Semi-automatic three-dimensional vessel segmentation using a connected component localization of the Region-Scalable Fitting Energy

Author(s):  
Marco Fedele ◽  
Elena Faggiano ◽  
Luca Barbarotta ◽  
Francesco Cremonesi ◽  
Luca Formaggia ◽  
...  
2015 ◽  
Vol 24 (04) ◽  
pp. 1550018 ◽  
Author(s):  
Tatyana Ivanovska ◽  
René Laqua ◽  
Muhammad Laiq Shahid ◽  
Lars Linsen ◽  
Katrin Hegenscheid ◽  
...  

In our project, we analyse throat structures using magnetic resonance imaging (MRI) to associate anatomic risk factors with sleep related disorders. Pharynx segmentation is the first step in the three-dimensional analysis of throat tissues.We present a pipeline for automatic pharynx segmentation. The automatic part of the approach consists of three steps: smoothing, thresholding, 2D and 3D connected component analysis. Whereas two first steps are rather common, the third step provides a set of general rules for the automatic extraction of the pharyngeal component. Our method requires less than one minute to extract the pharyngeal structures. The approach is evaluated quantitatively on 30 data sets using region-based and edge-based measures.


2014 ◽  
Vol 59 (22) ◽  
pp. 7013-7029 ◽  
Author(s):  
Y Ding ◽  
W O C Ward ◽  
T Wästerlid ◽  
P A Gowland ◽  
A M Peters ◽  
...  

Author(s):  
Takashi Ohnishi ◽  
Alexei Teplov ◽  
Noboru Kawata ◽  
Kareem Ibrahim ◽  
Peter Ntiamoah ◽  
...  

2014 ◽  
Vol 43 (5) ◽  
pp. 1223-1234 ◽  
Author(s):  
Rahul Prasanna Kumar ◽  
Fritz Albregtsen ◽  
Martin Reimers ◽  
Bjørn Edwin ◽  
Thomas Langø ◽  
...  

2018 ◽  
Vol 2018 ◽  
pp. 1-18 ◽  
Author(s):  
Rui Zhang ◽  
Zhuhuang Zhou ◽  
Weiwei Wu ◽  
Chung-Chih Lin ◽  
Po-Hsiang Tsui ◽  
...  

In this paper, an improved fuzzy connectedness (FC) method was proposed for automatic three-dimensional (3D) liver vessel segmentation in computed tomography (CT) images. The vessel-enhanced image (i.e., vesselness image) was incorporated into the fuzzy affinity function of FC, rather than the intensity image used by traditional FC. An improved vesselness filter was proposed by incorporating adaptive sigmoid filtering and a background-suppressing item. The fuzzy scene of FC was automatically initialized by using the Otsu segmentation algorithm and one single seed generated adaptively, while traditional FC required multiple seeds. The improved FC method was evaluated on 40 cases of clinical CT volumetric images from the 3Dircadb (n=20) and Sliver07 (n=20) datasets. Experimental results showed that the proposed liver vessel segmentation strategy could achieve better segmentation performance than traditional FC, region growing, and threshold level set. Average accuracy, sensitivity, specificity, and Dice coefficient of the improved FC method were, respectively, (96.4 ± 1.1)%, (73.7 ± 7.6)%, (97.4 ± 1.3)%, and (67.3 ± 5.7)% for the 3Dircadb dataset and (96.8 ± 0.6)%, (89.1 ± 6.8)%, (97.6 ± 1.1)%, and (71.4 ± 7.6)% for the Sliver07 dataset. It was concluded that the improved FC may be used as a new method for automatic 3D segmentation of liver vessel from CT images.


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