 14.6 (± 1.4; 11.4 to 18.9) × 12.5 (± 1.1; 9.1 to 16.2) μm, orange, oval or angular, and many had refractive granules (3). Genomic DNA was extracted from small leaf pieces with multiple aecia, and the complete internal transcribed spacer (ITS) region of the rust was sequenced from PCR products. The sequences determined for a representative specimen from each location were identical, including two areas of ambiguity in the ITS1 spacer region. At position 7 were two overlapping peaks (A and C), and near position 130, sequencing failed because of a suspected insertion/deletion in some ITS copies. Difficulties of sequencing through this cytosine-rich area were reported by Littlefield et al. (3). Data from cloned PCR products confirmed the presence of two ITS genotypes in each DNA extract, one identical to a sequence published for Puccinia lagenophorae on Senecio vulgaris from the United Kingdom (GenBank Accession No. AY808060 (2), and the other identical to a sequence from the United States (GenBank Accession No. AY852264) (3). They differ by an A/C transversion at position 7 and an indel, an 8/9 base poly-C run beginning at position 130. Telia and teliospores were not observed in any of the 2005 samples (some collected as late as November) or in the 2006 Edmonton site samples. Identification of the pathogen as P. lagenophorae was based on host plant symptoms (3) and molecular characters. The original source of inoculum for these infections is unknown, but on December 5, 2006, diseased specimens with sporulating aecia were found beneath 45 cm of snow at the Edmonton location, in a garden area that had not been weeded during the summer. There is reported evidence that teliospores are not functional and that P. lagenophorae overwinters on infected plants that develop aecia in the spring (1). Specimens have been deposited at the Arthur Herbarium, Purdue University, West Lafayette, IN (Vouchers PUR N5414–N5417) and the National Mycological Herbarium of Canada, Ottawa, ON (Vouchers DAOM 237844, 237845, 237961, 237962, 237982, and 237990). The two cloned variants of the ITS sequence were deposited in GenBank (Accession Nos. EF212446 and EF212447). To our knowledge, this is the first report of groundsel rust caused by P. lagenophorae in Canada (G. Barron, personal communication, has images from Guelph in 2004 but no specimens were examined or preserved). Groundsel rust has been found at several locations in the United States (3) and has been reported on more than 60 species in several genera (4). Questions remain about the amount of damage that P. lagenophorae will cause to groundsel in North America and whether it will affect native Senecio species and their relatives. References: (1) J. Frantzen and H. Müller-Schärer. Plant Pathol. 48:483, 1999. (2) B. Henricot and G. Denton. Plant Pathol. 54:242, 2005. (3) L. Littlefield et al. Ann. Appl. Biol. 147:35, 2005. (4) M. Scholler. J. Plant Dis. Prot. 105:239, 1998.

scholarly journals First Report of Raspberry bushy dwarf virus in Andean Blackberry (Rubus glaucus) in Central Ecuador

Plant Disease ◽  
2013 ◽  
Vol 97 (7) ◽  
pp. 1003-1003 ◽  
Author(s):  
D. F. Quito-Avila ◽  
M. A. Ibarra ◽  
R. A. Alvarez ◽  
L. Espinoza ◽  
M. F. Ratti ◽  
...  
Keyword(s):  
United States ◽  
Rna Viruses ◽  
The United States ◽  
Dwarf Virus ◽  
First Report ◽  
The Andes ◽  
Raspberry Bushy Dwarf Virus ◽  
Pcr Products ◽  
Symptomatic Tissue ◽  
Production Areas

