scholarly journals Complete Genome Sequence of Sporomusa termitida DSM 4440T

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Anja Poehlein ◽  
Jacqueline Hollensteiner ◽  
Annika Dreyer ◽  
Ivana Gavrilova ◽  
Rolf Daniel
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Intestinal Content ◽  
Circular Chromosome ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

Sporomusa termitida type strain DSM 4440 was isolated from the intestinal content of the termite Nasutitermes nigriceps. The genome consists of one circular chromosome (5,185,220 bp) and a megaplasmid (131,121 bp) with an overall G+C content of 49.11%. It harbors 4,764 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Erina Hase ◽  
Tomomasa Maruya
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Lake Biwa ◽  
Draft Genome ◽  
Circular Chromosome ◽  
Content Type ◽  
Near Shore ◽  
Single Circular Chromosome

We isolated Pseudomonas otitidis strain MrB4 from the near-shore area of Lake Biwa in Japan and generated its complete genome sequence. MrB4 possesses a single circular chromosome of 6,089,454 bp, with ∼97% average nucleotide identity to the P. otitidis type strain MCC10330 (draft genome).

scholarly journals Complete Genome Sequence of Pseudomonas balearica Strain EC28, an Iron-Oxidizing Bacterium Isolated from Corroded Steel

2020 ◽  
Vol 9 (19) ◽  
Author(s):  
Silvia J. Salgar-Chaparro ◽  
Genis Castillo-Villamizar ◽  
Anja Poehlein ◽  
Rolf Daniel ◽  
Laura L. Machuca
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes ◽  
Pseudomonas Balearica

Pseudomonas balearica strain EC28 is an iron-oxidizing bacterium isolated from corroded steel at a floating production storage and offloading facility in Australia. Here, we report its complete genome sequence, which comprises 4,642,566 bp with a GC content of 64.43%. The genome harbors 4,164 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Salmonella enterica Bacteriophage PRF-SP1

2021 ◽  
Vol 10 (47) ◽  
Author(s):  
Prasanna Mutusamy ◽  
Sasireigga Jaya Jothi ◽  
Su Yin Lee ◽  
Bent Petersen ◽  
Thomas Sicheritz-Ponten ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
National Park ◽  
The Novel ◽  
Content Type ◽  
Double Stranded Dna ◽  
Protein Encoding ◽  
Encoding Genes

We characterized the complete genome sequence of the lytic Salmonella enterica bacteriophage PRF-SP1, isolated from Penang National Park, a conserved rainforest in northern Malaysia. The novel phage species from the Autographiviridae family has a 39,966-bp double-stranded DNA (dsDNA) genome containing 49 protein-encoding genes and shares 90.96% similarity with Escherichia phage DY1.

scholarly journals Whole-Genome Sequence of the Ammonia-Oxidizing Bacterium Nitrosomonas stercoris Type Strain KYUHI-S, Isolated from Composted Cattle Manure

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Tatsunori Nakagawa ◽  
Yuki Tsuchiya ◽  
Reiji Takahashi
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Large Plasmid ◽  
Circular Chromosome ◽  
Content Type ◽  
Ammonia Oxidizing Bacterium

This work reports the complete genome sequence of a chemoautotrophic ammonia-oxidizing bacterium, Nitrosomonas stercoris strain KYUHI-ST (= ATCC BAA-2718T and NBRC 110753T). The assembled genome is composed of a circular chromosome and a large plasmid.

scholarly journals Complete Genome Sequence of Stenotrophomonas indicatrix DAIF1

2021 ◽  
Vol 10 (6) ◽  
Author(s):  
Ines Friedrich ◽  
Jacqueline Hollensteiner ◽  
Janna Scherf ◽  
Judith Weyergraf ◽  
Anna Klassen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
Water Protection ◽  
Content Type ◽  
Protein Encoding ◽  
Protection Area ◽  
Encoding Genes

