scholarly journals Multisample aCGH Data Analysis via Total Variation and Spectral Regularization

2013 ◽  
Vol 10 (1) ◽  
pp. 230-235 ◽  
Author(s):  
Xiaowei Zhou ◽  
Can Yang ◽  
Xiang Wan ◽  
Hongyu Zhao ◽  
Weichuan Yu
Keyword(s):  
Data Analysis ◽  
Total Variation ◽  
Acgh Data ◽  
Spectral Regularization

scholarly journals Mat-aCGH: a Matlab toolbox for simultaneous multisample aCGH data analysis and visualization

2015 ◽  
Author(s):  
Majid Mohammadi ◽  
Hossein Sharifi Noghabi
Keyword(s):  
Data Analysis ◽  
Array Cgh ◽  
Comparative Genomic ◽  
Matlab Toolbox ◽  
Comparative Genomic Hybridization Array ◽  
Acgh Data ◽  
Information Theoretic ◽  
Acgh Analysis ◽  
Microarray Comparative Genomic Hybridization ◽  
Information Theoretic Methods

Mat-aCGH is an application toolbox for analysis and visualization of microarray-comparative genomic hybridization (array-CGH or aCGH) data which is based on Matlab. Full process of aCGH analysis, from denoising of the raw data to the visualization of the desired results, can be obtained via Mat-aCGH straight-forwardly. The main advantage of this toolbox is that it is collection of recent well-known statistical and information theoretic methods and algorithms for analyzing aCGH data. More importantly, the proposed toolbox is developed for multisample analysis which is one of the current challenges in this area. Mat-aCGH is convenient to apply for any format of data, robust against diverse noise and provides the users with valuable information in the form of diagrams and metrics. Therefore, it eliminates the needs of another software or package for multisample aCGH analysis.

Microchemical imaging in biomedical research

1992 ◽  
Vol 50 (2) ◽  
pp. 1118-1119
Author(s):  
P. Ingram
Keyword(s):  
Data Analysis ◽  
Electron Probe ◽  
The Other ◽  
X Ray ◽  
Cell Element ◽  
Physiological Information ◽  
Functional States ◽  
Elemental Maps ◽  
Electron Energy Loss ◽  
Secondary Ion

It is well established that unique physiological information can be obtained by rapidly freezing cells in various functional states and analyzing the cell element content and distribution by electron probe x-ray microanalysis. (The other techniques of microanalysis that are amenable to imaging, such as electron energy loss spectroscopy, secondary ion mass spectroscopy, particle induced x-ray emission etc., are not addressed in this tutorial.) However, the usual processes of data acquisition are labor intensive and lengthy, requiring that x-ray counts be collected from individually selected regions of each cell in question and that data analysis be performed subsequent to data collection. A judicious combination of quantitative elemental maps and static raster probes adds not only an additional overall perception of what is occurring during a particular biological manipulation or event, but substantially increases data productivity. Recent advances in microcomputer instrumentation and software have made readily feasible the acquisition and processing of digital quantitative x-ray maps of one to several cells.

Perceptions of a Collaborative Professional Learning Program: Seeing the “Bigger Picture”

2020 ◽  
Vol 5 (1) ◽  
pp. 290-303
Author(s):  
P. Charlie Buckley ◽  
Kimberly A. Murza ◽  
Tami Cassel
Keyword(s):  
Data Analysis ◽  
Professional Learning ◽  
Social Communication ◽  
Special Educators ◽  
Service Providers ◽  
Integrative Approach ◽  
Theory Approach ◽  
Learning Program ◽  
Speech Language Pathologists ◽  
Related Service

Purpose The purpose of this study was to explore the perceptions of special education practitioners (i.e., speech-language pathologists, special educators, para-educators, and other related service providers) on their role as communication partners after participation in the Social Communication and Engagement Triad (Buckley et al., 2015 ) yearlong professional learning program. Method A qualitative approach using interviews and purposeful sampling was used. A total of 22 participants who completed participation in either Year 1 or Year 2 of the program were interviewed. Participants were speech-language pathologists, special educators, para-educators, and other related service providers. Using a grounded theory approach (Glaser & Strauss, 1967 ) to data analysis, open, axial, and selective coding procedures were followed. Results Three themes emerged from the data analysis and included engagement as the goal, role as a communication partner, and importance of collaboration. Conclusions Findings supported the notion that educators see the value of an integrative approach to service delivery, supporting students' social communication and engagement across the school day but also recognizing the challenges they face in making this a reality.

Communicative Performance of Adolescents with Severe Speech Impairment

1989 ◽  
Vol 54 (3) ◽  
pp. 403-421 ◽  
Author(s):  
Beth M. Dalton ◽  
Jan L. Bedrosian
Keyword(s):  
Data Analysis ◽  
Peer Interactions ◽  
Consistent Pattern ◽  
Clinical Implications ◽  
Speech Impairment ◽  
Communication Mode ◽  
Mode Function ◽  
Communicative Performance ◽  
Therapy Room ◽  
Communication Board

The communicative performance of 4 preoperational-level adolescents, using limited speech, gestures, and communication board techniques, was examined in a two-part investigation. In Part 1, each subject participated in an academic interaction with a teacher in a therapy room. Data were transcribed and coded for communication mode, function, and role. Two subjects were found to predominantly use the speech mode, while the remaining 2 predominantly used board and one other mode. The majority of productions consisted of responses to requests, and the initiator role was infrequently occupied. These findings were similar to those reported in previous investigations conducted in classroom settings. In Part 2, another examination of the communicative performance of these subjects was conducted in spontaneous interactions involving speaking and nonspeaking peers in a therapy room. Using the same data analysis procedures, gesture and speech modes predominated for 3 of the subjects in the nonspeaking peer interactions. The remaining subject exhibited minimal interaction. No consistent pattern of mode usage was exhibited across the speaking peer interactions. In the nonspeaking peer interactions, requests predominated. In contrast, a variety of communication functions was exhibited in the speaking peer interactions. Both the initiator and the maintainer roles were occupied in the majority of interactions. Pertinent variables and clinical implications are discussed.

Introduction to Computer-Intensive Methods of Data Analysis in Biology

2006 ◽  
Author(s):  
Derek A. Roff
Keyword(s):  
Data Analysis

Data Analysis Using Regression and Multilevel/Hierarchical Models

2006 ◽  
Author(s):  
Andrew Gelman ◽  
Jennifer Hill
Keyword(s):  
Data Analysis ◽  
Hierarchical Models ◽  
Multilevel Hierarchical Models

Bayesian Logical Data Analysis for the Physical Sciences

2005 ◽  
Author(s):  
Phil Gregory
Keyword(s):  
Data Analysis ◽  
Physical Sciences ◽  
Logical Data
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