scholarly journals The pace of modern life, revisited

2021 ◽  
Author(s):  
Sarah Sanderson ◽  
Marc-Olivier Beausoleil ◽  
Rose E. O'dea ◽  
Zachary T. Wood ◽  
Cristian Correa ◽  
...  
Keyword(s):  
Environmental Changes ◽  
Natural Populations ◽  
Species Traits ◽  
Evolutionary Change ◽  
Absolute Difference ◽  
Phenotypic Change ◽  
Wild Populations ◽  
Human Disturbances ◽  
Phenotypic Changes ◽  
Rates Of Change

Wild populations must continuously adapt to environmental changes or they risk extinction. Such adaptations can be measured as phenotypic rates of change and can allow us to predict patterns of contemporary evolutionary change. About two decades ago, a dataset of phenotypic rates of change in wild populations was compiled. Since then, researchers have used (and expanded) this dataset to look at microevolutionary processes in relation to specific types of human disturbances. Here, we have updated the dataset adding 5257 estimates of phenotypic changes and used it to revisit established patterns of contemporary evolutionary change. Using this newer version, containing 6920 estimates of phenotypic changes, we revisit the conclusions of four published articles. We then synthesize the expanded dataset to compare rates of change across different types of human disturbance. Analyses of this expanded dataset suggests that: 1) a small absolute difference in rates of change exists between human disturbed and natural populations, 2) harvesting by humans results in larger rates of change than other types of disturbances, 3) introduced populations have increased rates of change, and 4) body size does not increase through time. Overall, findings from earlier analyses have largely held-up in analyses of our new dataset that encompass a much larger breadth of species, traits, and human disturbances. Lastly, we found that types of human disturbances affect rates of phenotypic change and we call for this database to serve as a stepping stone for further analyses to understand patterns of contemporary evolution.

Contemporary Evolution

2020 ◽  
Author(s):  
Andrew P. Hendry ◽  
Michael T. Kinnison
Keyword(s):  
Conservation Biology ◽  
Sustainability Science ◽  
Environmental Changes ◽  
Ecological Speciation ◽  
Contemporary Evolution ◽  
Wild Populations ◽  
Ecological Processes ◽  
Phenotypic Changes ◽  
Evolutionary Rescue ◽  
Genomic Basis

The term “contemporary evolution” is typically used in reference to ongoing or recent genetically based (heritable) phenotypic changes taking place in wild populations. In some cases, the genetic and genomic basis for these phenotypic changes can be identified and documented. Contemporary evolution is most apparent when organisms experience dramatic environmental changes, especially due to human causes such as commercial fisheries, climate change, pollution, or urbanization. Contemporary evolution then influences a number of evolutionary and ecological processes, such as ecological speciation, population dynamics (including evolutionary rescue), community structure, and ecosystem function. As a result, contemporary evolution has important applications in conservation biology, environmental sciences, and sustainability science.

scholarly journals Human influences on the strength of phenotypic selection

2018 ◽  
Vol 115 (40) ◽  
pp. 10070-10075 ◽  
Author(s):  
Vincent Fugère ◽  
Andrew P. Hendry
Keyword(s):  
Meta Analysis ◽  
Natural Populations ◽  
Phenotypic Selection ◽  
Phenotypic Change ◽  
Human Disturbances ◽  
Evolutionary Force ◽  
Selection For ◽  
And Control ◽  
Paired Design ◽  
Opportunity For Selection

