scholarly journals Draft Genome Sequences of Bifidobacterium Strains Isolated from Dietary Supplements and Cultured Food Products

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Tammy J. Barnaba ◽  
Jayanthi Gangiredla ◽  
Mark K. Mammel ◽  
David W. Lacher ◽  
Christopher A. Elkins ◽  
...  
Keyword(s):  
Gastrointestinal Tract ◽  
Dietary Supplements ◽  
Draft Genome ◽  
Food Products ◽  
Genome Sequences ◽  
Content Type

Here, we present the genome sequences of 23 Bifidobacterium isolates from several commercially available dietary supplements and cultured food products. Strains of this genus are natural inhabitants of the mammalian mouth, gastrointestinal tract, and vagina.

scholarly journals Draft Genome Sequences of Two Fusobacterium necrophorum Strains Isolated from the Uterus of Dairy Cows with Metritis

2019 ◽  
Vol 8 (17) ◽  
Author(s):  
Amye M. Francis ◽  
Soo Jin Jeon ◽  
Federico Cunha ◽  
KwangCheol Casey Jeong ◽  
Klibs N. Galvão
Keyword(s):  
Gastrointestinal Tract ◽  
Dairy Cows ◽  
Draft Genome ◽  
Fusobacterium Necrophorum ◽  
Foot Rot ◽  
Genome Sequences ◽  
Comparative Genome ◽  
Content Type

A commensal in the gastrointestinal tract, Fusobacterium necrophorum is involved in the pathogenicity of abscesses, foot rot, and metritis in cattle. Here, we present the draft genomes of two Fusobacterium necrophorum isolates from the uterus of dairy cows with metritis to allow for future comparative genome studies.

scholarly journals Draft Genome Sequence of Bifidobacterium longum subsp. infantis BI-G201, a Commercialization Strain

2020 ◽  
Vol 9 (47) ◽  
Author(s):  
Jinan Song ◽  
Yu Xu ◽  
Di Han ◽  
Qihui Teng ◽  
Deyi Jiang ◽  
...  
Keyword(s):  
Dietary Supplements ◽  
Genome Sequence ◽  
Bifidobacterium Longum ◽  
Draft Genome ◽  
Food Products ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Bifidobacterium longum subsp. infantis has been widely used in many food products such as solid beverages and dietary supplements. Here, a draft genome sequence of a commercialization strain, Bifidobacterium longum subsp. infantis BI-G201, is reported.

scholarly journals Draft Genome Sequences of 43 Lactobacillus Strains from the Species L. curvatus, L. fermentum, L. paracasei, L. plantarum, L. rhamnosus, and L. sakei, Isolated from Food Products

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Raffael C. Inglin ◽  
Leo Meile ◽  
Marc J. A. Stevens
Keyword(s):  
Draft Genome ◽  
Food Products ◽  
Illumina Miseq ◽  
Genome Sequences ◽  
Content Type

ABSTRACT The genome sequences of 43 Lactobacillus strains from the species L. curvatus, L. fermentum, L. paracasei, L. plantarum, L. rhamnosus, and L. sakei were determined using Illumina MiSeq.

scholarly journals Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from 22 Commercial Dietary Supplements

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Jayanthi Gangiredla ◽  
Tammy J. Barnaba ◽  
Mark K. Mammel ◽  
David W. Lacher ◽  
Christopher A. Elkins ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Dietary Supplements ◽  
Draft Genome ◽  
Lactobacillus Species ◽  
Genome Sequences ◽  
Content Type ◽  
The U.S

Here, we present the genome sequences of 56 isolates of 10 species of the genus Lactobacillus that are considered beneficial components of the gut microbiota. The isolates examined were found in commercially available dietary supplements in the U.S.

scholarly journals Draft Genome Sequences of 81 Salmonella enterica Strains from Informal Markets in Cambodia

2020 ◽  
Vol 9 (36) ◽  
Author(s):  
Carla L. Schwan ◽  
Valentina Trinetta ◽  
Maria Balkey ◽  
Peter W. Cook ◽  
Randall K. Phebus ◽  
...  
Keyword(s):  
Salmonella Enterica ◽  
Draft Genome ◽  
Food Products ◽  
Southeast Asian ◽  
Cross Contamination ◽  
Informal Markets ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Salmonella enterica is an important global pathogen due to its contribution to human morbidity and death. The presence of S. enterica in Southeast Asian informal markets is amplified by cross-contamination between market surfaces and food products. Here, we describe the draft genome sequences of 81 Salmonella enterica isolates from informal markets in Cambodia.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals First Draft Genome Sequences of Malaysian Clinical Isolates of Corynebacterium diphtheriae

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Norazah Ahmad ◽  
Shirley Yi Fen Hii ◽  
Mohd Khairul Nizam Mohd Khalid ◽  
Muhammad Adib Abd Wahab ◽  
Rohaidah Hashim ◽  
...  
Keyword(s):  
Draft Genome ◽  
Corynebacterium Diphtheriae ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Corynebacterium diphtheriae has caused multiple isolated diphtheria cases in Malaysia over the years. Here, we report the first draft genome sequences of 15 Malaysia C. diphtheriae clinical isolates collected from the years 1981 to 2016.

scholarly journals Draft Genome Sequences of Historical Strains of Coxiella burnetii Isolated from Cow’s Milk and a Goat Placenta

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Paul A. Beare ◽  
Brendan M. Jeffrey ◽  
Craig A. Martens ◽  
Talima Pearson ◽  
Robert A. Heinzen
Keyword(s):  
Coxiella Burnetii ◽  
Draft Genome ◽  
Sequence Type ◽  
Cow’S Milk ◽  
Genome Sequences ◽  
Content Type ◽  
Cow's Milk

ABSTRACT Here, we report draft genome sequences of historical strains of Coxiella burnetii derived from cow’s milk and the placenta of a goat that had aborted. The California and Ohio milk strains display a different sequence type than do contemporary milk strains.

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