scholarly journals Complete Genome Sequences of Two Salmonella Viruses, VSe11 and VSe102 (Family Myoviridae, Subfamily Ounavirinae), with a Very High Degree of Similarity

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Nikolay V. Volozhantsev ◽  
Egor A. Denisenko ◽  
Angelina A. Kislichkina ◽  
Vera P. Myakinina ◽  
Valentina M. Krasilnikova ◽  
...  
Keyword(s):  
Broad Spectrum ◽  
Complete Genome ◽  
Genome Sequences ◽  
Coding Sequences ◽  
Content Type ◽  
Double Stranded Dna ◽  
Poultry Farms ◽  
High Degree ◽  
Degree Of Similarity ◽  
Very High

ABSTRACT Two lytic double-stranded DNA bacteriophages, VSe11 and VSe102, infecting broad-spectrum Salmonella enterica were isolated from the sewage of two different poultry farms. The phage genomes comprise 86,360 bp and 86,365 bp, respectively, with a G+C content of 39.0%, and both contain 129 putative coding sequences.

scholarly journals Complete Genome Sequences of Bacillus Phages Janet and OTooleKemple52

2018 ◽  
Vol 6 (19) ◽  
pp. e00083-18
Author(s):  
Brenna Kent ◽  
Thomas Raymond ◽  
Philip D. Mosier ◽  
Allison A. Johnson
Keyword(s):  
Bacillus Cereus ◽  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Host Preferences ◽  
Content Type ◽  
Sequence Identity ◽  
Double Stranded Dna ◽  
High Degree

ABSTRACT We report here the genome sequences of two novel Bacillus cereus group-infecting bacteriophages, Janet and OTooleKemple52. These bacteriophages are double-stranded DNA-containing Myoviridae isolated from soil samples. While their genomes share a high degree of sequence identity with one another, their host preferences are unique.

scholarly journals Complete Genome Sequences of Bacteriocin-Producing Streptococcus thermophilus Strains ST106 and ST109

2019 ◽  
Vol 8 (7) ◽  
Author(s):  
John A. Renye ◽  
David S. Needleman ◽  
Dennis H. Steinberg
Keyword(s):  
Gene Cluster ◽  
Broad Spectrum ◽  
Complete Genome ◽  
Streptococcus Thermophilus ◽  
Genome Sequences ◽  
Content Type

Streptococcus thermophilus strains ST106 and ST109 produce broad-spectrum bacteriocins encoded within a bacteriocin-like peptide (blp) gene cluster. This study reports the complete genome sequences for both strains, with the ST109 chromosome containing 1,788,866 nucleotides (nt) and 1,572 predicted genes, and ST106 having 1,856,083 nt and 1,601 predicted genes.

scholarly journals Complete Genome Sequences of 10 Phages Lytic against Multidrug-Resistant Pseudomonas aeruginosa

2020 ◽  
Vol 9 (29) ◽  
Author(s):  
Jason Farlow ◽  
Helen R. Freyberger ◽  
Yunxiu He ◽  
Amanda M. Ward ◽  
Wiriya Rutvisuttinunt ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Complete Genome ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Coding Sequences ◽  
Content Type

ABSTRACT We report the genome sequences of 10 Pseudomonas aeruginosa phages studied for their potential for formulation of a therapeutic cocktail; they represent the families Myoviridae, Podoviridae, and Siphoviridae. Genome sizes ranged from 43,299 to 88,728 nucleotides, with G+C contents of 52.1% to 62.2%. The genomes contained 68 to 168 coding sequences.

scholarly journals Genome Sequences of Listeria Phages Induced from Lysogenic Isolates of Listeria monocytogenes from Seafood and a Seafood Processing Environment in Thailand

2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Hue Thi Kim Vu ◽  
Matthew J. Stasiewicz ◽  
Soottawat Benjakul ◽  
Kitiya Vongkamjan
Keyword(s):  
Listeria Monocytogenes ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Double Stranded Dna ◽  
Seafood Processing

We report here the complete genome sequences of three Listeria phages (PSU-VKH-LP019, PSU-VKH-LP040, and PSU-VKH-LP041), which were newly induced from lysogenic isolates of Listeria monocytogenes from seafood and a seafood processing environment in Thailand. The three phages show circularly permuted double-stranded DNA genomes with sizes of 38.6, 39.6, and 48.3 kb.

scholarly journals Complete Genome Sequences of Two Staphylococcus saccharolyticus Strains Isolated from Prosthetic Joint Infections

