scholarly journals Geographic patterns of song variation in four species of Malurus fairy-wrens

2018 ◽  
Vol 49 (2) ◽  
pp. jav-01446 ◽  
Author(s):  
David D. Yandell ◽  
Wesley M. Hochachka ◽  
Stephen Pruett-Jones ◽  
Michael S. Webster ◽  
Emma I. Greig
Keyword(s):  
Song Variation ◽  
Geographic Patterns

scholarly journals Geographic patterns of song variation reveal timing of song acquisition in a wild avian population

2017 ◽  
Vol 28 (4) ◽  
pp. 1085-1092 ◽  
Author(s):  
Louis Ranjard ◽  
Sarah J Withers ◽  
Dianne H Brunton ◽  
Stuart Parsons ◽  
Howard A Ross
Keyword(s):  
Song Variation ◽  
Geographic Patterns ◽  
Song Acquisition

Geographic patterns of endemic seed plant genera diversity in China

2011 ◽  
Vol 19 (4) ◽  
pp. 414-423 ◽  
Author(s):  
Chen Shengbin ◽  
Ouyang Zhiyun ◽  
Fang Yu ◽  
Li Zhenji
Keyword(s):  
Seed Plant ◽  
Geographic Patterns

scholarly journals Identification of Epidemiological Traits by Analysis of SARS−CoV−2 Sequences

Viruses ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 764
Author(s):  
Bohu Pan ◽  
Zuowei Ji ◽  
Sugunadevi Sakkiah ◽  
Wenjing Guo ◽  
Jie Liu ◽  
...  
Keyword(s):  
Clustering Analysis ◽  
Phylogenetic Trees ◽  
Sequence Similarity ◽  
Host Age ◽  
Hierarchical Clustering Analysis ◽  
Genome Sequences ◽  
Geographic Patterns ◽  
Rapid Spread ◽  
Pairwise Sequence Similarity ◽  
Sequence Similarity Analysis

Severe acute respiratory syndrome coronavirus 2 (SARS−CoV−2) has caused the ongoing global COVID-19 pandemic that began in late December 2019. The rapid spread of SARS−CoV−2 is primarily due to person-to-person transmission. To understand the epidemiological traits of SARS−CoV−2 transmission, we conducted phylogenetic analysis on genome sequences from >54K SARS−CoV−2 cases obtained from two public databases. Hierarchical clustering analysis on geographic patterns in the resulting phylogenetic trees revealed a co-expansion tendency of the virus among neighboring countries with diverse sources and transmission routes for SARS−CoV−2. Pairwise sequence similarity analysis demonstrated that SARS−CoV−2 is transmitted locally and evolves during transmission. However, no significant differences were seen among SARS−CoV−2 genomes grouped by host age or sex. Here, our identified epidemiological traits provide information to better prevent transmission of SARS−CoV−2 and to facilitate the development of effective vaccines and therapeutics against the virus.

A desert songbird with no confamilials in the Western Hemisphere (Verdin, Auriparus flaviceps) investigates divergent conspecific songs

The Auk ◽  
2021 ◽  
Author(s):  
Emma I Greig ◽  
Eva Kinnebrew ◽  
Max L Witynski ◽  
Eric C Larsen
Keyword(s):  
North America ◽  
Geographic Variation ◽  
Playback Experiment ◽  
Western Hemisphere ◽  
Monotypic Genus ◽  
Vocal Responses ◽  
Song Variation ◽  
Desert Regions ◽  
Close Relatives

Abstract Most birds that show geographic variation in their songs discriminate between local and foreign songs, which may help them avoid unnecessary conflicts with vagrant individuals or similar-sounding congeners. However, some species respond equally to foreign and local songs, which may be useful if foreign individuals present territorial threats or if there are no sympatric congeners to avoid. Species without sympatric congeners are not commonly tested in playback studies, but they offer an opportunity to see how song variation and recognition unfolds when the pressure to avoid similar congeners is absent. Here, we use Verdins (Auriparus flaviceps), a monotypic genus of songbird with no confamilials in North America, to explore song variation and recognition in a species living without close relatives. We assessed geographic variation in song across the Verdin range and conducted a playback experiment using exemplars from 2 acoustically divergent and geographically distant regions as treatments. We found significant geographic variation in song that mapped well onto ecologically distinct desert regions. We found that Verdins had stronger vocal responses to local-sounding songs, but had equal movement responses to local-sounding and foreign songs. These results are similar to results found in other species without sympatric congeners and provide an example of a species that investigates acoustically divergent conspecific songs, despite recognizing salient differences in those songs.

