scholarly journals Complete Genome Sequence of Shewanella chilikensis Strain DC57, Isolated from Corroded Seal Rings at a Floating Oil Production System in Australia

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Silvia J. Salgar-Chaparro ◽  
Genis Castillo-Villamizar ◽  
Anja Poehlein ◽  
Rolf Daniel ◽  
Laura L. Machuca
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Production System ◽  
Complete Genome ◽  
Anaerobic Bacterium ◽  
Oil Production ◽  
Content Type ◽  
Facultatively Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Here, we describe the genome of Shewanella chilikensis strain DC57, a facultatively anaerobic bacterium isolated from corroded seal rings at a floating oil production system in Australia. The genome of strain DC57 has a size of 4.91 Mbp and harbors 4,178 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Pseudomonas balearica Strain EC28, an Iron-Oxidizing Bacterium Isolated from Corroded Steel

2020 ◽  
Vol 9 (19) ◽  
Author(s):  
Silvia J. Salgar-Chaparro ◽  
Genis Castillo-Villamizar ◽  
Anja Poehlein ◽  
Rolf Daniel ◽  
Laura L. Machuca
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes ◽  
Pseudomonas Balearica

Pseudomonas balearica strain EC28 is an iron-oxidizing bacterium isolated from corroded steel at a floating production storage and offloading facility in Australia. Here, we report its complete genome sequence, which comprises 4,642,566 bp with a GC content of 64.43%. The genome harbors 4,164 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Sporomusa termitida DSM 4440T

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Anja Poehlein ◽  
Jacqueline Hollensteiner ◽  
Annika Dreyer ◽  
Ivana Gavrilova ◽  
Rolf Daniel
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Intestinal Content ◽  
Circular Chromosome ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

Sporomusa termitida type strain DSM 4440 was isolated from the intestinal content of the termite Nasutitermes nigriceps. The genome consists of one circular chromosome (5,185,220 bp) and a megaplasmid (131,121 bp) with an overall G+C content of 49.11%. It harbors 4,764 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Salmonella enterica Bacteriophage PRF-SP1

2021 ◽  
Vol 10 (47) ◽  
Author(s):  
Prasanna Mutusamy ◽  
Sasireigga Jaya Jothi ◽  
Su Yin Lee ◽  
Bent Petersen ◽  
Thomas Sicheritz-Ponten ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
National Park ◽  
The Novel ◽  
Content Type ◽  
Double Stranded Dna ◽  
Protein Encoding ◽  
Encoding Genes

We characterized the complete genome sequence of the lytic Salmonella enterica bacteriophage PRF-SP1, isolated from Penang National Park, a conserved rainforest in northern Malaysia. The novel phage species from the Autographiviridae family has a 39,966-bp double-stranded DNA (dsDNA) genome containing 49 protein-encoding genes and shares 90.96% similarity with Escherichia phage DY1.

scholarly journals Complete Genome Sequence of Stenotrophomonas indicatrix DAIF1

2021 ◽  
Vol 10 (6) ◽  
Author(s):  
Ines Friedrich ◽  
Jacqueline Hollensteiner ◽  
Janna Scherf ◽  
Judith Weyergraf ◽  
Anna Klassen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
Water Protection ◽  
Content Type ◽  
Protein Encoding ◽  
Protection Area ◽  
Encoding Genes

ABSTRACT We present the complete genome of Stenotrophomonas indicatrix DAIF1, which was isolated from an oligotrophic pond in a water protection area. Whole-genome alignments indicated that strain DAIF1 belongs to the species Stenotrophomonas indicatrix. The whole genome (4,639,375 bp) harbors 4,108 protein-encoding genes, including 3,029 genes with assigned functions.

scholarly journals Complete Genome Sequence of Bacillus subtilis BYS2, a Strain with a Broad Inhibitory Spectrum against Pathogenic Bacteria

