scholarly journals High-Density Rat Radiation Hybrid Maps Containing Over 24,000 SSLPs, Genes, and ESTs Provide a Direct Link to the Rat Genome Sequence

2004 ◽  
Vol 14 (4) ◽  
pp. 750-757 ◽  
Author(s):  
A. E. Kwitek
Keyword(s):  
Genome Sequence ◽  
Radiation Hybrid ◽  
High Density ◽  
Direct Link ◽  
Rat Genome

Identification of the T2R Repertoire of Taste Receptor Genes in the Rat Genome Sequence

2003 ◽  
Vol 2 (4) ◽  
pp. 155-161 ◽  
Author(s):  
Caroline Conte ◽  
Martin Ebeling ◽  
Anne Marcuz ◽  
Pedro J. Andres-Barquin
Keyword(s):  
Genome Sequence ◽  
Taste Receptor ◽  
Rat Genome

scholarly journals High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea

2015 ◽  
Vol 5 (1) ◽  
Author(s):  
Rashmi Gaur ◽  
Ganga Jeena ◽  
Niraj Shah ◽  
Shefali Gupta ◽  
Seema Pradhan ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Linkage Mapping ◽  
High Density ◽  
Synteny Analysis

scholarly journals Significance testing and genomic inflation factor using high‐density genotypes or whole‐genome sequence data

2019 ◽  
Vol 136 (6) ◽  
pp. 418-429 ◽  
Author(s):  
Sanne den Berg ◽  
Jérémie Vandenplas ◽  
Fred A. Eeuwijk ◽  
Marcos S. Lopes ◽  
Roel F. Veerkamp
Keyword(s):  
Genome Sequence ◽  
Sequence Data ◽  
High Density ◽  
Whole Genome Sequence ◽  
Significance Testing ◽  
Whole Genome ◽  
Genome Sequence Data ◽  
Inflation Factor

A new online image analyzer for macrocontaminants in recycled pulps

TAPPI Journal ◽  
2012 ◽  
Vol 11 (2) ◽  
pp. 19-28 ◽  
Author(s):  
MICHELLE RICARD ◽  
GILLES DORRIS ◽  
SYLVAIN GENDRON ◽  
NATALIE PAGÉ ◽  
DENISE FILION ◽  
...  
Keyword(s):  
Image Analysis ◽  
Water Surface ◽  
High Density ◽  
Image Analyzer ◽  
Low Density ◽  
Direct Link ◽  
Online Mode ◽  
Recycled Pulp ◽  
Data Control

A new image analysis-based instrument has been developed for measurement of low density and high density macrocontaminants from recycled pulp or whitewater. The unit is coupled to a pulp classifier that isolates the contaminants from pulp and concentrates them before their transfer to a specialized chamber that further separates the contaminants based on their relative density to water. The low density contaminants float on the water surface, whereas the high density macrocontaminants sink onto the settling plate, where images of both contaminant types are then captured and analysed. Through image analysis, the high density contaminants are further classified into two categories: contaminants that are whitish in color and mainly comprised of stickies are named heavy stickies, whereas contaminants that are blackish in color and comprised of black toners and dark wood components are named dirt. When operating in the online mode with autosamplers delivering the samples to the pulp classifier, the instrument provides macrocontaminant determinations every 15 min. The total count and surface area of both types of macrocontaminants per kilograms of pulp can then be sent by direct link to the mill data control system, allowing an effective follow-up of macrocontaminant changes in process pulps and waters. The unit also allows the user to view images of the contaminants. The analyzer results obtained in terms of number and area of macrocontaminants show a linear relationship with TAPPI T-277 om-07 “Macro stickies content in pulp: the ‘pick-up’ method.”

A radiation hybrid map of the rat genome containing 5,255 markers

10.1038/8737 ◽  
1999 ◽  
Vol 22 (1) ◽  
pp. 27-36 ◽  
Author(s):  
Takeshi K. Watanabe ◽  
Marie-Therese Bihoreau ◽  
Linda C. McCarthy ◽  
Susanna L. Kiguwa ◽  
Haretsugu Hishigaki ◽  
...  
Keyword(s):  
Radiation Hybrid ◽  
Radiation Hybrid Map ◽  
Rat Genome

scholarly journals A framework radiation hybrid map of buffalo chromosome 1 ordering scaffolds from buffalo genome sequence assembly

2015 ◽  
Vol 14 (4) ◽  
pp. 13096-13104 ◽  
Author(s):  
N.B. Stafuzza ◽  
B.C.M. Naressi ◽  
E. Yang ◽  
J.J. Cai ◽  
M.E.J. Amaral-Trusty
Keyword(s):  
Genome Sequence ◽  
Radiation Hybrid ◽  
Sequence Assembly ◽  
Chromosome 1 ◽  
Genome Sequence Assembly ◽  
Radiation Hybrid Map

scholarly journals High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly

BMC Genomics ◽  
2012 ◽  
Vol 13 (1) ◽  
pp. 585 ◽  
Author(s):  
Bertrand Servin ◽  
Thomas Faraut ◽  
Nathalie Iannuccelli ◽  
Diana Zelenika ◽  
Denis Milan
Keyword(s):  
High Resolution ◽  
Genome Sequence ◽  
Radiation Hybrid ◽  
Sequence Assembly ◽  
Genome Sequence Assembly ◽  
Pig Genome

Design and Use of Oligonucleotide Microarrays for Identification of Biomining Microorganisms

2009 ◽  
Vol 71-73 ◽  
pp. 155-158 ◽  
Author(s):  
N. Ehrenfeld ◽  
Andres Aravena ◽  
A. Reyes-Jara ◽  
M. Barreto ◽  
R. Assar ◽  
...  
Keyword(s):  
Microarray Analysis ◽  
Genome Sequence ◽  
Environmental Samples ◽  
High Density ◽  
Oligonucleotide Microarrays ◽  
Analysis Software ◽  
Open Platform ◽  
Different Strains

Results from a high density microarray having 32,392 50-mer oligonucleotides, termed BMS2.1, were analyzed and used for the design of a new slide, called BMS 3.0, with 560 specific oligonucleotides manufactured in standard slides to be used in any open platform. Hybridizations of several samples, either known microorganisms or environmental samples, were performed. Automatic microarray analysis software was built in order to handle these data in a quick an efficient way. While oligonucleotides designed for microorganisms with known genome sequence showed a very good behavior, according to predicted design, variations were detected when different strains were hybridized, probably due to inadequate specificity of probes. Appropriate parameterization of the analysis software will improve prediction of presence for most of the microorganisms.

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