scholarly journals Draft Genome Sequence of Actinomyces massiliensis Strain 4401292T

2012 ◽  
Vol 194 (18) ◽  
pp. 5121-5121 ◽  
Author(s):  
Véronique Roux ◽  
Catherine Robert ◽  
Grégory Gimenez ◽  
Reem Gharbi ◽  
Didier Raoult
Keyword(s):  
Blood Culture ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Insertion Sequences ◽  
Content Type ◽  
Associated Proteins

ABSTRACTA draft genome sequence ofActinomyces massiliensis, an anaerobic bacterium isolated from a patient's blood culture, is described here. CRISPR-associated proteins, insertion sequences, and toxin-antitoxin loci were found on the genome.

scholarly journals Draft Genome Sequences of Actinomyces timonensis Strain 7400942Tand Its Prophage

2012 ◽  
Vol 194 (23) ◽  
pp. 6613-6614 ◽  
Author(s):  
Aurore Gorlas ◽  
Grégory Gimenez ◽  
Didier Raoult ◽  
Véronique Roux
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Insertion Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Genome Sequences ◽  
Content Type ◽  
Associated Proteins

ABSTRACTA draft genome sequence ofActinomyces timonensis, an anaerobic bacterium isolated from a human clinical osteoarticular sample, is described here. CRISPR-associated proteins, insertion sequence, and toxin-antitoxin loci were found on the genome. A new virus or provirus, AT-1, was characterized.

scholarly journals Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Mamitina Alain Noah Rabenandrasana ◽  
Lala Fanomezantsoa Rafetrarivony ◽  
Lalainasoa Odile Rivoarilala ◽  
Vincent Enouf ◽  
Annick Lalaina Robinson ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Blood Culture ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Chryseobacterium Indologenes

We report here the draft genome sequence of a Chryseobacterium indologenes strain, isolated from a blood culture of a 2.2-year-old child admitted to the hospital for vomiting and coughing. The genome was composed of 5,063,674 bp and had 37.04% GC content. We detected 4,796 genes with predicted protein-coding functions, including those associated with antibiotic resistance.

scholarly journals Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Tim Böer ◽  
Kerrin Steensen ◽  
Rolf Daniel
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Obligate Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT The spore-forming, thermophilic, and obligate anaerobic bacterium Moorella stamsii was isolated from digester sludge. Apart from its ability to use carbon monoxide for growth, M. stamsii harbors several enzymes for the use of different sugars. The draft genome has a size of 3,329 Mb and contains 3,306 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence of Lactobacillus paracasei DmW181, a Bacterium Isolated from Wild Drosophila

2017 ◽  
Vol 5 (27) ◽  
Author(s):  
Austin J. Hammer ◽  
Amber Walters ◽  
Courtney Carroll ◽  
Peter D. Newell ◽  
John M. Chaston
Keyword(s):  
Sialic Acid ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Lactobacillus Paracasei ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Mannose Metabolism

ABSTRACT The draft genome sequence of Lactobacillus paracasei DmW181, an anaerobic bacterium isolate from wild Drosophila flies, is reported here. Strain DmW181 possesses genes for sialic acid and mannose metabolism. The assembled genome is 3,201,429 bp, with 3,454 predicted genes.

scholarly journals Draft Genome Sequence of a Metronidazole-Resistant Bacteroides fragilis Strain Isolated in Ecuador

2019 ◽  
Vol 8 (49) ◽  
Author(s):  
Jeannete Zurita ◽  
Gabriela Sevillano ◽  
Ariane Paz y Miño ◽  
Francisco Flores ◽  
Marcela Bovera
Keyword(s):  
Blood Culture ◽  
Genome Sequence ◽  
Draft Genome ◽  
Bacteroides Fragilis ◽  
Resistant Bacterium ◽  
Draft Genome Sequence ◽  
Medical Institution ◽  
Content Type ◽  
Metronidazole Resistance ◽  
New Variant

Here, we report the draft genome sequence of Bacteroides fragilis strain Z&Z143, a metronidazole-resistant bacterium isolated from a blood culture from an Ecuadorian patient hospitalized in a medical institution in Quito, Ecuador. We describe a new variant of the nim genes, which is associated with metronidazole resistance.

