The crystal structure of thiamine hydrochloride (vitamin B)

1962 ◽  
Vol 15 (8) ◽  
pp. 747-757 ◽  
Author(s):  
J. Kraut ◽  
H. J. Reed
2014 ◽  
Vol 70 (4) ◽  
pp. 1166-1172 ◽  
Author(s):  
Michael E. Webb ◽  
Briony A. Yorke ◽  
Tom Kershaw ◽  
Sarah Lovelock ◽  
Carina M. C. Lobley ◽  
...  

Aspartate α-decarboxylase is a pyruvoyl-dependent decarboxylase required for the production of β-alanine in the bacterial pantothenate (vitamin B5) biosynthesis pathway. The pyruvoyl group is formedviathe intramolecular rearrangement of a serine residue to generate a backbone ester intermediate which is cleaved to generate an N-terminal pyruvoyl group. Site-directed mutagenesis of residues adjacent to the active site, including Tyr22, Thr57 and Tyr58, reveals that only mutation of Thr57 leads to changes in the degree of post-translational activation. The crystal structure of the site-directed mutant T57V is consistent with a non-rearranged backbone, supporting the hypothesis that Thr57 is required for the formation of the ester intermediate in activation.


1985 ◽  
Vol 68 (1) ◽  
pp. 83-85
Author(s):  
Ramesh T Sane ◽  
Vipul J Doshi ◽  
Swati Jukar ◽  
Sanjay K Joshi ◽  
Satish V Sawant ◽  
...  

Abstract A simple colorimetric method is described for the determination of thiamine hydrochloride (vitamin B,) in dosage forms. The method is based on measurement of a yellow complex formed when thiamine HC1 is treated with /7-methylaminophenol sulfate (Metol) under alkaline conditions. Compounds such as vitamins A, B2, B6, B,2, C, D, and E, and niacinamide, citric acid, liquid glucose, calcium pantothenate, biotin, liver extract, and folic acid do not interfere in the reaction. Extracting the complex into chloroform before quantitation enhances the stability of the reaction product and removes interference of watersoluble colored constituents in syrup samples. Statistical validation shows that the method is precise and accurate. Results agree well with those obtained by other methods in the literature


1979 ◽  
Vol 27 (11) ◽  
pp. 2751-2759 ◽  
Author(s):  
ATSUSHI WATANABE ◽  
SABURO TASAKI ◽  
YOSHIKAZU WADA ◽  
HIDEO NAKAMACHI

2014 ◽  
Vol 70 (12) ◽  
pp. 1584-1590 ◽  
Author(s):  
Michael C. Thompson ◽  
Christopher S. Crowley ◽  
Jeffrey Kopstein ◽  
Thomas A. Bobik ◽  
Todd O. Yeates

The EutL shell protein is a key component of the ethanolamine-utilization microcompartment, which serves to compartmentalize ethanolamine degradation in diverse bacteria. The apparent function of this shell protein is to facilitate the selective diffusion of large cofactor molecules between the cytoplasm and the lumen of the microcompartment. While EutL is implicated in molecular-transport phenomena, the details of its function, including the identity of its transport substrate, remain unknown. Here, the 2.1 Å resolution X-ray crystal structure of a EutL shell protein bound to cobalamin (vitamin B12) is presented and the potential relevance of the observed protein–ligand interaction is briefly discussed. This work represents the first structure of a bacterial microcompartment shell protein bound to a potentially relevant cofactor molecule.


A hexacarboxylic acid, obtained by the degradation of vitamin B 12 by Cannon, Johnson & Todd in 1953 has been examined by X-ray analytical methods. These lead to a solution of both the crystal and chemical structure of the acid. The crystals are orthorhombic, a = 24·58, b = 15·52, c = 13·32 Å, space group, P 2 1 2 1 2 1 , n = 4. The asymmetric unit is found to consist essentially of one molecule of hexacarboxylic acid, C 46 H 58 O 13 N 6 . CoCl, two molecules of water and one of acetone. The hexacarboxylic acid molecule has a central cobalt atom in approximately octahedral co-ordination attached to one cyanide group, one chlorine atom and four nitrogen atoms of the corrin nucleus. The nucleus itself is substituted by acetic and propionic acid groups, a lactam ring and a number of methyl groups. The position of the cobalt atom in the crystal structure was first found from Patterson projections and the remaining atomic positions then derived from a series of calculated approximations to the three-dimensional electron density distribution. For these calculations, phases were derived from structure factors calculated on gradually increasing numbers of selected atomic positions from the stage of ρ 1, where only the cobalt atom sites were known, to ρ 10 where 73 atoms, not counting hydrogen, had been placed. The process was not quite straightforward; particular difficulty was experienced in finding the positions of the atoms of one side-chain which may be affected by disorder. The parameters of the atoms have been refined by two cycles of least-squares calculations. A number of observations were made in the course of the analysis which bear on the further use of non-centrosymmetric Fourier syntheses in the study of complex structures. An appendix by A. Vos deals with intensity anomalies observed on the X-ray photographs of the hexacarboxylic acid which provide evidence of its absolute configuration. An appendix by K. N. Trueblood summarizes various aspects of the analysis of the hexacarboxylic acid, seen as a whole.