Human activities are driving rapid phenotypic change in many species, with harvesting considered to be a particularly potent evolutionary force. We hypothesized that faster evolutionary change in human-disturbed populations could be caused by a strengthening of phenotypic selection, for example, if human disturbances trigger maladaptation and/or increase the opportunity for selection. We tested this hypothesis by synthesizing 1,366 phenotypic selection coefficients from 37 species exposed to various anthropogenic disturbances, including harvest. We used a paired design that only included studies measuring selection on the same traits in both human-disturbed and control (not obviously human-disturbed “natural”) populations. Surprisingly, this meta-analysis did not reveal stronger selection in human-disturbed environments; in fact, we even found some evidence that human disturbances might slightly reduce selection strength. The only clear exceptions were two fisheries showing very strong harvest selection. On closer inspection, we discovered that many disturbances weakened selection by increasing absolute fitness and by decreasing the opportunity for selection—thus explaining what initially seemed a counterintuitive result. We discuss how human disturbances can sometimes weaken rather than strengthen selection, and why measuring the total effect of disturbances on selection is exceedingly difficult. Despite these challenges, documenting human influences on selection can reveal disturbances with particularly strong effects (e.g., fishing), and thus better inform the management of populations exposed to these disturbances.

scholarly journals The relationship of Wolbachia infection and different phenotypes in the Drosophila melanogaster natural populations from radioactively polluted and clear areas in Ukraine

2019 ◽  
Vol 16 (2) ◽  
pp. 227-234 ◽  
Author(s):  
N. V. Gora ◽  
S. V. Serga ◽  
O. M. Maistrenko ◽  
O. V. Protsenko ◽  
I. A. Kozeretska
Keyword(s):  
Drosophila Melanogaster ◽  
Natural Populations ◽  
Wolbachia Infection ◽  
Phenotypic Change ◽  
Incomplete Penetrance ◽  
Isofemale Lines ◽  
Exclusion Zone ◽  
Phenotypic Changes ◽  
The Relationship ◽  
Cross Vein

Aim. The study was performed to investigate the relationship between Wolbachia infection and phenotypes that distinct from wild-type of Drosophila melanogaster from different localities in Ukraine including those from Chornobyl Exclusion Zone during 2013–2014. Methods. We have established isofemale lines from populations: Uman’, Inkerman, Odesa, Varva, Kyiv, Drogobych, Yaniv, Poliske, Chornobyl, and Chornobyl Nuclear Power Plant (NPP). The ambient radiation (µSv/h) was measured in the sample sites. The flies were reared in the laboratory through two generations. We carried out the observation of F2 flies for visibly detectable phenotypes. According to whether the trait was inherited, observations were separated into three categories: with deviations of posterior cross-vein (C2) (incomplete penetrance), visible phenotypic changes (non-inherited) and mutations (inherited). Polymerase chain reaction (PCR) with primers specific to the 16S rRNA and Wolbachia surface protein (wsp) genes were used to determine infection presence in isofemale lines of the flies established for each population. Results. Examination of different phenotypes indicates that the highest mutation rate (but not C2 and not inherited changes) is in populations from Chornobyl Exclusion Zone and, therefore, connection with ambient radiation was detected (p = 0.0241). Generalized mixed linear regression has shown evidence that the presence of phenotypes with defects of C2 vein varies with endosymbiont infection presence (p = 0.03473) in the populations from radioactively polluted areas. Conclusion. Wolbachia is not related to occurring phenotypes neither with phenotypic changes nor with mutations, at least in surveyed populations. However, C2 defected phenotypes relates to the bacterial presence in populations from the contaminated area. Nonetheless, the origin of this relationship is unknown and the mechanisms of such a connection require further research. Keywords: Drosophila melanogaster, Wolbachia, endosymbiont, ambient radiation, mutation, phenotypic change, posterior cross-vein.

Sedimentological and Biological Changes Associated with the Construction of the Oil Terminal of Antifer, France

1984 ◽  
Vol 16 (3-4) ◽  
pp. 399-406
Author(s):  
Y Monbet
Keyword(s):  
Grain Size ◽  
Environmental Changes ◽  
Biological Effects ◽  
Standing Stock ◽  
Natural Populations ◽  
Benthic Fauna ◽  
Field Investigations ◽  
Mean Grain Size ◽  
To Receive ◽  
Principal Species