During the past two decades, several viruses have been identified from Rubus spp. in wild and commercial plantings around the world (2). In Ecuador, approximately 14 tons of blackberries are produced each year from an estimated area of 5,500 ha. In 2012, a preliminary survey was conducted to determine the presence of RNA viruses in Rubus glaucus, the most prevalent blackberry in Ecuador. Fifteen plants showing leaf mottling and severe mosaic were leaf-sampled from each of five different fields in Azuay Province. A total of 12 pooled samples of 20 g were obtained from the collected symptomatic tissue and used for dsRNA extraction using a cellulose-based protocol for detection of RNA viruses in plants (3). Three dsRNA segments of approximately 5 kbp, 2 kbp, and 900 bp were observed from all 12 dsRNA preparations. The dsRNA was heat-denatured and used as template for the generation of cDNA library using the universal random primer 5′-GCCGGAGCTCTGCAGAATTCNNNNNN-3′, for reverse transcription (RT), and the anchor primer 5′-GCCGGAGCTCTGCAGAATTC-3′for PCR as described (1). The PCR products were cloned using a StrataClone Kit (Agilent, CA) and sequenced (Macrogen, Korea). Sequence analysis revealed the presence of Raspberry bushy dwarf virus (RBDV), a pollen-borne Idaeovirus naturally found in several Rubus spp. worldwide. Approximately 120 RBDV sequences obtained from the Ecuadorean isolate were assembled into two contigs belonging to RNA1 and RNA2. Both sequences were re-confirmed by RT-PCR using specific primers. Partial sequences were assigned GenBank Accessions KC315894, KC315893, and KC315892 for the replicase, MP and CP, respectively. Furthermore, BLAST searches showed that the nucleotide sequence corresponding to the replicase was 95% similar to an isolate from the resistance breaking R15 strain (S51557.1), whereas the MP and CP nucleotide sequences were up to 98% similar to a Slovenian isolate (EU796088.1). Primers designed to amplify a 427-bp portion of the CP were used to detect RBDV from four blackberry plantings in two distant production areas: Ambato in Tungurahua Province and Paute in Azuay Province. Leaf mottling and severe mosaic was observed in 90% of blackberry fields in those two locations. Leaf samples (n = 90) were randomly collected from both symptomatic and asymptomatic plants in each location. In Ambato, RBDV was detected in 50% and 40% of symptomatic and asymptomatic plants, respectively. In Paute, RBDV was present in 70% of symptomatic plants and 29% of asymptomatic plants. The presence of RBDV in asymptomatic plants suggests the virus might not be the sole causal agent of the disorder. Further studies are needed to determine the role of RBDV in the observed symptoms, since virus complexes responsible for increased severity of symptoms have been commonly reported in Rubus spp. (4). R. glaucus is native to the tropical highlands (from Ecuador to Mexico) and differs from blackberries commercially grown in the United States and Europe. Therefore, RBDV-induced symptoms reported in blackberry grown in the United States and Europe may not be extrapolated to the Andes berry. To the best of our knowledge, this is the first report of RBDV from blackberry in Ecuador. References: (1) P. Froussard. Nucleic Acids Res. 20:2900, 1992. (2) R. R. Martin et al. Plant Dis. 97:168, 2013. (3). T. J. Morris and J. A. Dodds. Phytopathology 69:854. 1979. (4) D. F. Quito-Avila et al. J. Virol. Methods 179:38, 2012.

scholarly journals First Report of Soybean Vein Necrosis Virus Infecting Kudzu (Pueraria montana) in the United States of America

Plant Disease ◽  
2018 ◽  
Vol 102 (8) ◽  
pp. 1674-1674 ◽  
Author(s):  
J. Zhou ◽  
N. Aboughanem-Sabanadzovic ◽  
S. Sabanadzovic ◽  
I. E. Tzanetakis
Keyword(s):  
United States ◽  
United States Of America ◽  
The United States ◽  
Necrosis Virus ◽  
First Report ◽  
Vein Necrosis ◽  
Pueraria Montana

scholarly journals First report of dasheen mosaic virus infecting taro (Colocasia esculenta) in Louisiana

Plant Disease ◽  
2021 ◽  
Author(s):  
Cesar Escalante ◽  
David Galo ◽  
Rodrigo Diaz ◽  
Rodrigo Valverde
Keyword(s):  
United States ◽  
Mosaic Virus ◽  
Consensus Sequence ◽  
The United States ◽  
Colocasia Esculenta ◽  
Rt Pcr ◽  
Serological Tests ◽  
First Report ◽  
Pcr Products ◽  
The University