2017 ◽  
Vol 1148 ◽  
pp. 57-61
Author(s):  
Katsuyuki Aoki ◽  
Hideyuki Nakamura ◽  
Toshiaki Hattori ◽  
Ning-Hai Hu ◽  
Masayoshi Onishi

2019 ◽  
Vol 22 (2) ◽  
pp. E082-E087
Author(s):  
Ertan Demirdas ◽  
Kivanc Atilgan

Objective: In this study, we investigated whether the addition of vitamin B complex to prime solution for cardiopulmonary bypass (CPB) in cobalamin-deficient patients undergoing on-pump coronary artery bypass grafting (CABG) helps prevent the development of postoperative delirium (POD). Materials and Methods: In the present study, 69 of 138 patients with serum vitamin B12 levels <200 pg/mL based on the blood sample taken within 1 week prior to on-pump CABG between January 2013 and December 2017 were enrolled. The control group included 69 patients. Vitamin B complex (25 mg vitamin B1, thiamine hydrochloride, 2.734 mg vitamin B2, riboflavin phosphate ester monosodium, 5 mg vitamin B6, pyridoxine hydrochloride, 15 mcg vitamin B12, 50 mg niacinamide, and 17.2 mg D-panthenol) was added to the prime solution for CPB in the study group. The Intensive Care Delirium Screening Checklist (ICDSC) was used for the diagnosis of POD, and the severity of delirium was assessed by using the Delirium Rating Scale-Revised-98 (DRS-R-98). Results: Twenty-nine patients in the control group (42%) and 18 patients (26%) in the study group developed POD (P = .017), delirium severity scores were higher in the control group (16.5 ± 2.9 versus 15.03 ± 2.48, P = .034). Logistic regression analyses showed vitamin B complex was an independent protective factor for preventing the development of POD in patients undergoing on-pump CABG (odds ratio [OR]: 0.23, 95% confidence interval [95% CI]: 0.06-0.83, P = .025). Conclusion: On the basis of the results of our study, the addition of vitamin B complex to the prime solution for CPB decreases the incidence of POD in cobalamin-deficient patients undergoing on-pump CABG.


The crystal structure of vitamin B 12 -5' -phosphate, a biosynthetic precursor of vitamin B 12 , has been determined by X-ray diffraction methods. The air-dried crystals are orthorhombic, space group P 2 1 2 1 2 1 , with a = 23.72 Å, b = 21.74 Å and c = 16.07 Å. The observed density of 1.362 g cm -3 indicates four vitamin B 12 -5' -phosphate and about sixty water molecules in the unit cell. The X-ray diffraction data to 1.2 Å resolution were collected with a PAILRED linear diffractometer using Cu K α radiation from a silicon monochromator. The structure was solved by using Patterson methods in conjunction with the tangent formula and was refined by Fourier and least-squares methods. The final R value for the 2112 observed reflexions is 16.2 %. The structure is very similar to that found by Hodgkin and co-workers for air-dried vitamin B 12 crystals. The difference Fourier synthesis between this compound and vitamin B 12 shows that two water molecules move into phosphate oxygen positions when the phosphate in the precursor is removed, and one acetamide in contact with these water molecules in the vitamin is rotated out of the way in the phosphate. A second acetamide is also differently oriented in the two crystals. The α -glycosidic bond between the ribose and the dimethylbenzimidazole is 16° out of the plane of the base. The ribose conformation is C2'>- exo , and the phosphate ester conformations are similar to those found in other B 12 crystals.


Author(s):  
Mino R. Caira ◽  
G. Victor Fazakerley ◽  
Peter W. Linder ◽  
Luigi R. Nassimbeni

Measurements were made during 1948-9 of all the intensities of hkl reflexions observable with chromium Koc X-radiation from air-dried crystals of vitamin B 12 . Calculations parallel with those of J. G. White were carried out on these data. The positions of the cobalt atoms in the crystal structure were found from three-dimensional Patterson series and the positions of 90 atoms of the B 12 molecule and 7 water molecules were derived through three successive approximations to the three-dimensional electron density distribution. The choice of atomic positions was checked against superposition maps derived from the original Patterson series, and assisted by comparisons with other B 12 derivatives. Minor differences appear between the positions derived here and in III; some of these may be real differences due to the state of dryness of the crystals.


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