A study was conducted to gain insight on actual sedimentological and biological effects associated with the construction of an oil Terminal designed to receive 500 000 d.w.t. tankers. Field investigations and subsequent laboratory analyses were organized to evaluate the nature and magnitude of environmental changes on benthic macrofauna, three years after the end of the construction. Sediments were found to decrease dramatically in medium grain size in area sheltered by the newly built breakwater. Increase of percentage of silt and clays (90 % against 20 %) was observed leeward of the jetty. The benthic fauna showed significant modifications. Although the same community (Pectinaria kareni Abra alba) recolonized the bottom after the dredging of up to 30 × 106 m3 of sediments, increase in abundance occured. Biomass remained at a constant level and decrease of diversity was observed. Considering the rate of siltation, and assuming a constant siltation rate equal to the rate observed from 1975 to 1978, a simple regressive model relating biomass to mean grain size of sediments has been developped. This model allowed the prediction of biomass and production of the two principal species for the period 1978 – 1981. Continuous siltation within the harbor leads to a maximum of biomass from years after the end of the construction, followed by a decrease of standing stock. This process may be explained by the respective tolerance of the two principal species to increase silt contant and also probably by the accumulation of organic matter which may impede the development of natural populations.

scholarly journals Genetic analysis of medfly populations in an area of sterile insect technique applications

2021 ◽  
Author(s):  
Rubén Sancho ◽  
Ana Guillem-Amat ◽  
Elena López-Errasquín ◽  
Lucas Sánchez ◽  
Félix Ortego ◽  
...  
Keyword(s):  
Genetic Markers ◽  
Sterile Insect Technique ◽  
Ceratitis Capitata ◽  
Natural Populations ◽  
Low Frequency ◽  
Fruit Fly ◽  
Wild Populations ◽  
Genetic Sexing ◽  
Environmental Implications ◽  
Genetic Sexing Strains

AbstractThe sterile insect technique (SIT) is widely used in integrated pest management programs for the control of the Mediterranean fruit fly (medfly), Ceratitis capitata. The genetic interactions between the released individuals from the genetic sexing strains (GSS), used for SIT applications worldwide, and wild individuals have not been studied. Under the hypothesis that a number of Vienna GSS individuals released to the field might not be completely sterile and may produce viable offspring, we have analyzed medfly Spanish field populations to evaluate the presence of Vienna strain genetic markers. To this goal, we have used contrasted nuclear and mitochondrial genetic markers, and two novel sets of nuclear polymorphisms with the potential to be markers to discriminate between Vienna and wild individuals. Nuclear Vienna markers located on the 5th chromosome of Vienna males have been found in 2.2% (19 from 875) of the Spanish wild medfly females captured at the area where SIT is applied. In addition, a female-inherited mitochondrial Vienna marker has been found in two from the 19 females showing nuclear Vienna markers. The detection of several of these markers in single individuals represents evidence of the introgression of Vienna strain into natural populations. However, alternative explanations as their presence at low frequency in wild populations in the studied areas cannot be fully discarded. The undesired release of non-fully sterile irradiated GSS individuals into the field and their interactions with wild flies, and the potential environmental implications should be taken into account in the application of the SIT.

scholarly journals Heritability of DNA methylation in threespine stickleback (Gasterosteus aculeatus)

Genetics ◽  
2021 ◽  
Vol 217 (1) ◽  
Author(s):  
Juntao Hu ◽  
Sara J S Wuitchik ◽  
Tegan N Barry ◽  
Heather A Jamniczky ◽  
Sean M Rogers ◽  
...  
Keyword(s):  
Dna Methylation ◽  
Genetic Architecture ◽  
Gasterosteus Aculeatus ◽  
Additive Genetic Variance ◽  
Natural Populations ◽  
Threespine Stickleback ◽  
Phenotypic Change ◽  
Cpg Sites ◽  
Cis And Trans ◽  
Methylation Variation

