scholarly journals Viral mutation rates: modelling the roles of within-host viral dynamics and the trade-off between replication fidelity and speed

2013 ◽  
Vol 280 (1750) ◽  
pp. 20122047 ◽  
Author(s):  
Roland R. Regoes ◽  
Steven Hamblin ◽  
Mark M. Tanaka
Keyword(s):  
Life History ◽  
Mutation Rate ◽  
High Rate ◽  
Mutation Rates ◽  
Viral Dynamics ◽  
Trade Off ◽  
Trade Offs ◽  
Very High ◽  
Host Death

Many viruses, particularly RNA viruses, mutate at a very high rate per genome per replication. One possible explanation is that high mutation rates are selected to meet the challenge of fluctuating environments, including the host immune response. Alternatively, recent studies argue that viruses evolve under a trade-off between replication speed and fidelity such that fast replication is selected, and, along with it, high mutation rates. Here, in addition to these factors, we consider the role of viral life-history properties: namely, the within-host dynamics of viruses resulting from their interaction with the host. We develop mathematical models incorporating factors occurring within and between hosts, including deleterious and advantageous mutations, host death owing to virulence and clearance of viruses by the host. Beneficial mutations confer both a within-host and a transmission advantage. First, we find that advantageous mutations have only a weak effect on the optimal genomic mutation rate. Second, viral life-history properties have a large effect on the mutation rate. Third, when the speed–fidelity trade-off is included, there can be two locally optimal mutation rates. Our analysis provides a way to consider how life-history properties combine with biochemical trade-offs to shape mutation rates.

scholarly journals A CASE OF HIGH RATE OF SPONTANEOUS MUTATION AFFECTING VIABILITY IN DROSOPHILA MELANOGASTER

Genetics ◽  
1973 ◽  
Vol 75 (1) ◽  
pp. 133-153
Author(s):  
Margaret Gale Kidwell ◽  
J F Kidwell ◽  
M Nei
Keyword(s):  
Mutation Rate ◽  
Spontaneous Mutation ◽  
High Rate ◽  
Mutation Rates ◽  
Genetic Constitution ◽  
Isogenic Line ◽  
Frequency Distributions ◽  
The Third ◽  
Lethal Mutations ◽  
Very High

ABSTRACT A spontaneous lethal mutation rate approximately twenty to thirty times greater than normal has been discovered in second and third chromosomes derived from an irradiated isogenic line and paired with marked inversion chromosomes. Mutations resulting in reductions of viability of varying magnitude short of complete lethality apparently also occur at a very high rate in the third but not in the second chromosome. The pattern of accumulation of lethal mutations over several generations and viability frequency distributions within generations have been studied in a number of independent experiments. High mutation rate occurs in heterozygous isogenic-derived second and third chromosomes, either together or apart, irrespective of the genetic constitution of nonhomologous chromosomes. High mutation rates were not observed using the same methods with chromosomes of an inbred line from a different source. The possible mechanisms responsible for these results are discussed.

scholarly journals Temperature effects on life-history trade-offs, germline maintenance and mutation rate under simulated climate warming

2017 ◽  
Vol 284 (1866) ◽  
pp. 20171721 ◽  
Author(s):  
David Berger ◽  
Josefine Stångberg ◽  
Karl Grieshop ◽  
Ivain Martinossi-Allibert ◽  
Göran Arnqvist
Keyword(s):  
Life History ◽  
Mutation Rate ◽  
Climate Warming ◽  
Cost Of Reproduction ◽  
Mutation Rates ◽  
Induced Mutations ◽  
Evolutionary Processes ◽  
Trade Offs ◽  
Simulated Climate ◽  
Multicellular Organisms

Mutation has a fundamental influence over evolutionary processes, but how evolutionary processes shape mutation rate remains less clear. In asexual unicellular organism, increased mutation rates have been observed in stressful environments and the reigning paradigm ascribes this increase to selection for evolvability. However, this explanation does not apply in sexually reproducing species, where little is known about how the environment affects mutation rate. Here we challenged experimental lines of seed beetle, evolved at ancestral temperature or under simulated climate warming, to repair induced mutations at ancestral and stressful temperature. Results show that temperature stress causes individuals to pass on a greater mutation load to their grand-offspring. This suggests that stress-induced mutation rates, in unicellular and multicellular organisms alike, can result from compromised germline DNA repair in low condition individuals. Moreover, lines adapted to simulated climate warming had evolved increased longevity at the cost of reproduction, and this allocation decision improved germline repair. These results suggest that mutation rates can be modulated by resource allocation trade-offs encompassing life-history traits and the germline and have important implications for rates of adaptation and extinction as well as our understanding of genetic diversity in multicellular organisms.

scholarly journals Balancing selection via life-history trade-offs maintains an inversion polymorphism in a seaweed fly

