scholarly journals Draft Genome Sequence of Mycobacterium porcinum CSURP1564

2018 ◽  
Vol 6 (16) ◽  
pp. e00291-18 ◽  
Author(s):  
A. Bouam ◽  
A. Levasseur ◽  
M. Drancourt
Keyword(s):  
Dna Hybridization ◽  
In Silico ◽  
Opportunistic Infections ◽  
Draft Genome ◽  
Mycobacterium Fortuitum ◽  
Protein Coding ◽  
Content Type ◽  
Environmental Mycobacterium ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Mycobacterium porcinum is a rapidly growing environmental mycobacterium responsible for opportunistic infections. The 7,025,616-bp draft genome of M. porcinum strain CSURP1564 exhibits a 66.71% G+C content, 6,687 protein-coding genes, and 65 predicted RNA genes. In silico DNA-DNA hybridization confirms its assignment to the Mycobacterium fortuitum complex.

scholarly journals Draft Genome Sequence of Mycobacterium boenickei CIP 107829

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Amar Bouam ◽  
Catherine Robert ◽  
Olivier Croce ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
United States ◽  
Dna Hybridization ◽  
Draft Genome ◽  
The United States ◽  
Mycobacterium Fortuitum ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
First Time ◽  
Rna Genes

ABSTRACT Mycobacterium boenickei is a rapidly growing mycobacterium isolated for the first time from a leg wound in the United States. Its 6,506,908-bp draft genome exhibits a 66.77% G+C content, 6,279 protein-coding genes, and 59 predicted RNA genes. In silico DNA-DNA hybridization confirms its assignment to the Mycobacterium fortuitum complex.

scholarly journals Draft Genome Sequence of the Multiple Antibiotic Producer Bacillus velezensis X-BIO-1

2020 ◽  
Vol 9 (50) ◽  
Author(s):  
S. V. Kravchenko ◽  
D. V. Poshvina ◽  
A. V. Vasilchenko ◽  
A. S. Vasilchenko
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Bacillus Velezensis ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Here, we describe the draft genome sequence of Bacillus velezensis strain X-BIO-1, which contains 16 contigs, comprising 3,861,135 bp with a G+C content of 46.54%. The annotated draft genome contains 3,710 protein-coding genes and 62 RNA genes. We identified genes responsible for the synthesis of various antibiotics.

scholarly journals Draft Genome Sequence of Salirhabdus euzebyi Strain Q1438

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Rita Zgheib ◽  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacterial Isolate ◽  
Draft Genome ◽  
Sea Salt ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

In 2007, Salirhabdus euzebyi was first described as a bacterial isolate from a sea salt evaporation pond. As no genome sequence was previously available for this species, we performed whole-genome sequencing. The chromosome of strain Q1438 was 3,784,443 bp long with 36% G+C content, 3,830 protein-coding genes, and 74 RNA genes.

scholarly journals Draft Genome Sequence of Mycobacterium colombiense

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Amar Bouam ◽  
Catherine Robert ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Positive Patient ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Mycobacterium colombiense is a rapidly growing mycobacterium initially isolated from the blood of an HIV-positive patient in Colombia. Its 5,854,893-bp draft genome exhibits a G+C content of 67.64%, 5,233 protein-coding genes, and 54 predicted RNA genes.

scholarly journals Draft Genome Sequence of Lactobacillus plantarum EBKLp545, Isolated from Piglet Feces

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Sukjung Choi ◽  
Eun Bae Kim
Keyword(s):  
South Korea ◽  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Noncoding Rna ◽  
Draft Genome ◽  
Illumina Hiseq ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

Lactobacillus plantarum strain EBKLp545 was isolated from piglet feces in South Korea and sequenced using an Illumina HiSeq system. This draft genome of strain EBKLp545 consists of 3,306,513 bp with 3,049 protein-coding genes in 138 contigs (≥500 bp), 54 noncoding RNA genes, and a 44.3% G+C content.

scholarly journals Genome Sequence of the Thermophilic Soil Bacterium Ureibacillus terrenus ATCC BAA-384 T

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Milto Simoes Junior ◽  
Kyle S. MacLea
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Genome Length ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Uncultivated Soil ◽  
Rna Genes

Ureibacillus terrenus TH9A T (=ATCC BAA-384 T ) was isolated from uncultivated soil in Italy in 1995. We present a draft genome sequence for the type strain, with a predicted genome length of 2,936,851 bp, containing 2,766 protein-coding genes, 82 RNA genes, and 5 CRISPR arrays, with a G+C content of 42.5%.

scholarly journals Draft Genome Sequence of “Nocardia suismassiliense” Strain S-137 (CSUR P4007)

2018 ◽  
Vol 6 (16) ◽  
pp. e00212-18
Author(s):  
Mustapha Fellag ◽  
Anthony Levasseur ◽  
Jérémy Delerce ◽  
Fadi Bittar ◽  
Jean-Lou Marié ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Dna Hybridization ◽  
Sus Scrofa ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
A New Species

ABSTRACT “Nocardia suismassiliense” strain S-137 isolated from Sus scrofa feces exhibits a 9.4-Mb (67.1% GC content) draft genome sequence containing 8,658 protein-coding genes, 66 tRNAs, and 9 rRNAs. In silico DNA-DNA hybridization confirmed strain S-137 as representative of a new species, “Nocardia suismassiliense,” closely related to N. tenerifensis and N. brasiliensis.

scholarly journals Draft Genome Sequence of Mycobacterium shimoidei Strain P7336

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Jamal Saad ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Messenger Rna ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nontuberculous Mycobacterium ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Slow Growing ◽  
Rna Genes

Mycobacterium shimoidei, a slow-growing, nontuberculous mycobacterium initially isolated from a Japanese man, is a rare opportunistic lung pathogen. The 4,842,631-bp draft genome of M. shimoidei strain P7336 exhibits a 65.7% G+C content, 4,643 protein-coding genes, and 57 predicted RNA genes, including 49 tRNAs, 7 rRNA operons, and 1 transfer-messenger RNA.

scholarly journals Draft Genome Sequence ofMycobacterium peregrinumStrain CSUR P2098

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Shady Asmar ◽  
Nicolás Rascovan ◽  
Catherine Robert ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Mycobacterium Fortuitum ◽  
Type I ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Rna Genes

Mycobacterium peregrinumis a nonpigmented rapid growing nontuberculosis species belonging to theMycobacterium fortuitumgroup. The draft genome ofM. peregrinumtype I CSUR P2098 comprises 7,109,836 bp exhibiting a 66.23% G+C content, 6,894 protein-coding genes, and 100 predicted RNA genes. Its genome analysis suggests this species differs fromMycobacterium senegalense.

scholarly journals Draft Genome Sequence of Mycobacterium neworleansense Strain ATCC 49404 T

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Shady Asmar ◽  
Catherine Robert ◽  
Olivier Croce ◽  
Aurelia Caputo ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Mycobacterium Fortuitum ◽  
Strain Atcc ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Rna Genes

Mycobacterium neworleansense is a rapid growing nontuberculosis species belonging to the Mycobacterium fortuitum complex. The draft genome of M. neworleansense ATCC 49404 T comprises 6,287,317 bp exhibiting a 66.85% G+C content, 5,997 protein-coding genes, and 89 predicted RNA genes.

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