scholarly journals Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 03-8664 Isolated from a Human Throat

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adonney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Coding Sequences ◽  
Domesticated Animals ◽  
Zoonotic Infections ◽  
Corynebacterium Ulcerans ◽  
Emergent Pathogen

Corynebacterium ulcerans is an emergent pathogen infecting wild and domesticated animals worldwide that may serve as reservoirs for zoonotic infections. In this study, we present the draft genome of C. ulcerans strain 03-8664. The draft genome has 2,428,683 bp, 2,262 coding sequences, and 12 rRNA genes.

scholarly journals Draft Genome Sequence of Corynebacterium ulcerans Strain 04-3911, Isolated from Humans

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adooney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Pathogenic Bacterium ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Domesticated Animals ◽  
Corynebacterium Ulcerans ◽  
The World

Corynebacterium ulcerans is a pathogenic bacterium infecting wild and domesticated animals; some infection cases in humans have increased throughout the world. The current study describes the draft genome of strain 04-3911, isolated from humans. The draft genome has 2,492,680 bp, 2,143 coding sequences, 12 rRNA genes, and 50 tRNA genes.

scholarly journals Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 04-7514, Isolated from a Dog in France

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Luis C. Guimarães ◽  
Marcus V. C. Viana ◽  
Leandro J. Benevides ◽  
Diego C. B. Mariano ◽  
Adooney A. O. Veras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Corynebacterium Ulcerans ◽  
Crispr Array ◽  
Short Palindromic Repeat

Here, we present the draft genome of toxigenic Corynebacterium ulcerans strain 04-7514. The draft genome has 2,497,845 bp, 2,059 coding sequences, 12 rRNA genes, 46 tRNA genes, 150 pseudogenes, 1 clustered regularly interspaced short palindromic repeat (CRISPR) array, and a G+C content of 53.50%.

scholarly journals Draft Genome Sequence of Limisphaera ngatamarikiensis NGM72.4T, a Moderately Alkaliphilic Thermophile Belonging to the Class Verrucomicrobiae

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Carlo R. Carere ◽  
Jason A. Steen ◽  
Philip Hugenholtz ◽  
Matthew B. Stott
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Illumina Hiseq ◽  
Coding Sequences ◽  
Content Type ◽  
Aotearoa New Zealand

Limisphaera ngatamarikiensis NGM72.4T is a thermophilic representative of the class Verrucomicrobiae. Isolated from geothermally heated subaqueous clay sediments from a Ngatamariki hotspring in Aotearoa New Zealand, the 3,908,748-bp genome was sequenced using the Illumina HiSeq 2500 platform. Annotation revealed 3,083 coding sequences, including 3,031 proteins, 3 rRNA genes, and 46 tRNA genes.

scholarly journals Draft Genome Sequence of Klebsiella pneumoniae AWD5

2017 ◽  
Vol 5 (5) ◽  
Author(s):  
Jina Rajkumari ◽  
L. Paikhomba Singha ◽  
Piyush Pandey
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Polyaromatic Hydrocarbon ◽  
Coding Sequences ◽  
Content Type ◽  
Benzoate Degradation

ABSTRACT Here, we report the draft genome sequence of Klebsiella pneumoniae strain AWD5, isolated from an automobile workshop in India. The de novo assembly resulted in a 4,807,409 bp genome containing 25 rRNA genes, 81 tRNAs, and 4,636 coding sequences (CDS). It carries important genes for polyaromatic hydrocarbon degradation and benzoate degradation.

scholarly journals Draft Genome Sequence of Corynebacterium amycolatum Strain ICIS 53 Isolated from a Female Urogenital Tract

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Irina V. Gladysheva ◽  
Sergey V. Cherkasov ◽  
Yuriy A. Khlopko ◽  
Andrey O. Plotnikov ◽  
Natalya E. Gogoleva
Keyword(s):  
Genome Sequence ◽  
Reproductive Tract ◽  
Draft Genome ◽  
Healthy Woman ◽  
Urogenital Tract ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Annotation

This report describes the draft genome sequence of Corynebacterium amycolatum strain ICIS 53, isolated from the reproductive tract of a healthy woman. The size of the genome was 2,460,257 bp (58.98% G+C content). Annotation revealed 2,173 coding sequences, including 2,076 proteins, 7 rRNA genes, and 53 tRNA genes.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of Hydrocarbon-Degrading Staphylococcus saprophyticus Strain CNV2, Isolated from Crude Oil-Contaminated Soil from the Noonmati Oil Refinery, Guwahati, Assam, India

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Arghya Mukherjee ◽  
Bobby Chettri ◽  
James S. Langpoklakpam ◽  
Arvind K. Singh ◽  
Dhrubajyoti Chattopadhyay
Keyword(s):  
Crude Oil ◽  
Genome Sequence ◽  
Contaminated Soil ◽  
Draft Genome ◽  
Oil Refinery ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
First Report ◽  
Staphylococcus Saprophyticus

Here, we report the 2.6 Mb draft genome sequence of hydrocarbon-degrading Staphylococcus saprophyticus strain CNV2, isolated from oil-contaminated soil in Guwahati, India. CNV2 contains 2,545 coding sequences and has a G+C content of 33.2%. This is the first report of the genome sequence of an S. saprophyticus adapted to an oil-contaminated environment.

scholarly journals Draft Genome Sequence of Leifsonia xyli subsp. xyli Strain gdw1

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Jihua Wang ◽  
Li Wang ◽  
Gan Cao ◽  
Muqing Zhang ◽  
Ying Guo
Keyword(s):  
Genome Sequence ◽  
Genetic Improvement ◽  
De Novo ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Ratoon Stunting Disease

Here, we report the draft genome sequence of Leifsonia xyli subsp. xyli strain gdw1, isolated from the stem of Badila sugarcane located at the Guangdong Key Laboratory for Crops Genetic Improvement (Guanzhou, China), that causes ratoon stunting disease of sugarcane. The de novo genome of Leifsonia xyli subsp. xyli was assembled with 48 scaffolds and a G+C content of 67.68%, and contained 2.6 Mb bp and 2,838 coding sequences.

scholarly journals Draft Genome Sequence of Enterococcus faecalis DD14, a Bacteriocinogenic Lactic Acid Bacterium with Anti-Clostridium Activity

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Yanath Belguesmia ◽  
Valérie Leclère ◽  
Matthieu Duban ◽  
Eric Auclair ◽  
Djamel Drider
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Gram Positive Bacteria ◽  
Healthy Newborn

ABSTRACT We report the draft genome sequence of Enterococcus faecalis DD14, a strain isolated from meconium of a healthy newborn at Roubaix Hospital (France). The strain displayed antagonism against a set of Gram-positive bacteria through concomitant production of lactic acid and bacteriocin. The genome has a size of 2,893,365 bp and a 37.3% G+C ratio and is predicted to contain at least 2,755 coding sequences and 62 RNAs.

scholarly journals Genome Sequence of Rheinheimera salexigens sp. nov. Isolated from a Fishing Hook off O‘ahu, Hawai‘i

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Xuehua Wan ◽  
Shaobin Hou ◽  
Kazukuni Hayashi ◽  
James Anderson ◽  
Stuart P. Donachie
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Coding Regions ◽  
Roche 454

Rheinheimera salexigens KH87 T is an obligately halophilic gammaproteobacterium. The strain’s draft genome sequence, generated by the Roche 454 GS FLX+ platform, comprises two scaffolds of ~3.4 Mbp and ~3 kbp, with 3,030 protein-coding sequences and 58 tRNA coding regions. The G+C content is 42 mol%.

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