ABSTRACT We present the complete genome of Stenotrophomonas indicatrix DAIF1, which was isolated from an oligotrophic pond in a water protection area. Whole-genome alignments indicated that strain DAIF1 belongs to the species Stenotrophomonas indicatrix. The whole genome (4,639,375 bp) harbors 4,108 protein-encoding genes, including 3,029 genes with assigned functions.

scholarly journals Complete Genome Sequence of Lactobacillus crispatus Type Strain ATCC 33820

2021 ◽  
Vol 10 (32) ◽  
Author(s):  
Lucia Teodori ◽  
Lorenzo Colombini ◽  
Anna Maria Cuppone ◽  
Elisa Lazzeri ◽  
David Pinzauti ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Gc Content ◽  
Open Reading Frames ◽  
Strain Atcc ◽  
Circular Chromosome ◽  
Content Type ◽  
Lactobacillus Crispatus

The complete genome sequence of Lactobacillus crispatus type strain ATCC 33820 was obtained by combining Nanopore and Illumina sequencing technologies. The genome consists of a 2.2-Mb circular chromosome with 2,194 open reading frames and an average GC content of 37.0%.

scholarly journals Complete Genome Sequence of Francisella halioticida Type Strain DSM 23729 (FSC1005)

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Ingrid Uneklint ◽  
Caroline Öhrman ◽  
Linda Karlsson ◽  
Mona Byström ◽  
Emil Hägglund ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Circular Chromosome ◽  
Content Type

ABSTRACT Here, we announce the complete genome sequence of the Francisella halioticida type strain DSM 23729 (FSC1005), isolated from a diseased cultured giant abalone in Japan in 2005. The genome is composed of a 2,197,430-bp-long circular chromosome, with a G+C content of 31.2%.

scholarly journals Complete Genome Sequence of Shewanella chilikensis Strain DC57, Isolated from Corroded Seal Rings at a Floating Oil Production System in Australia

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Silvia J. Salgar-Chaparro ◽  
Genis Castillo-Villamizar ◽  
Anja Poehlein ◽  
Rolf Daniel ◽  
Laura L. Machuca
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Production System ◽  
Complete Genome ◽  
Anaerobic Bacterium ◽  
Oil Production ◽  
Content Type ◽  
Facultatively Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Here, we describe the genome of Shewanella chilikensis strain DC57, a facultatively anaerobic bacterium isolated from corroded seal rings at a floating oil production system in Australia. The genome of strain DC57 has a size of 4.91 Mbp and harbors 4,178 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Collinsella aerofaciens JCM 10188T

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rrna Genes ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Content Type ◽  
Extrachromosomal Elements ◽  
Protein Encoding

We report a complete genome sequence of Collinsella aerofaciens JCM 10188T (=VPI 1003T). The genome consists of a circular chromosome (2,428,218 bp with 60.6% G+C content) and two extrachromosomal elements. The genome was predicted to contain 5 sets of rRNA genes, 58 tRNA genes, and 2,079 protein-encoding sequences.

scholarly journals Complete Genome Sequence of Bacillus subtilis BYS2, a Strain with a Broad Inhibitory Spectrum against Pathogenic Bacteria

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
Mengjiao Guo ◽  
Donghui Liu ◽  
Tongjie Chai
Keyword(s):  
Bacillus Subtilis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pathogenic Bacteria ◽  
Noncoding Rnas ◽  
Content Type ◽  
Protein Encoding ◽  
Inhibitory Spectrum ◽  
Encoding Genes

Bacillus subtilis BYS2 is a strain with a broad inhibitory spectrum against pathogenic bacteria. In the current study, we report the complete genome sequence of Bacillus subtilis BYS2. The chromosome of BYS2 (4,030,791 bp; G+C content, 43.88%) contained 3,914 protein-encoding genes, with 86 tRNAs, 30 rRNAs, and 5 noncoding RNAs (ncRNAs).

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