scholarly journals Draft Genome Sequence of Corynebacterium amycolatum Strain ICIS 53 Isolated from a Female Urogenital Tract

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Irina V. Gladysheva ◽  
Sergey V. Cherkasov ◽  
Yuriy A. Khlopko ◽  
Andrey O. Plotnikov ◽  
Natalya E. Gogoleva
Keyword(s):  
Genome Sequence ◽  
Reproductive Tract ◽  
Draft Genome ◽  
Healthy Woman ◽  
Urogenital Tract ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Annotation

This report describes the draft genome sequence of Corynebacterium amycolatum strain ICIS 53, isolated from the reproductive tract of a healthy woman. The size of the genome was 2,460,257 bp (58.98% G+C content). Annotation revealed 2,173 coding sequences, including 2,076 proteins, 7 rRNA genes, and 53 tRNA genes.

scholarly journals Draft Genome Sequence of Limisphaera ngatamarikiensis NGM72.4T, a Moderately Alkaliphilic Thermophile Belonging to the Class Verrucomicrobiae

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Carlo R. Carere ◽  
Jason A. Steen ◽  
Philip Hugenholtz ◽  
Matthew B. Stott
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Illumina Hiseq ◽  
Coding Sequences ◽  
Content Type ◽  
Aotearoa New Zealand

Limisphaera ngatamarikiensis NGM72.4T is a thermophilic representative of the class Verrucomicrobiae. Isolated from geothermally heated subaqueous clay sediments from a Ngatamariki hotspring in Aotearoa New Zealand, the 3,908,748-bp genome was sequenced using the Illumina HiSeq 2500 platform. Annotation revealed 3,083 coding sequences, including 3,031 proteins, 3 rRNA genes, and 46 tRNA genes.

scholarly journals Draft Genome Sequence of Corynebacterium ulcerans Strain 04-3911, Isolated from Humans

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adooney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Pathogenic Bacterium ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Domesticated Animals ◽  
Corynebacterium Ulcerans ◽  
The World

Corynebacterium ulcerans is a pathogenic bacterium infecting wild and domesticated animals; some infection cases in humans have increased throughout the world. The current study describes the draft genome of strain 04-3911, isolated from humans. The draft genome has 2,492,680 bp, 2,143 coding sequences, 12 rRNA genes, and 50 tRNA genes.

scholarly journals Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 04-7514, Isolated from a Dog in France

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adooney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Corynebacterium Ulcerans ◽  
Crispr Array ◽  
Short Palindromic Repeat

Here, we present the draft genome of toxigenic Corynebacterium ulcerans strain 04-7514. The draft genome has 2,497,845 bp, 2,059 coding sequences, 12 rRNA genes, 46 tRNA genes, 150 pseudogenes, 1 clustered regularly interspaced short palindromic repeat (CRISPR) array, and a G+C content of 53.50%.

scholarly journals Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 03-8664 Isolated from a Human Throat

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adonney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Coding Sequences ◽  
Domesticated Animals ◽  
Zoonotic Infections ◽  
Corynebacterium Ulcerans ◽  
Emergent Pathogen

Corynebacterium ulcerans is an emergent pathogen infecting wild and domesticated animals worldwide that may serve as reservoirs for zoonotic infections. In this study, we present the draft genome of C. ulcerans strain 03-8664. The draft genome has 2,428,683 bp, 2,262 coding sequences, and 12 rRNA genes.

scholarly journals Draft Genome Sequence of Larkinella sp. Strain BK230, Isolated from Populus deltoides Roots

2020 ◽  
Vol 9 (12) ◽  
Author(s):  
Dale A. Pelletier ◽  
Leah H. Burdick ◽  
Mircea Podar ◽  
Christopher W. Schadt ◽  
Udaya C. Kalluri
Keyword(s):  
Genome Sequence ◽  
Populus Deltoides ◽  
Heterotrophic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Type ◽  
Eastern Cottonwood