scholarly journals Draft Genome Sequence of Thermaerobacter sp. Strain PB12/4term, a Thermophilic Facultative Anaerobic Bacterium from Bottom Sediments of Lake Baikal, Russia

2018 ◽  
Vol 7 (20) ◽  
Author(s):  
Olga A. Baturina ◽  
Olga N. Pavlova ◽  
Angelina S. Novikova ◽  
Marsel R. Kabilov ◽  
Tamara I. Zemskaya
Keyword(s):  
Lake Baikal ◽  
Genome Sequence ◽  
Bottom Sediments ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Discharge Zone ◽  
Content Type ◽  
Facultative Anaerobic ◽  
Gas Bearing

Here, we report the draft genome sequence of Thermaerobacter sp. strain PB12/4term, a thermophilic facultative anaerobic bacterium from the bottom sediments of Lake Baikal, Russia, associated with the discharge zone of gas-bearing fluids.

scholarly journals Draft Genome Sequence of Mycolicibacterium sp. Strain NCC-Tsukiji, Isolated from Blood Culture of a Patient with Malignant Lymphoma

2019 ◽  
Vol 8 (14) ◽  
Author(s):  
Hanako Fukano ◽  
Mitsunori Yoshida ◽  
Michi Shouji ◽  
Shunsuke Hatta ◽  
Dai Maruyama ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Blood Culture ◽  
Malignant Lymphoma ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Multilocus Sequence Analysis ◽  
Lymphoma Patient ◽  
Content Type

A nonidentifiable mycolicibacterium was isolated from a malignant lymphoma patient treated with intensive chemoimmunotherapy. Multilocus sequence analysis showed that this isolate was close to “Mycolicibacterium (Mycobacterium) ratisbonense,” but the details of this species were still unknown.

scholarly journals Draft Genome Sequence of Azospira sp. Strain I13, a Nitrous Oxide-Reducing Bacterium Harboring Clade II Type nosZ

2018 ◽  
Vol 6 (20) ◽  
Author(s):  
Toshikazu Suenaga ◽  
Tomo Aoyagi ◽  
Masaaki Hosomi ◽  
Tomoyuki Hori ◽  
Akihiko Terada
Keyword(s):  
Nitrous Oxide ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Facultative Anaerobic ◽  
The Way

ABSTRACT We report here a draft genome sequence of Azospira sp. strain I13 in the class Betaproteobacteria, a facultative anaerobic bacterium responsible for nitrous oxide (N2O) reduction. Deciphering this genome would pave the way for the use of Azospira sp. strain I13 to facilitate N2O consumption in a nitrogen-removing bioreactor emitting N2O.

scholarly journals Draft Genome Sequence of Candida pseudohaemulonii Isolated from the Blood of a Neutropenic Patient

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
Ratna Mohd Tap ◽  
Nur Amalina Kamarudin ◽  
Stephanie Jane Ginsapu ◽  
Ahmed Rafezzan Ahmed Bakri ◽  
Norazah Ahmad ◽  
...  
Keyword(s):  
Blood Culture ◽  
Amphotericin B ◽  
Genome Sequence ◽  
Neutropenic Patient ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Candida pseudohaemulonii is phylogenetically close to the C. haemulonii complex and exhibits resistance to amphotericin B and azole agents. We report here the draft genome sequence of C. pseudohaemulonii UZ153_17 isolated from the blood culture of a neutropenic patient. The draft genome is 3,532,003,666 bp in length, with 579,838 reads, 130 contigs, and a G+C content of 47.15%.

scholarly journals Draft Genome Sequence of Lactobacillus mulieris UMB9245, Isolated from the Female Bladder

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Lidia Ramotowski ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Genome Length ◽  
Vaginal Infections ◽  
Content Type ◽  
Lactobacillus Jensenii ◽  
A Genome ◽  
Female Bladder

Lactobacillus jensenii is an anaerobic bacterium found in the urogenital tract that is known to prevent common vaginal infections. Recently, it was divided into two species, L. jensenii and L. mulieris. Here, we report the draft genome sequence of L. mulieris UMB9245, with a genome length of 1,723,383 bp assembled into 52 contigs.

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