scholarly journals Isolation and Characterization of a Mutant of Arthrobacter sp. Strain GLP-1 Which Utilizes the Herbicide Glyphosate as Its Sole Source of Phosphorus and Nitrogen

1988 ◽  
Vol 54 (11) ◽  
pp. 2868-2870 ◽  
Author(s):  
Rüdiger Pipke ◽  
Nikolaus Amrhein
2002 ◽  
Vol 45 (12) ◽  
pp. 175-179 ◽  
Author(s):  
J.H. Shi ◽  
Y. Suzuki ◽  
B.-D. Lee ◽  
S. Nakai ◽  
M. Hosomi

We cultivated hundreds of sediment, soil, and manure samples taken from rivers and farms in a medium containing ethynylestradiol (EE2) as the sole source of carbon, so that microorganisms in the samples would acclimatize to the presence of EE2. Finally, we isolated an EE2-degrading microorganism, designated as strain HNS-1, from a cowshed sample. Based on its partial nucleotide sequence (563 bp) of the 28S rRNA gene, strain HNS-1 was identified as Fusarium proliferatum. Over 15 days, F. proliferatum strain HNS-1 removed 97% of EE2 at an initial concentration of 25 mg.L−1, with a first-order rate constant of 0.6 d−1. Unknown products of EE2 degradation, which may be more polar compounds that have a phenolic group, remained in the culture medium.


1978 ◽  
Vol 33 (1-2) ◽  
pp. 120-123 ◽  
Author(s):  
Hartmut Blecher ◽  
Renate Blecher ◽  
Rudolf Müller ◽  
Franz Lingens

Abstract Five different strains of bacteria ultilizing antipyrine as sole source of carbon were isolated from soil. It was shown by morphological and physiological examinations, that the new isolates are closely related to strains selected with the herbicide chloridazon. A ll of these bacteria are charac­ terized by special features and cannot be classified according to Bergey’s Manual of Determinative Bacteriology.Part of the strains which were selected with antipyrine not only grow with antipyrine but also with chloridazon. The others cannot be grown on chloridazon. However, resting cells of the latter group convert chloridazon to its catechol derivative (5-amino-4-chloro-2 (2,3-dihydroxyphenyl) -3 (2H)-pyridazinone). In these bacteria a catechol-2,3-dioxygenase (catechol: oxygen 2,3-oxido-reductase, EC 1.13.11.2) was found which readily catalyzes the cleavage of the catechol derivative of antipyrine (2,3-dimethyl-l-(2,3-dihydroxyphenyl)-pyrazolone (5)). The enzyme shows only slight activity with the corresponding derivative of chloridazon.


2012 ◽  
Vol 61 (4) ◽  
pp. 257-262 ◽  
Author(s):  
FANG-BO YU ◽  
WASEEM ALI SHINAWAR ◽  
ING-YA SUN ◽  
LIN-PING LUO

Aerobic bacteria degrading endosulfan were isolated from contaminated sludge. One of the isolates, LD-6, was identified as Stenotrophomonas sp. The bacterium could utilize endosulfan as the sole source of carbon and sulfur. 100 mg/l endosulfan was completely degraded within 10 days, and endosulfan diol and endosulfan ether were detected as major metabolites with a slight decrease in culture pH. The results indicated that Stenotrophomonas. sp. LD-6 might degrade endosulfan by a non-oxidative pathway. Biodegradation of both isomers was relatively better at a temperature range of 25-35 degrees C, with a maximum at 30 degrees C. In addition, cell crude extract of strain LD-6 could metabolize endosulfan rapidly, and degradative enzymes were intracellular distributed and constitutively expressed. Besides, application of the strain was found to promote the removal of endosulfan in soil. This study might help with the future research in better understanding of the biodegradation.


2000 ◽  
Vol 46 (3) ◽  
pp. 211-217 ◽  
Author(s):  
Razia Kutty ◽  
Hemant J Purohit ◽  
Purushottam Khanna

Pseudomonas sp. strain PH1 was isolated from soil contaminated with pharmaceutical and dye industry waste. The isolate PH1 could use m-aminophenol as a sole source of carbon, nitrogen, and energy to support the growth. PH1 could degrade up to 0.32 mM m-aminophenol in 120 h, when provided as nitrogen source at 0.4 mM concentration with citrate (0.5 mM) as a carbon source in the growth medium. The presence of ammonium chloride as an additional nitrogen source repressed the degradation of m-aminophenol by PH1. To identify strain PH1, the 16S rDNA sequence was amplified by PCR using conserved eubacterial primers. The FASTA program was used to analyze the 16S rDNA sequence and the resulting homology patterns suggested that PH1 is a Pseudomonas.Key words: m-aminophenol, resorcinol, DNA sequencing.