Abstract Epigenetic mechanisms underlying phenotypic change are hypothesized to contribute to population persistence and adaptation in the face of environmental change. To date, few studies have explored the heritability of intergenerationally stable methylation levels in natural populations, and little is known about the relative contribution of cis- and trans-regulatory changes to methylation variation. Here, we explore the heritability of DNA methylation, and conduct methylation quantitative trait loci (meQTLs) analysis to investigate the genetic architecture underlying methylation variation between marine and freshwater ecotypes of threespine stickleback (Gasterosteus aculeatus). We quantitatively measured genome-wide DNA methylation in fin tissue using reduced representation bisulfite sequencing of F1 and F2 crosses, and their marine and freshwater source populations. We identified cytosines (CpG sites) that exhibited stable methylation levels across generations. We found that additive genetic variance explained an average of 24–35% of the methylation variance, with a number of CpG sites possibly autonomous from genetic control. We also detected both cis- and trans-meQTLs, with only trans-meQTLs overlapping with previously identified genomic regions of high differentiation between marine and freshwater ecotypes. Finally, we identified the genetic architecture underlying two key CpG sites that were differentially methylated between ecotypes. These findings demonstrate a potential role for DNA methylation in facilitating adaptation to divergent environments and improve our understanding of the heritable basis of population epigenomic variation.

scholarly journals Global urban signatures of phenotypic change in animal and plant populations

2017 ◽  
Vol 114 (34) ◽  
pp. 8951-8956 ◽  
Author(s):  
Marina Alberti ◽  
Cristian Correa ◽  
John M. Marzluff ◽  
Andrew P. Hendry ◽  
Eric P. Palkovacs ◽  
...  
Keyword(s):  
Urban Development ◽  
Biotic Interactions ◽  
Well Being ◽  
Ecosystem Functions ◽  
Phenotypic Change ◽  
Functional Roles ◽  
Phenotypic Changes ◽  
Evolutionary Changes ◽  
Multiple Regions ◽  
Anthropogenic Systems

Humans challenge the phenotypic, genetic, and cultural makeup of species by affecting the fitness landscapes on which they evolve. Recent studies show that cities might play a major role in contemporary evolution by accelerating phenotypic changes in wildlife, including animals, plants, fungi, and other organisms. Many studies of ecoevolutionary change have focused on anthropogenic drivers, but none of these studies has specifically examined the role that urbanization plays in ecoevolution or explicitly examined its mechanisms. This paper presents evidence on the mechanisms linking urban development patterns to rapid evolutionary changes for species that play important functional roles in communities and ecosystems. Through a metaanalysis of experimental and observational studies reporting more than 1,600 phenotypic changes in species across multiple regions, we ask whether we can discriminate an urban signature of phenotypic change beyond the established natural baselines and other anthropogenic signals. We then assess the relative impact of five types of urban disturbances including habitat modifications, biotic interactions, habitat heterogeneity, novel disturbances, and social interactions. Our study shows a clear urban signal; rates of phenotypic change are greater in urbanizing systems compared with natural and nonurban anthropogenic systems. By explicitly linking urban development to traits that affect ecosystem function, we can map potential ecoevolutionary implications of emerging patterns of urban agglomerations and uncover insights for maintaining key ecosystem functions upon which the sustainability of human well-being depends.

An ecological explanation for hyperallometric scaling of reproduction

2021 ◽  
Author(s):  
Tomos Potter ◽  
Anja Felmy
Keyword(s):  
Body Size ◽  
Reproductive Output ◽  
Resource Competition ◽  
Natural Populations ◽  
Scaling Exponent ◽  
Wild Populations ◽  
Wet Season ◽  
Size Dependent ◽  
In The Wild ◽  
The Relationship

