scholarly journals Protein resonance assignment by solid-state NMR based on 1H-detected 13C-based double-quantum spectroscopy at fast MAS

2021 ◽  
Author(s):  
Alons Lends ◽  
Melanie Berbon ◽  
Birgit Habenstein ◽  
Yusuke Nishiyama ◽  
Antoine Loquet

Solid-state NMR spectroscopy is a powerful technique to study insoluble and non-crystalline proteins and protein complexes at atomic resolution. The development of proton (1H) detection at fast magic-angle spinning (MAS) has considerably increased the analytical capabilities of the technique, enabling the acquisition of 1H-detected fingerprint experiments in few hours. Here an approach based on double-quantum (DQ) 13C spectroscopy, detected on 1H, is introduced at fast MAS (70 kHz) to perform the sequential assignment of insoluble proteins of small size, without any specific deuteration requirement. By combining two three-dimensional 1H detected experiments correlating a 13C DQ dimension respectively to its intra-residue and sequential 15N-1H pairs, a sequential walk through DQ (CA+CO) resonance is obtained. Our approach takes advantage of fast MAS to achieve an efficient sensitivity and the addition of a DQ dimension provides spectral features useful for the resonance assignment process.

2007 ◽  
Vol 1008 ◽  
Author(s):  
Christian Bonhomme ◽  
Geoffrey Hartmeyer ◽  
Florence Babonneau ◽  
Michel Wong Chi Man ◽  
Guilhem Arrachart ◽  
...  

AbstractMaterials based on ureidopyrimidinone (UPY) dimers and Adenine (A) / Thymine (T) derivatives were synthesized and characterized by advanced solid state NMR (Nuclear Magnetic Resonance) techniques. Silylated UPY molecules were used as model compounds, leading to structured organic-inorganic materials after hydrolysis and condensation processes (sol-gel reactions). High resolution 1H solid state NMR has been extensively used for the in-depth description of the H-bond networks, including very fast MAS (Magic Angle Spinning) experiments at very high field and DQ (double quantum) recoupling experiments. The chemical nature of the organic-inorganic interface has been illuminated by such techniques. In, particular, it has been demonstrated that H-bond networks were preserved during sol-gel reactions and were comparable to those observed in the UPY crystalline precursors.


2017 ◽  
Vol 73 (3) ◽  
pp. 219-228 ◽  
Author(s):  
Tetsuo Oikawa ◽  
Manabu Okumura ◽  
Tsunehisa Kimura ◽  
Yusuke Nishiyama

A combination of solid-state NMR (ssNMR) and electron diffraction (ED) has been used to determine the crystalline polymorphs in small-organic microcrystalline molecules. Although 13C cross-polarization magic angle spinning (CPMAS) is a widely used method for determining crystalline polymorphs, even in a mixture, it sometimes fails if the molecular conformations are similar. On the other hand, ED can, in principle, differentiate crystalline forms with different lattice parameters, even when they have very similar molecular conformations. However, its application is usually limited to inorganic molecules only. This is because the ED measurements of organic molecules are very challenging due to degradation of the sample by electron irradiation. We overcame these difficulties by the use of 1H double-quantum/single-quantum correlation experiments at very fast magic angle spinning, together with ED observations under mild electron irradiation. The experiments were demonstrated on L-histidine samples in L-histidine·HCl·H2O, orthorhombic L-histidine and monoclinic L-histidine.


Biochemistry ◽  
2011 ◽  
Vol 50 (6) ◽  
pp. 989-1000 ◽  
Author(s):  
Marilú Dick-Pérez ◽  
Yuan Zhang ◽  
Jennifer Hayes ◽  
Andre Salazar ◽  
Olga A. Zabotina ◽  
...  

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