Analysis of taxonomic and geographic patterns of Turkish Veronica orientalis using nuclear and plastid DNA and morphological data

2013 ◽  
Vol 300 (4) ◽  
pp. 645-664 ◽  
Author(s):  
Mubo A. Sonibare ◽  
Metin Armagan ◽  
Fevzi Özgökce ◽  
Ahmet Emre Yaprak ◽  
Eike Mayland-Quellhorst ◽  
...  
Keyword(s):  
Plastid Dna ◽  
Morphological Data ◽  
Geographic Patterns

GEOGRAPHIC PATTERNS IN PLANT–POLLINATOR MUTUALISTIC NETWORKS: COMMENT

Ecology ◽  
2004 ◽  
Vol 85 (3) ◽  
pp. 875-878 ◽  
Author(s):  
Kathleen M. Kay ◽  
Douglas W. Schemske
Keyword(s):  
Geographic Patterns ◽  
Mutualistic Networks ◽  
Plant Pollinator

scholarly journals Regional variation in otolith geochemistry of juvenile Atlantic cod (Gadus morhua) in coastal Newfoundland

2016 ◽  
Vol 73 (10) ◽  
pp. 1507-1519 ◽  
Author(s):  
Ryan R.E. Stanley ◽  
Claudio DiBacco ◽  
Simon R. Thorrold ◽  
Paul V.R. Snelgrove ◽  
Corey J. Morris ◽  
...  
Keyword(s):  
Gadus Morhua ◽  
Environmental Variability ◽  
Atlantic Cod ◽  
Environmental Influence ◽  
Spatial Scales ◽  
Early Life History ◽  
Otolith Chemistry ◽  
Geographic Patterns ◽  
Assignment Success ◽  
Scale Classification

We examined spatial variation in otolith geochemistry as a natural tag in juvenile Atlantic cod (Gadus morhua) to resolve geographic patterns during early life history. Individuals from 54 inshore sites spanned five embayments in eastern Newfoundland. Otolith composition differed at all spatial scales and related inversely to spatial scale. Classification analysis revealed increasing discrimination at coarser spatial scales: site (26%–58%), bay (49%), and coast (76%). Assignment success declined by ∼10% per added site with increasing sampling sites per bay, demonstrating fine-scale (<100 km) variation. When we partitioned environmental variability from observed otolith chemistry using predictive models, assignment success improved by 56%, 14%, and 5% for site, bay, and coast, respectively. Our results demonstrate environmental influence on spatial structure of otolith chemistry and illustrate the importance of resolving baseline variability in otolith chemistry when conducting assignment tests. Collectively, our results describe the potential utility of juvenile otolith composition in evaluating contributions of subpopulations to the Northwest Atlantic cod stock and highlight important limitations imposed by environmental variation at scales less than 100 km.

Geographic patterns of genetic diversity in North American trees: a continent-wide analysis

2021 ◽  
Author(s):  
Andrew V. Gougherty
Keyword(s):  
Genetic Diversity ◽  
Population Genetics ◽  
North America ◽  
North American ◽  
Tree Species ◽  
Geographic Patterns ◽  
Study Characteristics ◽  
Dispersal Traits ◽  
The Last Glacial Maximum ◽  
The Last Glacial

In the northern hemisphere, many species have been reported to have greater genetic diversity in southern populations than northern populations - ostensibly due to migration northward following the last glacial maximum (LGM). The generality of this pattern, while well-established for some taxa, remains unclear for North American trees. To address this issue, I collected published population genetics data for 73 North American tree species, and tested whether genetic diversity was associated with latitude or longitude and whether geographic trends were associated with dispersal traits, range or study characteristics. I found there were no general geographic patterns in genetic diversity, and the strength of the geographic gradients were not associated with any species or study characteristics. Species in the northern and western regions of North America tended to have more species with genetic diversity that declined with latitude, but most species had no significant trend. This work shows that North American trees have complex, individualistic, patterns of genetic diversity that may negate explanation by any particular dispersal trait or range characteristic.

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