2019 ◽  
Author(s):  
Claire Mérot ◽  
Violaine Llaurens ◽  
Eric Normandeau ◽  
Louis Bernatchez ◽  
Maren Wellenreuther
Keyword(s):  
Life History ◽  
Balancing Selection ◽  
Natural Populations ◽  
Inversion Polymorphism ◽  
Antagonistic Pleiotropy ◽  
Trade Off ◽  
Trade Offs ◽  
Survival And Reproduction ◽  
Coelopa Frigida

AbstractHow genetic diversity is maintained in natural populations is an evolutionary puzzle. Over time, genetic variation within species can be eroded by drift and directional selection, leading to the fixation or elimination of alleles. However, some loci show persistent variants at intermediate frequencies for long evolutionary time-scales, implicating a role of balancing selection, but studies are seldom set up to uncover the underlying processes. Here, we identify and quantify the selective pressures involved in the widespread maintenance of an inversion polymorphism in the seaweed fly Coelopa frigida, using an experimental evolution approach to estimate fitness associated with different allelic combinations. By precisely evaluating reproductive success and survival rates separately, we show that the maintenance of the polymorphism is governed by a life-history trade-off, whereby each inverted haplotype has opposed pleiotropic effects on survival and reproduction. Using numerical simulations, we confirm that this uncovered antagonism between natural and sexual selection can maintain inversion variation in natural populations of C. frigida. Moreover, our experimental data highlights that inversion-associated fitness is affected differently by sex, dominance and environmental heterogeneity. The interaction between these factors promotes polymorphism maintenance through antagonistic pleiotropy. Taken together, our findings indicate that combinations of natural and sexual selective mechanisms enable the persistence of diverse trait in nature. The joint dynamics of life history trade-offs and antagonistic pleiotropy documented here is likely to apply to other species where large phenotypic variation is controlled by structural variants.Significance statementPersistence of chromosomal rearrangements is widespread in nature and often associated with divergent life-history traits. Understanding how contrasted life-history strategies are maintained in wild populations has implications for food production, health and biodiversity in a changing environment. Using the seaweed fly Coelopa frigida, we show that a polymorphic chromosomal inversion is maintained by a trade-off between survival and reproduction, and thus provide empirical support for a role of balancing selection via antagonistic pleiotropy. This mechanism has long been overlooked because it was thought to only apply to a narrow range of ecological scenarios. These findings empirically reinforce the recent theoretical predictions that co-interacting factors (dominance, environment and sex) can lead to polymorphism maintenance by antagonistic pleiotropy and favour life-history variation.

The intrinsic mechanism of life history trade-offs: The mediating role of control striving

2017 ◽  
Vol 49 (6) ◽  
pp. 783 ◽  
Author(s):  
Yan WANG ◽  
Zhenchao LIN ◽  
Bowen HOU ◽  
Shijin SUN
Keyword(s):  
Life History ◽  
Mediating Role ◽  
Trade Offs ◽  
Intrinsic Mechanism ◽  
Control Striving

Hormones and Behavior

2019 ◽  
pp. 11-26
Author(s):  
Maren N. Vitousek ◽  
Laura A. Schoenle
Keyword(s):  
Life History ◽  
Life Histories ◽  
Life History Traits ◽  
Developmental Plasticity ◽  
Endocrine System ◽  
Phenotypic Traits ◽  
Social Environments ◽  
Trade Offs ◽  
And Behavior

Hormones mediate the expression of life history traits—phenotypic traits that contribute to lifetime fitness (i.e., reproductive timing, growth rate, number and size of offspring). The endocrine system shapes phenotype by organizing tissues during developmental periods and by activating changes in behavior, physiology, and morphology in response to varying physical and social environments. Because hormones can simultaneously regulate many traits (hormonal pleiotropy), they are important mediators of life history trade-offs among growth, reproduction, and survival. This chapter reviews the role of hormones in shaping life histories with an emphasis on developmental plasticity and reversible flexibility in endocrine and life history traits. It also discusses the advantages of studying hormone–behavior interactions from an evolutionary perspective. Recent research in evolutionary endocrinology has provided insight into the heritability of endocrine traits, how selection on hormone systems may influence the evolution of life histories, and the role of hormonal pleiotropy in driving or constraining evolution.

scholarly journals Enzymatic antioxidants but not baseline glucocorticoids mediate the reproduction–survival trade-off in a wild bird

2018 ◽  
Vol 285 (1892) ◽  
pp. 20182141 ◽  
Author(s):  
Stefania Casagrande ◽  
Michaela Hau
Keyword(s):  
Life History ◽  
Body Condition ◽  
Redox State ◽  
Reproductive Investment ◽  
Redox System ◽  
Reactive Oxygen Metabolites ◽  
Enzymatic Antioxidants ◽  
Trade Off ◽  
Trade Offs ◽  
Nest Provisioning

