scholarly journals Teaching Edition of International Tables for Crystallography: Crystallographic symmetry. Edited by Mois I. Aroyo. IUCr/Wiley, 2021. Softcover, pp. xii + 236. ISBN 978-0-470-97422-3. Price GBP 29.99.

2021 ◽  
Vol 77 (5) ◽  
pp. 506-508
Author(s):  
Massimo Nespolo
Author(s):  
U. Dahmen ◽  
K.H. Westmacott

Despite the increased use of convergent beam diffraction, symmetry concepts in their more general form are not commonly applied as a practical tool in electron microscopy. Crystal symmetry provides an abundance of information that can be used to facilitate and improve the TEM analysis of crystalline solids. This paper draws attention to some aspects of symmetry that can be put to practical use in the analysis of structures and morphologies of two-phase materials.It has been shown that the symmetry of the matrix that relates different variants of a precipitate can be used to determine the axis of needle- or lath-shaped precipitates or the habit plane of plate-shaped precipitates. By tilting to a special high symmetry orientation of the matrix and by measuring angles between symmetry-related variants of the precipitate it is possible to find their habit from a single micrograph.


Metals ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 344
Author(s):  
Jian Feng ◽  
Stefan Barth ◽  
Marc Wettlaufer

Austenite grains that underwent the f.c.c. to b.c.c. (or b.c.t.) transformation are typically composed of 24 Kurdjumov–Sachs variants that can be categorized by three axes of Bain transformations; thus, a complete transformation generally displays 3-fold symmetry in (001) pole figures. In the present work, crystallographic symmetry in 42CrMo4 steel austempered below martensite start temperature was investigated with the help of the orientation distribution function (ODF) analysis based on the FEG-SEM/EBSD technique. It is shown that, upon phase transformations, the specimens contained 6-fold symmetry in all (001), (011), and (111) pole figures of an ODF. The ODF analysis, verified by theoretical modeling, showed that under plane-strain conditions cracks prefer to propagate through areas strongly offset by the high symmetry. The origin of high symmetry was investigated, and the mechanism of the symmetry breakdown was explained.


2016 ◽  
Vol 109 (16) ◽  
pp. 162403 ◽  
Author(s):  
A. E. Rogachev ◽  
P. M. Vetoshko ◽  
N. A. Gusev ◽  
M. A. Kozhaev ◽  
A. R. Prokopov ◽  
...  

1998 ◽  
Vol 54 (1) ◽  
pp. 81-85 ◽  
Author(s):  
F. M. D. Vellieux

A comparison has been made of two methods for electron-density map improvement by the introduction of atomicity, namely the iterative skeletonization procedure of the CCP4 program DM [Cowtan & Main (1993). Acta Cryst. D49, 148–157] and the pseudo-atom introduction followed by the refinement protocol in the program suite DEMON/ANGEL [Vellieux, Hunt, Roy & Read (1995). J. Appl. Cryst. 28, 347–351]. Tests carried out using the 3.0 Å resolution electron density resulting from iterative 12-fold non-crystallographic symmetry averaging and solvent flattening for the Pseudomonas aeruginosa ornithine transcarbamoylase [Villeret, Tricot, Stalon & Dideberg (1995). Proc. Natl Acad. Sci. USA, 92, 10762–10766] indicate that pseudo-atom introduction followed by refinement performs much better than iterative skeletonization: with the former method, a phase improvement of 15.3° is obtained with respect to the initial density modification phases. With iterative skeletonization a phase degradation of 0.4° is obtained. Consequently, the electron-density maps obtained using pseudo-atom phases or pseudo-atom phases combined with density-modification phases are much easier to interpret. These tests also show that for ornithine transcarbamoylase, where 12-fold non-crystallographic symmetry is present in the P1 crystals, G-function coupling leads to the simultaneous decrease of the conventional R factor and of the free R factor, a phenomenon which is not observed when non-crystallographic symmetry is absent from the crystal. The method is far less effective in such a case, and the results obtained suggest that the map sorting followed by refinement stage should be by-passed to obtain interpretable electron-density distributions.


Author(s):  
Olaf Delgado-Friedrichs ◽  
Stephen T. Hyde ◽  
Shin-Won Mun ◽  
Michael O'Keeffe ◽  
Davide M. Proserpio

Nets in which different vertices have identical barycentric coordinates (i.e.have collisions) are called unstable. Some such nets have automorphisms that do not correspond to crystallographic symmetries and are called non-crystallographic. Examples are given of nets taken from real crystal structures which have embeddings with crystallographic symmetry in which colliding nodes either are, or are not, topological neighbors (linked) and in which some links coincide. An example is also given of a crystallographic net of exceptional girth (16), which has collisions in barycentric coordinates but which also has embeddings without collisions with the same symmetry. In this last case the collisions are termedunforced.


1999 ◽  
Vol 32 (2) ◽  
pp. 365-368 ◽  
Author(s):  
Guoguang Lu

In order to facilitate applications of averaging techniques in the MIR/MAD procedure, a program,FINDNCS, which automatically identifies non-crystallographic symmetry (NCS) from heavy-atom sites, has been developed. The program outputs the NCS operations (a rotation matrix and a translation vector), the corresponding root-mean-square (r.m.s.) deviations of heavy-atom sites, polar angles and screw translations, and writes coordinates of matching sites in Protein Data Bank (PDB) format. The program has an interface with the graphics programO[Joneset al. (1991).Acta Cryst.A47, 110–119] so that the NCS operations can be displayed automatically. In the test examples, all the correct NCS operations were identified and were above the noise solutions.


Author(s):  
Carmelo Giacovazzo

In this chapter we summarize the basic concepts, formulas and tables which constitute the essence of general crystallography. In Sections 1.2 to 1.5 we recall, without examples, definitions for unit cells, lattices, crystals, space groups, diffraction conditions, etc. and their main properties: reading these may constitute a useful reminder and support for daily work. In Section 1.6 we establish and discuss the basic postulate of structural crystallography: this was never formulated, but during any practical phasing process it is simply assumed to be true by default. We will also consider the consequences of such a postulate and the caution necessary in its use. We recall the main concepts and definitions concerning crystals and crystallographic symmetry. Crystal. This is the periodic repetition of a motif (e.g. a collection of molecules, see Fig. 1.1). An equivalent mathematical definition is: the crystal is the convolution between a lattice and the unit cell content (for this definition see (1.4) below in this section). Unit cell. This is the parallelepiped containing the motif periodically repeated in the crystal. It is defined by the unit vectors a, b, c, or, by the six scalar parameters a, b, c, α, β, γ (see Fig. 1.1). The generic point into the unit cell is defined by the vector . . . r = x a + y b + z c, . . . where x, y, z are fractional coordinates (dimensionless and lying between 0 and 1). The volume of the unit cell is given by (see Fig. 1.2) . . . V = a ∧ b · c = b ∧ c · a = c ∧ a · b. (1.1). . .


Sign in / Sign up

Export Citation Format

Share Document