scholarly journals A novel mutation at the DFNA36 hearing loss locus reveals a critical function and potential genotype-phenotype correlation for amino acid-572 of TMC1

2007 ◽  
Vol 71 (2) ◽  
pp. 148-152 ◽  
Author(s):  
S Kitajiri ◽  
T Makishima ◽  
TB Friedman ◽  
AJ Griffith
Brain ◽  
2014 ◽  
Vol 138 (2) ◽  
pp. e327-e327 ◽  
Author(s):  
Daniel Carvalho ◽  
Savana Santos ◽  
Bernardo Martins ◽  
Fernanda Pinto Marques

PLoS ONE ◽  
2015 ◽  
Vol 10 (6) ◽  
pp. e0128691 ◽  
Author(s):  
Jing Zheng ◽  
Zhengbiao Ying ◽  
Zhaoyang Cai ◽  
Dongmei Sun ◽  
Zheyun He ◽  
...  

2006 ◽  
Vol 51 (5) ◽  
pp. 455-460 ◽  
Author(s):  
Fumiaki Kamada ◽  
Shigeo Kure ◽  
Takayuki Kudo ◽  
Yoichi Suzuki ◽  
Takeshi Oshima ◽  
...  

2016 ◽  
Vol 175 (2) ◽  
pp. 107-116 ◽  
Author(s):  
Daniel F de Carvalho ◽  
Mirela C Miranda ◽  
Larissa G Gomes ◽  
Guiomar Madureira ◽  
José A M Marcondes ◽  
...  

Background Most congenital adrenal hyperplasia (CAH) patients carry CYP21A2 mutations derived from conversion events involving the pseudogene, and the remaining carry new mutations. Objective To review causal mutations and genotype–phenotype correlation in 480 Brazilian patients. Methods DNA was extracted from 158 salt-wasters (SWs), 116 simple virilizing (SV), and 206 nonclassical (NC) patients. Fourteen point mutations were screened by allele-specific PCR, large rearrangements by Southern blotting/MLPA, and sequencing was performed in those with incomplete genotype. The gene founder effect was analyzed by microsatellite studies. Patients were divided into six genotypes (Null; A: <2%; B: 3–7%; C: >20% of residual enzymatic activity (EA); D: unknown EA; E: incomplete genotype). Results Targeted methodologies defined genotype in 87.6% of classical and in 80% of NC patients and the addition of sequencing in 100 and 83.5%, respectively. The most frequent mutations were p.V281L (26.6% of alleles), IVS2-13A/C>G (21.1%), and p.I172N (7.5%); seven rare mutations and one novel mutation (p.E351V) were identified. Gene founder effect was observed in all but one (p.W19X) mutation. Null, A, B, and C genotypes correlated with SW (88%), SW (70%), SV (98%), and NC forms (100%), respectively. In group D, the p.E351V mutation correlated with classical form and group E comprised exclusively NC-patients. ACTH-stimulated 17OHP level of 44.3ng/mL was the best cutoff to identify NC-patients carrying severe mutations. Conclusions We identified a good genotype–phenotype correlation in CAH, providing useful data regarding prediction of disease’s severity; moreover, we suggest that ACTH-stimulated 17OHP levels could predict carrier status for severe mutations. Sequencing is essential to optimize molecular diagnosis in Brazilian CAH patients.


2021 ◽  
pp. jmedgenet-2020-107594
Author(s):  
Bong Jik Kim ◽  
Hyoung Won Jeon ◽  
Woosung Jeon ◽  
Jin Hee Han ◽  
Jayoung Oh ◽  
...  

BackgroundDown-sloping sensorineural hearing loss (SNHL) in people in their teens and 20s hampers efficient learning and communication and in-depth social interactions. Nonetheless, its aetiology remains largely unclear, with the exception of some potential causative genes, none of which stands out especially in people in their teens and 20s. Here, we examined the role and genotype–phenotype correlation of lipoxygenase homology domain 1 (LOXHD1) in down-sloping SNHL through a cohort study.MethodsBased on the Seoul National University Bundang Hospital (SNUBH) genetic deafness cohort, in which the patients show varying degrees of deafness and different onset ages (n=1055), we have established the ‘SNUBH Teenager–Young Adult Down-sloping SNHL’ cohort (10–35 years old) (n=47), all of whom underwent exome sequencing. Three-dimensional molecular modelling, minigene splicing assay and short tandem repeat marker genotyping were performed, and medical records were reviewed.ResultsLOXHD1 accounted for 33.3% of all genetically diagnosed cases of down-sloping SNHL (n=18) and 12.8% of cases in the whole down-sloping SNHL cohort (n=47) of young adults. We identified a potential common founder allele, as well as an interesting genotype–phenotype correlation. We also showed that transcript 6 is necessary and probably sufficient for normal hearing.ConclusionsLOXHD1 exceeds other genes in its contribution to down-sloping SNHL in young adults, rising as a signature causative gene, and shows a potential but interesting genotype–phenotype correlation.


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