The trade-off between reproductive investment and survival is central to life-history theory, but the relative importance and the complex interactions among the physiological mechanisms mediating it are still debated. Here we experimentally tested whether baseline glucocorticoid hormones, the redox system or their interaction mediate reproductive investment–survival trade-offs in wild great tits ( Parus major ). We increased the workload of parental males by clipping three feathers on each wing, and 5 days later determined effects on baseline corticosterone concentrations (Cort), redox state (reactive oxygen metabolites, protein carbonyls, glutathione peroxidase [GPx], total non-enzymatic antioxidants), body mass, body condition, reproductive success and survival. Feather-clipping did not affect fledgling numbers, chick body condition, nest provisioning rates or survival compared with controls. However, feather-clipped males lost mass and increased both Cort and GPx concentrations. Within feather-clipped individuals, GPx increases were positively associated with reproductive investment (i.e. male nest provisioning). Furthermore, within all individuals, males that increased GPx suffered reduced survival rates. Baseline Cort increases were related to mass loss but not to redox state, nest provisioning or male survival. Our findings provide experimental evidence that changes in the redox system are associated with the trade-off between reproductive investment and survival, while baseline Cort may support this trade-off indirectly through a link with body condition. These results also emphasize that plastic changes in individuals, rather than static levels of physiological signals, may mediate life-history trade-offs.

scholarly journals Life-history trade-offs and limitations associated with phenotypic adaptation under future ocean warming and elevated salinity

2019 ◽  
Vol 374 (1768) ◽  
pp. 20180428 ◽  
Author(s):  
Michael D. Jarrold ◽  
Leela J. Chakravarti ◽  
Emma M. Gibbin ◽  
Felix Christen ◽  
Gloria Massamba-N'Siala ◽  
...  
Keyword(s):  
Life History ◽  
Elevated Temperature ◽  
Egg Mass ◽  
Physiological Mechanisms ◽  
Trade Offs ◽  
Elevated Salinity ◽  
Metabolism Enzymes ◽  
Marine Polychaete ◽  
Ocean Conditions

Little is known about the life-history trade-offs and limitations, and the physiological mechanisms that are associated with phenotypic adaptation to future ocean conditions. To address this knowledge gap, we investigated the within- and trans-generation life-history responses and aerobic capacity of a marine polychaete, Ophryotrocha labronica, to elevated temperature and elevated temperature combined with elevated salinity for its entire lifespan. In addition, transplants between treatments were carried out at both the egg mass and juvenile stage to identify the potential influence of developmental effects. Within-generation, life-history trade-offs caused by the timing of transplant were only detected under elevated temperature combined with elevated salinity conditions. Polychaetes transplanted at the egg mass stage grew slower and had lower activities of energy metabolism enzymes but reached a larger maximum body size and lived longer when compared with those transplanted as juveniles. Trans-generation exposure to both elevated temperature and elevated temperature and salinity conditions restored 20 and 21% of lifespan fecundity, respectively. Trans-generation exposure to elevated temperature conditions also resulted in a trade-off between juvenile growth rates and lifespan fecundity, with slower growers showing greater fecundity. Overall, our results suggest that future ocean conditions may select for slower growers. Furthermore, our results indicate that life-history trade-offs and limitations will be more prevalent with the shift of multiple global change drivers, and thus there will be greater constraints on adaptive potential. This article is part of the theme issue ‘The role of plasticity in phenotypic adaptation to rapid environmental change’.

scholarly journals Life-history trade-offs in a generalist digenean from cetaceans: the role of host specificity and environmental factors

2015 ◽  
Vol 8 (1) ◽  
Author(s):  
Natalia Fraija-Fernández ◽  
Mercedes Fernández ◽  
Juan A. Raga ◽  
Francisco J. Aznar
Keyword(s):  
Life History ◽  
Environmental Factors ◽  
Host Specificity ◽  
Trade Offs

Are speed/accuracy trade-offs caused by neuromotor noise, or not?

1997 ◽  
Vol 20 (2) ◽  
pp. 306-307 ◽  
Author(s):  
Willem P. De Jong ◽  
Gerard P. Van Galen
Keyword(s):  
Kinematic Model ◽  
Psychological Processes ◽  
Trade Off ◽  
Kinematic Theory ◽  
Trade Offs ◽  
Biomechanical Constraints ◽  
Speed Accuracy ◽  
Existing Data ◽  
The Way

Notwithstanding its overwhelming descriptive power for existing data, it is not clear whether the kinematic theory of Plamondon & Alimi could generate new insights into biomechanical constraints and psychological processes underlying the way organisms trade off speed for accuracy. The kinematic model should elaborate on the role of neuromotor noise and on biomechanical strategies for reducing endpoint variability related to such noise.

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