scholarly journals Reactivity of human convalescent sera with influenza virus hemagglutinin protein mutants at antigenic site A

2012 ◽  
Vol 56 (2) ◽  
pp. 99-106 ◽  
Author(s):  
Eri Nobusawa ◽  
Katsumi Omagari ◽  
Setsuko Nakajima ◽  
Katsuhisa Nakajima
mSphere ◽  
2018 ◽  
Vol 3 (1) ◽  
Author(s):  
Eili Y. Klein ◽  
Deena Blumenkrantz ◽  
Adrian Serohijos ◽  
Eugene Shakhnovich ◽  
Jeong-Mo Choi ◽  
...  

ABSTRACTProtein thermodynamics are an integral determinant of viral fitness and one of the major drivers of protein evolution. Mutations in the influenza A virus (IAV) hemagglutinin (HA) protein can eliminate neutralizing antibody binding to mediate escape from preexisting antiviral immunity. Prior research on the IAV nucleoprotein suggests that protein stability may constrain seasonal IAV evolution; however, the role of stability in shaping the evolutionary dynamics of the HA protein has not been explored. We used the full coding sequence of 9,797 H1N1pdm09 HA sequences and 16,716 human seasonal H3N2 HA sequences to computationally estimate relative changes in the thermal stability of the HA protein between 2009 and 2016. Phylogenetic methods were used to characterize how stability differences impacted the evolutionary dynamics of the virus. We found that pandemic H1N1 IAV strains split into two lineages that had different relative HA protein stabilities and that later variants were descended from the higher-stability lineage. Analysis of the mutations associated with the selective sweep of the higher-stability lineage found that they were characterized by the early appearance of highly stabilizing mutations, the earliest of which was not located in a known antigenic site. Experimental evidence further suggested that H1N1 HA stability may be correlated within vitrovirus production and infection. A similar analysis of H3N2 strains found that surviving lineages were also largely descended from viruses predicted to encode more-stable HA proteins. Our results suggest that HA protein stability likely plays a significant role in the persistence of different IAV lineages.IMPORTANCEOne of the constraints on fast-evolving viruses, such as influenza virus, is protein stability, or how strongly the folded protein holds together. Despite the importance of this protein property, there has been limited investigation of the impact of the stability of the influenza virus hemagglutinin protein—the primary antibody target of the immune system—on its evolution. Using a combination of computational estimates of stability and experiments, our analysis found that viruses with more-stable hemagglutinin proteins were associated with long-term persistence in the population. There are two potential reasons for the observed persistence. One is that more-stable proteins tolerate destabilizing mutations that less-stable proteins could not, thus increasing opportunities for immune escape. The second is that greater stability increases the fitness of the virus through increased production of infectious particles. Further research on the relative importance of these mechanisms could help inform the annual influenza vaccine composition decision process.


1993 ◽  
Vol 67 (2) ◽  
pp. 933-942 ◽  
Author(s):  
J W Yewdell ◽  
A Taylor ◽  
A Yellen ◽  
A Caton ◽  
W Gerhard ◽  
...  

Viruses ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 624
Author(s):  
Yaqin Bai ◽  
Jeremy C. Jones ◽  
Sook-San Wong ◽  
Mark Zanin

Hemagglutinin and neuraminidase, which constitute the glycoprotein spikes expressed on the surface of influenza A and B viruses, are the most exposed parts of the virus and play critical roles in the viral lifecycle. As such, they make prominent targets for the immune response and antiviral drugs. Neuraminidase inhibitors, particularly oseltamivir, constitute the most commonly used antivirals against influenza viruses, and they have proved their clinical utility against seasonal and emerging influenza viruses. However, the emergence of resistant strains remains a constant threat and consideration. Antivirals targeting the hemagglutinin protein are relatively new and have yet to gain global use but are proving to be effective additions to the antiviral repertoire, with a relatively high threshold for the emergence of resistance. Here we review antiviral drugs, both approved for clinical use and under investigation, that target the influenza virus hemagglutinin and neuraminidase proteins, focusing on their mechanisms of action and the emergence of resistance to them.


1988 ◽  
Vol 62 (1) ◽  
pp. 305-312 ◽  
Author(s):  
L E Brown ◽  
R A Ffrench ◽  
J M Gawler ◽  
D C Jackson ◽  
M L Dyall-Smith ◽  
...  

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