2021 ◽  
Vol 10 (10) ◽  
Author(s):  
Mastaneh Afshar ◽  
Anja Poehlein ◽  
Bo Söderquist ◽  
Holger Brüggemann
Keyword(s):  
Human Skin ◽  
Complete Genome ◽  
Genome Sequences ◽  
Coding Sequences ◽  
Content Type ◽  
Reductive Evolution ◽  
Joint Infections ◽  
Prosthetic Joint ◽  
Prosthetic Joint Infections ◽  
Skin Bacterium

ABSTRACT Staphylococcus saccharolyticus is a human skin bacterium and is occasionally associated with prosthetic joint infections (PJIs). Here, we report the complete genome sequences of two strains that were isolated from shoulder and hip PJIs. The genomes show signs of reductive evolution; around 21% of all coding sequences are inactivated by frameshift mutations.

scholarly journals Sequence Analysis of a Jumbo Bacteriophage, Xoo-sp14, That Infects Xanthomonas oryzae pv. oryzae

2020 ◽  
Vol 9 (48) ◽  
Author(s):  
Amina Nazir ◽  
Zhaoxia Dong ◽  
Jin Liu ◽  
Xianglilan Zhang ◽  
Rana Adnan Tahir ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Xanthomonas Oryzae ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Dsdna Molecule ◽  
Double Stranded Dna

ABSTRACT A jumbo bacteriophage, Xoo-sp14, infecting Xanthomonas oryzae pv. oryzae was isolated from rice fields in China. Here, we report the complete genome sequence of this phage, revealing that it had a linear double-stranded DNA (dsDNA) molecule 232,104 bp long, with a G+C content of 58%. It has 251 annotated protein-coding sequences.

scholarly journals Complete Genome Sequences of Three phi29-Like Bacillus cereus Group Podoviridae

2017 ◽  
Vol 5 (29) ◽  
Author(s):  
Ivan Erill ◽  
Steven M. Caruso
Keyword(s):  
Bacillus Cereus ◽  
Complete Genome ◽  
Genome Sequences ◽  
Bacillus Cereus Group ◽  
Content Type ◽  
Double Stranded Dna

ABSTRACT Three double-stranded DNA phi29-like Bacillus cereus group bacteriophages, BeachBum, Harambe, and SerPounce, were identified and characterized. BeachBum and Harambe are closely related but are remarkably different from previously identified phi29-like phages. SerPounce is substantially closer to other phi29-like phages, enabling the identification of its prohead RNA (pRNA) gene.

scholarly journals Complete Genome Sequences of Mycobacteriophages Apex and Gophee

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Denzel Edwards ◽  
Tara Carney ◽  
Yunia Alvarez ◽  
Justin Pagan ◽  
Emma Sarro ◽  
...  
Keyword(s):  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Double Stranded Dna

ABSTRACT Apex and Gophee are mycobacteriophages directly isolated from soil using the host Mycobacterium smegmatis mc2155. Apex has a 71,244-bp double-stranded DNA (dsDNA) genome encoding 98 putative proteins, and Gophee has a 68,556-bp dsDNA genome encoding 101 putative proteins.

scholarly journals Complete Genome Sequence of Weissella cibaria Strain BM2, Isolated from Korean Kimchi

2020 ◽  
Vol 9 (34) ◽  
Author(s):  
Jang-In Shin ◽  
Sang Gi Oh ◽  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Broad Spectrum ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Health Benefits ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Weissella Cibaria

ABSTRACT Weissella cibaria appears to have broad-spectrum health benefits. Here, we report the genome sequence of Weissella cibaria strain BM2, which was isolated from homemade kimchi; it consists of one circular chromosome of 2,462,443 bp and one plasmid of 11,067 bp. A total of 2,337 coding sequences were predicted, including 2,117 protein-coding sequences and a G+C content of 45.06%.

scholarly journals Complete Genome Sequences of Six BI Cluster Streptomyces Bacteriophages, HotFries, Moozy, Rainydai, RavenPuff, Scap1, and SenditCS

2018 ◽  
Vol 7 (12) ◽  
Author(s):  
Devin Blocker ◽  
Matthew Koert ◽  
Courtney Mattson ◽  
Harsh Patel ◽  
Priya Patel ◽  
...  
Keyword(s):  
Complete Genome ◽  
Genomic Analysis ◽  
Genome Sequences ◽  
Content Type ◽  
Double Stranded Dna ◽  
Streptomyces Scabiei

Six double-stranded DNA Streptomyces bacteriophages, HotFries, Moozy, RavenPuff, Scap1, Rainydai, and SenditCS, were isolated using the phytopathogen Streptomyces scabiei as a host. These phages have been identified as Siphoviridae and members of cluster BI by genomic analysis.

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