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
Mengjiao Guo ◽  
Donghui Liu ◽  
Tongjie Chai
Keyword(s):  
Bacillus Subtilis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pathogenic Bacteria ◽  
Noncoding Rnas ◽  
Content Type ◽  
Protein Encoding ◽  
Inhibitory Spectrum ◽  
Encoding Genes

Bacillus subtilis BYS2 is a strain with a broad inhibitory spectrum against pathogenic bacteria. In the current study, we report the complete genome sequence of Bacillus subtilis BYS2. The chromosome of BYS2 (4,030,791 bp; G+C content, 43.88%) contained 3,914 protein-encoding genes, with 86 tRNAs, 30 rRNAs, and 5 noncoding RNAs (ncRNAs).

scholarly journals Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Tim Böer ◽  
Kerrin Steensen ◽  
Rolf Daniel
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Obligate Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT The spore-forming, thermophilic, and obligate anaerobic bacterium Moorella stamsii was isolated from digester sludge. Apart from its ability to use carbon monoxide for growth, M. stamsii harbors several enzymes for the use of different sugars. The draft genome has a size of 3,329 Mb and contains 3,306 predicted protein-encoding genes.

scholarly journals Complete Genome Sequence of Escherichia coli Podophage Penshu1

2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Douglas Pechacek ◽  
Myung Hwangbo ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Escherichia Coli ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Coliform Bacteria ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
E Coli ◽  
Protein Encoding ◽  
Encoding Genes

Escherichia coli 4s is a Gram-negative bacterium found in the equine intestinal ecosystem alongside diverse other coliform bacteria and bacteriophages. This announcement describes the complete genome of the T7-like E. coli 4s podophage Penshu1. From its 39,263-bp genome, 54 protein-encoding genes and a 179-bp terminal repeat were predicted.

scholarly journals Complete Genome Sequence of the Biocontrol Agent YeastRhodotorula kratochvilovaeStrain LS11

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Cecilia Miccoli ◽  
Davide Palmieri ◽  
Filippo De Curtis ◽  
Giuseppe Lima ◽  
Giuseppe Ianiri ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Genome Annotation ◽  
Complete Genome ◽  
Plant Pathogens ◽  
Biocontrol Agent ◽  
Antagonistic Activity ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACTRhodotorula kratochvilovaestrain LS11 is a biocontrol agent (BCA) selected for its antagonistic activity against several plant pathogens both in the field and postharvest. Genome assembly includes 62 contigs for a total of 22.56 Mbp and a G+C content of 66.6%. Genome annotation predicts 7,642 protein-encoding genes.

scholarly journals Complete Genome Sequence of Paludibaculum fermentans P105T, a Facultatively Anaerobic Acidobacterium Capable of Dissimilatory Fe(III) Reduction

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Svetlana N. Dedysh ◽  
Alexey V. Beletsky ◽  
Irina S. Kulichevskaya ◽  
Andrey V. Mardanov ◽  
Nikolai V. Ravin
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Content Type ◽  
Facultatively Anaerobic ◽  
Multiple Genes ◽  
Membrane Bound

ABSTRACT Paludibaculum fermentans P105T is a facultatively anaerobic heterotroph of the phylum Acidobacteria which is capable of dissimilatory Fe(III) reduction. This bacterium is a common inhabitant of wetlands and groundwater bodies. The finished genome of strain P105T is 9.53 Mb in size and contains multiple genes coding for membrane-bound multiheme cytochromes.

scholarly journals Complete Genome Sequence of Fusobacterium necrophorum subsp. necrophorum ATCC 25286

2019 ◽  
Vol 8 (8) ◽  
Author(s):  
Ariana Umaña ◽  
Justin A. Lemkul ◽  
Daniel J. Slade
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Anaerobic Bacterium ◽  
Fusobacterium Necrophorum ◽  
Gram Negative ◽  
Content Type

Fusobacterium necrophorum is a pathogenic Gram-negative, anaerobic bacterium. In this study, we present the first complete genome sequence of Fusobacterium necrophorum subsp.

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