Taro [Colocasia esculenta (L.) Schott], also called dasheen or malanga is an important staple crop in many tropical and subtropical countries (Chaïr et al. 2016). In October 2020, taro plants showing foliar symptoms consisting of mosaic, feathery mottle, and vein clearing patterns were observed in the Hilltop Arboretum, the Bluebonnet Swamp Nature Center, the Louisiana State University Agricultural Center Botanic Gardens, and the University Lake, in Baton Rouge, Louisiana. Unidentified aphids were also observed infesting the plants showing the described symptoms. From each location, two foliar samples from symptomatic and two from asymptomatic plants were collected and tested by ELISA using antiserum for general potyvirus group (Agdia, Elkhart, IN). Seven of eight symptomatic samples tested positive while the asymptomatic samples were negative. The seven positive samples were used to perform an additional ELISA test using antiserum specific for dasheen mosaic virus (DsMV) (Agdia). All seven samples tested positive for DsMV. To confirm the identity of the virus, total RNA was extracted from the seven samples using the PureLink® Plant RNA Reagent Kit (Invitrogen, Carlsbad, CA). After DNA digestion with PerfeCta® DNase I (Qiagen, Beverly, MA), the RNA was used to perform reverse transcription polymerase chain reaction (RT-PCR) with primer set DMV 5708-5731-F/DMV 6131-6154-R which is specific for DsMV (Wang et al. 2017). RT-PCR was performed using the AccessQuickTM RT-PCR System (Promega, Madison, WI) following the reaction conditions described by Wang et al. PCR products of the expected size (~447 bp) were obtained with all seven samples and were Sanger-sequenced. A consensus sequence (MW284936) was obtained with the two sequences from samples collected at the University Lake and aligned with other sequences available in the GenBank using BLASTn. Our isolate of DsMV showed 90.6% nt identity to an isolate of DsMV from Ethiopia (MG602229). Mechanical inoculations to healthy taro plants were conducted using leaf tissue of symptomatic plants as source of inoculum. Inoculated plants exhibited mosaic symptoms three weeks after inoculation and were ELISA-positive for DsMV. Symptomatology, serological tests, RT-PCR testing, and DNA sequencing of RT-PCR products support that the symptomatic taro plants were infected with DsMV. Taro is a crop in Hawaii, but in the contiguous United States, it is mostly grown as an ornamental and is considered an invasive species. Its distribution is restricted to the southern continental states and Hawaii (Cozad et al. 2018). CABI, EPPO (1998) lists the presence of DsMV in several states of the United States, including Louisiana; however, there is no record in the literature of the identification of this virus in Louisiana. The potential impact of DsMV in taro and related ornamental species in southern United States is unknown. To the best of our knowledge, this is the first report documenting DsMV infecting taro in Louisiana.

First Report of Pathogenicity of Fusarium sporotrichioides and Fusarium acuminatum on Sunflowers in the United States

2010 ◽  
Vol 11 (1) ◽  
pp. 42 ◽  
Author(s):  
F. Mathew ◽  
B. Kirkeide ◽  
T. Gulya ◽  
S. Markell
Keyword(s):  
United States ◽  
Helianthus Annuus ◽  
The United States ◽  
Fusarium Sporotrichioides ◽  
Charcoal Rot ◽  
Koch’S Postulates ◽  
First Report ◽  
Fusarium Acuminatum ◽  
Helianthus Annuus L ◽  
Koch's Postulates

Widespread infection of charcoal rot was observed in a commercial sunflower field in Minnesota in September 2009. Based on morphology, isolates were identified as F. sporotrichioides and F. acuminatum. Koch's postulates demonstrated pathogencity of both species. To our knowledge, this is the first report of F. sporotrichoides and F. acuminatum causing disease on Helianthus annuus L. in the United States. Accepted for publication 23 August 2010. Published 15 September 2010.

scholarly journals First Report of Wisteria vein mosaic virus in Wisteria sinensis in the United States of America

2008 ◽  
Vol 9 (1) ◽  
pp. 42 ◽  
Author(s):  
Rayapati A. Naidu ◽  
Gandhi Karthikeyan
Keyword(s):  
United States ◽  
Mosaic Virus ◽  
United States Of America ◽  
The United States ◽  
Home Gardens ◽  
First Report ◽  
Woody Perennial ◽  
Wisteria Sinensis ◽  
First Time ◽  
Wisteria Vein Mosaic Virus

The ornamental Chinese wisteria (Wisteria sinensis) is a woody perennial grown for its flowering habit in home gardens and landscape settings. In this brief, the occurrence of Wisteria vein mosaic virus (WVMV) was reported for the first time in Chinese wisteria in the United States of America. Accepted for publication 18 June 2008. Published 18 August 2008.

Expansion of Groundnut ringspot virus Host and Geographic Ranges in Solanaceous Vegetables in Peninsular Florida

2011 ◽  
Vol 12 (1) ◽  
pp. 34 ◽  
Author(s):  
Craig G. Webster ◽  
William W. Turechek ◽  
H. Charles Mellinger ◽  
Galen Frantz ◽  
Nancy Roe ◽  
...  
Keyword(s):  
United States ◽  
The United States ◽  
Vegetable Production ◽  
Viral Pathogen ◽  
Geographic Ranges ◽  
First Report ◽  
Geographic Spread ◽  
Wide Range ◽  
Production Areas ◽  
Solanaceous Plants

To the best of our knowledge, this is the first report of GRSV infecting tomatillo and eggplant, and it is the first report of GRSV infecting pepper in the United States. This first identification of GRSV-infected crop plants in commercial fields in Palm Beach and Manatee Counties demonstrates the continuing geographic spread of the virus into additional vegetable production areas of Florida. This information indicates that a wide range of solanaceous plants is likely to be infected by this emerging viral pathogen in Florida and beyond. Accepted for publication 27 June 2011. Published 25 July 2011.

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