1998 ◽  
Vol 44 (8) ◽  
pp. 734-742
Author(s):  
Mercè Casellas ◽  
Magdalena Grifoll ◽  
Jordi Sabaté ◽  
Anna Maria Solanas

Pseudomonas mendocina MC2, able to use 9-fluorenone but not fluorene as its sole source of carbon and energy, was isolated. Identification of metabolites in growth media and washed cell suspensions indicated that strain MC2 metabolizes 9-fluorenone via angular dioxygenation of the ketone, to give 1,1a-dihydroxy-1-hydro-9-fluorenone, followed by the opening of the five-membered ring and further degradation of the resulting biphenyl derivative by reactions akin to those of biphenyl metabolism, which produce phthalate as an intermediate. The aim of this research was to study the biodegradation of fluorene by a co-culture of strain MC2 and Arthrobacter sp.strain F101, which grows on fluorene and simultaneously transforms a fraction of the substrate to 9-fluorenone, which accumulates as a dead-end product. Growing with 0.1 g fluorene/L, Arthrobacter sp. strain F101 caused the total removal of this compound from the cultures, but when this strain was grown with 1g fluorene/L, only 16% of the fluorene was used. The addition of 9-fluorenone to cultures growing on fluorene showed that 9-fluorenone inhibits fluorene degradation. Finally, when Pseudomonas mendocina MC2 and Arthrobacter sp. strain F101 were co-cultured with 1g fluorene/L as a sole source of carbon and energy, the growth of the strains completely removed fluorene in 2 days. 9-Fluorenone did not accumulate and the carbon assimilation into cell biomass was estimated as approximately 46%. Key words: microbial consortium, fluorene, 9-fluorenone, biodegradation.


2016 ◽  
Vol 42 (3) ◽  
pp. 25-32 ◽  
Author(s):  
Alexis Nzila ◽  
Assad Thukair ◽  
Saravanan Sankara ◽  
Basheer Chanbasha ◽  
Musa M. Musa

Abstract Bioremediation is based on microorganisms able to use pollutants either as a source of carbon or in co-metabolism, and is a promising strategy in cleaning the environment. Using soil contaminated with petroleum products from an industrial area in Saudi Arabia (Jubail), and after enrichment with the polycyclic aromatic hydrocarbon (PAH) naphthalene, a Methylobacterium radiotolerans strain (N7A0) was isolated that can grow in the presence of naphthalene as the sole source of carbon. M. radiotolerans is known to be resistant to gamma radiation, and this is the first documented report of a strain of this bacterium using a PAH as the sole source of carbon. The commonly reported Pseudomonas aeruginosa (strain N7B1) that biodegrades naphthalene was also identified, and gas chromatography analyses have shown that the biodegradation of naphthalene by M. radiotolerans and P. aeruginosa did follow both the salicylate and phthalate pathways.


2000 ◽  
Vol 66 (5) ◽  
pp. 2139-2147 ◽  
Author(s):  
Shirley F. Nishino ◽  
George C. Paoli ◽  
Jim C. Spain

ABSTRACT An oxidative pathway for the mineralization of 2,4-dinitrotoluene (2,4-DNT) by Burkholderia sp. strain DNT has been reported previously. We report here the isolation of additional strains with the ability to mineralize 2,4-DNT by the same pathway and the isolation and characterization of bacterial strains that mineralize 2,6-dinitrotoluene (2,6-DNT) by a different pathway.Burkholderia cepacia strain JS850 andHydrogenophaga palleronii strain JS863 grew on 2,6-DNT as the sole source of carbon and nitrogen. The initial steps in the pathway for degradation of 2,6-DNT were determined by simultaneous induction, enzyme assays, and identification of metabolites through mass spectroscopy and nuclear magnetic resonance. 2,6-DNT was converted to 3-methyl-4-nitrocatechol by a dioxygenation reaction accompanied by the release of nitrite. 3-Methyl-4-nitrocatechol was the substrate for extradiol ring cleavage yielding 2-hydroxy-5-nitro-6-oxohepta-2,4-dienoic acid, which was converted to 2-hydroxy-5-nitropenta-2,4-dienoic acid. 2,4-DNT-degrading strains also converted 2,6-DNT to 3-methyl-4-nitrocatechol but did not metabolize the 3-methyl-4-nitrocatechol. Although 2,6-DNT prevented the degradation of 2,4-DNT by 2,4-DNT-degrading strains, the effect was not the result of inhibition of 2,4-DNT dioxygenase by 2,6-DNT or of 4-methyl-5-nitrocatechol monooxygenase by 3-methyl-4-nitrocatechol.


1996 ◽  
Vol 42 (3) ◽  
pp. 221-226 ◽  
Author(s):  
L. L. Smith-Grenier ◽  
A. Adkins

Six nonfermentative Gram-negative bacilli were isolated from Manitoban soils after enrichment with diclofopmethyl. Microscopic examination and physiological and biochemical tests have identified the organisms as Sphingomonas paucimobilis, Acinetobacter baumannii, Chryseomonas luteola, Pseudomonas aureofaciens, Pseudomonas cepacia, and Pseudomonas fluorescens. Growth curve studies showed that each of the isolates was able to grow in minimal medium with diclofop-methyl as the sole source of carbon and energy. Chemical analysis confirmed that all of the added diclofop-methyl (1.5 μg ∙ mL−1) had been utilized after 31 h of incubation at 25 °C Key words: diclofop-methyl, biodegradation, herbicide.


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