AbstractIn wild populations, large individuals have disproportionately higher reproductive output than smaller individuals. We suggest an ecological explanation for this observation: asymmetry within populations in rates of resource assimilation, where greater assimilation causes both increased reproduction and body size. We assessed how the relationship between size and reproduction differs between wild and lab-reared Trinidadian guppies. We show that (i) reproduction increased disproportionately with body size in the wild but not in the lab, where effects of resource competition were eliminated; (ii) in the wild, the scaling exponent was greatest during the wet season, when resource competition is strongest; and (iii) detection of hyperallometric scaling of reproduction is inevitable if individual differences in assimilation are ignored. We propose that variation among individuals in assimilation – caused by size-dependent resource competition, niche expansion, and chance – can explain patterns of hyperallometric scaling of reproduction in natural populations.

scholarly journals Hazardous Drinking among Students over a Decade of University Policy Change: Controlled Before-and-After Evaluation

2018 ◽  
Vol 15 (10) ◽  
pp. 2137 ◽  
Author(s):  
Kypros Kypri ◽  
Brett Maclennan ◽  
Kimberly Cousins ◽  
Jennie Connor
Keyword(s):  
Environmental Changes ◽  
Population Policy ◽  
Code Of Conduct ◽  
Alcohol Policy ◽  
Absolute Difference ◽  
Effect Estimate ◽  
Policy Reforms ◽  
Student Body ◽  
University Policy ◽  
Before And After

Background: Responding to high levels of alcohol-related harm among students, a New Zealand university deployed a security and liaison service, strengthened the Student Code of Conduct, increased its input on the operation of alcohol outlets near campus, and banned alcohol advertising on campus. We estimated the change in the prevalence of alcohol consumption patterns among students at the university compared with other universities. Methods: We conducted a controlled before-and-after study with surveys in residential colleges at the target university in 2004 and 2014, and in random samples of students at the target university and three control universities in 2005 and 2013. The primary outcome was the prevalence of recent intoxication, while we analysed drinking per se and drinking in selected locations to investigate mechanisms of change. Results: The 7-day prevalence of intoxication decreased from 45% in 2004 to 33% in 2014 (absolute difference: 12%; 95% CI: 7% to 17%) among students living in residential colleges, and from 40% in 2005 to 26% in 2013 (absolute difference: 14%; 95% CI: 8% to 20%) in the wider student body of the intervention university. The intervention effect estimate, representing the change at the intervention university adjusted for change at other universities (aOR = 1.30; 95% CI: 0.89 to 1.90), was consistent with a benefit of intervention but was not statistically significant (p = 0.17). Conclusion: In this period of alcohol policy reform, drinking to intoxication decreased substantially in the targeted student population. Policy reforms and coincidental environmental changes may each have contributed to these reductions.

scholarly journals Environmental changes dictate selection and nonspecific epistasis in an empirical phenotype-environment-fitness landscape

2021 ◽  
Author(s):  
J.Z. Chen ◽  
D.M. Fowler ◽  
N. Tokuriki
Keyword(s):  
Selection Pressure ◽  
Evolutionary Dynamics ◽  
Environmental Changes ◽  
Fitness Landscape ◽  
Resistance Level ◽  
Phenotypic Changes ◽  
Environmental Selection ◽  
Selection Environment ◽  
Data Points ◽  
Environmental Dependence

SummaryThe fitness landscape, a function that maps genotypic and phenotypic changes to their effects on fitness, is an invaluable concept in evolutionary biochemistry. Though widely discussed, measurements of phenotype-fitness landscapes in proteins remain scarce. Here, we quantify all single mutational effects on fitness and phenotype (antibiotic resistance level) of VIM-2 β-lactamase (5600 variants) across a 64-fold range of ampicillin concentrations by deep mutational scanning. We then construct a phenotype-fitness landscape that takes variations in environmental selection pressure into account (a phenotype-environment-fitness landscape). We found that a simple, empirical landscape accurately models the ~39,000 mutational data points, which suggests the evolution of VIM-2 can be predicted based on the selection environment. Our landscape provides new quantitative knowledge on the evolution of the β-lactamases and proteins in general, particularly their evolutionary dynamics under sub-inhibitory antibiotic concentrations, as well as the mechanisms and environmental dependence of nonspecific epistasis.

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