Larkinella sp. strain BK230, a heterotrophic bacterium of the phylum Bacteroidetes, was isolated from the roots of a field-grown eastern cottonwood tree (Populus deltoides) located in Georgia. The draft 7.27-Mb genome has a G+C content of 53.4% and contains 6,026 coding sequences, including 41 tRNA genes.

scholarly journals Draft Genome Sequence of the Extremely Desiccation-Tolerant Cyanobacterium Gloeocapsopsis sp. Strain AAB1

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Fernando Puente-Sánchez ◽  
Carlos González-Silva ◽  
Victor Parro ◽  
Javier Tamames ◽  
Armando Azua-Bustos
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Atacama Desert ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Content Type

ABSTRACT Gloeocapsopsis sp. strain AAB1 is an extremely desiccation-tolerant cyanobacterium isolated from translucent quartz stones from the Atacama Desert (Chile). Here, we report its draft genome sequence, which consists of 137 contigs with an ∼5.4-Mb genome size. The annotation revealed 5,641 coding DNA sequences, 38 tRNA genes, and 5 rRNA genes.

scholarly journals Draft Genome Sequence of a Pseudomonas sp. Strain Carrying bla IMP-25 and bla VIM-2 Carbapenemase Genes from Hospital Sewage

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Yiyi Hu ◽  
Wenjing Wu ◽  
Yu Feng ◽  
Xiaoxia Zhang ◽  
Zhiyong Zong
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Pseudomonas Sp ◽  
West China Hospital ◽  
Coding Sequences ◽  
West China ◽  
Hospital Sewage

Pseudomonas strain WCHP16 recovered from hospital sewage in West China Hospital, Chengdu, China was found to carry two carbapenemase genes bla IMP-25 and bla VIM-2 . Here, we report its 5.7-Mb draft genome sequence, comprising 141 contigs and an average 59.53% G+C content. The genome contained 5,504 coding sequences and 67 tRNA genes.

scholarly journals Draft Genome Sequence of a High-Level Colistin-Resistant Clinical Strain of the Enterobacter cloacae Complex

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Ji Lin ◽  
Feifei Zhao ◽  
Yu Feng ◽  
Zhiyong Zong
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Enterobacter Cloacae ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Type ◽  
High Level ◽  
Enterobacter Cloacae Complex

ABSTRACT Strain WCHECl-C4 of the Enterobacter cloacae complex, recovered from the blood of a patient with peritonitis, was high-level resistant to colistin. Here, we report its 5.1-Mb draft genome sequence, comprising 92 contigs with an average 55.74% G+C content. The genome contained 4,783 coding sequences and 68 tRNA genes.

scholarly journals Genome Sequence Data of Lactobacillus ruminis ICIS-540, Isolated from the Intestine of a Healthy Woman

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Elena V. Ivanova ◽  
Anastasia V. Bekpergenova ◽  
Natalia B. Perunova ◽  
Sergey V. Andryuschenko ◽  
Taisia A. Bondarenko ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Sequence Data ◽  
Draft Genome ◽  
Healthy Woman ◽  
Human Colon ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Lactobacillus Ruminis

ABSTRACT Data on the draft genome sequence of Lactobacillus ruminis ICIS-540 are presented in this report. This Lactobacillus strain was isolated from the human colon as a prospective probiotic candidate. The genome size was 2,397,517 bp (G+C content, 42.7%). Annotation revealed 2,847 coding sequences, including 2,573 proteins.

scholarly journals Draft Genome Sequence of Bacillus pacificus KVCMST-8A-12, Isolated from a Marine Sediment Sample from the Kanyakumari Coast, India

2021 ◽  
Vol 10 (50) ◽  
Author(s):  
Asha Santhi ◽  
Venkatesh Subramanian ◽  
Krishnaveni Muthan
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Content Type ◽  
Marine Sediment Sample

A DNase-producing Bacillus pacificus strain was isolated, and the whole-genome sequence is reported in this paper. The draft genome sequence of Bacillus pacificus KVCMST-8A-12 constitutes 2.4 Gbp of raw reads, with a GC content of 35.24%. In total, 5,661 protein-coding genes, 64 tRNA genes, and 4 rRNA genes were predicted.

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