scholarly journals Draft Genome Sequence of Rhodotorula mucilaginosa from an Adult Patient in Qatar

2021 ◽  
Vol 10 (42) ◽  
Author(s):  
Sathyavathi Sundararaju ◽  
Husam Salah ◽  
Emad B. Ibrahim ◽  
Andres Perez-Lopez ◽  
Fatma Ben Abid ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Draft Genome ◽  
Immunocompetent Patient ◽  
Draft Genome Sequence ◽  
Rhodotorula Mucilaginosa ◽  
Public Health Importance ◽  
Content Type ◽  
Opportunistic Fungal Pathogen ◽  
Reference Genomes

Rhodotorula mucilaginosa is an opportunistic fungal pathogen of public health importance. We present the draft genome sequence of an isolate (Rhodo3571) cultured from an immunocompetent patient. The isolate is similar to other R. mucilaginosa genomes in the NCBI database. Presented here are the genome assembly and its comparison to other reference genomes.

scholarly journals Draft Genome Sequence of the Human-Pathogenic Fungus Scedosporium boydii

2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Ludovic Duvaux ◽  
Jason Shiller ◽  
Patrick Vandeputte ◽  
Thomas Dugé de Bernonville ◽  
Christopher Thornton ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Genome Sequence ◽  
Fungal Pathogen ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Pathogenic Mechanisms ◽  
Human Pathogenic Fungus ◽  
Opportunistic Fungal Pathogen

ABSTRACT The opportunistic fungal pathogen Scedosporium boydii is the most common Scedosporium species in French patients with cystic fibrosis. Here we present the first genome report for S. boydii, providing a resource which may enable the elucidation of the pathogenic mechanisms in this species.

scholarly journals Genome Sequence of the Fungus Nannizziopsis barbatae, an Emerging Reptile Pathogen

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Daniel Powell ◽  
Ashley Jones ◽  
Nicola Kent ◽  
Parwinder Kaur ◽  
Ido Bar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Nannizziopsis barbatae is an emerging fungal pathogen capable of causing contagious dermatomycosis in reptiles. Here, we report a 31.54-Mb draft genome sequence of an isolate originating from an infected eastern water dragon in Brisbane, Australia.

scholarly journals Draft Genome Sequence of the Birch Tree Fungal Pathogen Taphrina betulina UCD315

2019 ◽  
Vol 8 (48) ◽  
Author(s):  
Padraic Heneghan ◽  
Adam P. Ryan ◽  
Darragh Nimmo ◽  
Claudine Duggan ◽  
Paurush Kumar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Birch Tree ◽  
Birch Trees ◽  
Ascomycete Yeast

Taphrina betulina is the ascomycete yeast that causes the formation of witches’ brooms in birch trees. Here, we report the first draft genome sequence of T. betulina, from strain UCD315, isolated from soil in Ireland. The genome is haploid and 12.5 Mb long.

scholarly journals Genome Sequence of Aureobasidium pullulans AY4, an Emerging Opportunistic Fungal Pathogen with Diverse Biotechnological Potential

2012 ◽  
Vol 11 (11) ◽  
pp. 1419-1420 ◽  
Author(s):  
Giek Far Chan ◽  
Hasima Mustafa Bamadhaj ◽  
Han Ming Gan ◽  
Noor Aini Abdul Rashid
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Aureobasidium Pullulans ◽  
Immunocompromised Patient ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Biotechnological Potential ◽  
Content Type ◽  
Opportunistic Fungal Pathogen

ABSTRACTAureobasidium pullulansAY4 is an opportunistic pathogen that was isolated from the skin of an immunocompromised patient. We present here the draft genome of strain AY4, which reveals an abundance of genes relevant to bioindustrial applications, including biocontrol and biodegradation. Putative genes responsible for the pathogenicity of strain AY4 were also identified.

scholarly journals Draft Genome Sequence of a Burkholderia cepacia Complex Strain Isolated from a Human Intra-abdominal Abscess

2021 ◽  
Vol 10 (11) ◽  
Author(s):  
Yuting Zhai ◽  
Kathryn E. DeSear ◽  
Kartik Cherabuddi ◽  
J. Glenn Morris ◽  
Kwangcheol C. Jeong
Keyword(s):  
Genome Sequence ◽  
Burkholderia Cepacia ◽  
Draft Genome ◽  
Immunocompetent Patient ◽  
Burkholderia Cepacia Complex ◽  
Draft Genome Sequence ◽  
Abdominal Abscess ◽  
Opportunistic Pathogens ◽  
Content Type ◽  
Complex Strain

ABSTRACT Burkholderia cepacia complex (Bcc) bacteria are opportunistic pathogens with high transmissibility and mortality. Here, we report the draft genome sequence of a Bcc strain isolated from a deep abscess culture in an immunocompetent patient with no relevant prior medical history.

scholarly journals First De Novo Draft Genome Sequence of the Pathogenic Fungus Fusarium udum F02845, Associated with Pigeonpea (Cajanus cajan L. Millspaugh) Wilt

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Alok Kumar Srivastava ◽  
Prem Lal Kashyap ◽  
Hillol Chakdar ◽  
Murugan Kumar ◽  
Anchal Kumar Srivastava ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Cajanus Cajan ◽  
De Novo ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fusarium Udum

Fusarium udum F02845 is a destructive fungal pathogen which causes pigeonpea (Cajanus cajan L. Millspaugh) wilt.

scholarly journals First Draft Genome Sequence of a Clinical Strain of Nocardia cerradoensis

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Gema Carrasco ◽  
Sara Monzón ◽  
Pilar Jiménez ◽  
Isabel Cuesta ◽  
Joaquín Bartolomé-Alvarez ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Gene Clusters ◽  
Immunocompetent Patient ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Intrinsic Resistance ◽  
Biosynthetic Gene Clusters ◽  
Content Type

ABSTRACT This paper reports the first draft genome sequence for a strain of Nocardia cerradoensis obtained from an immunocompetent patient with a knee infection. The 8.2-Mb genome has 8,329 coding sequences, including intrinsic resistance genes, biosynthetic gene clusters for polyketide synthase and nonribosomal peptide synthase, virulence genes, and prophages.

scholarly journals Draft Genome Sequence of Candida auris Strain LOM, a Human Clinical Isolate from Greater Metropolitan Houston, Texas

2019 ◽  
Vol 8 (25) ◽  
Author(s):  
S. Wesley Long ◽  
Randall J. Olsen ◽  
Hoang A. T. Nguyen ◽  
Matthew Ojeda Saavedra ◽  
James M. Musser
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Metropolitan Region ◽  
Draft Genome Sequence ◽  
Nanopore Sequencing ◽  
Emerging Pathogen ◽  
Candida Auris ◽  
Public Health Importance ◽  
Content Type ◽  
Oxford Nanopore

Candida auris is an emerging pathogen of considerable public health importance. We present the draft genome sequence of a strain recently cultured from the urine of a patient hospitalized in the greater Houston metropolitan region. Two combined Oxford Nanopore sequencing runs provided sufficient data to rapidly generate a draft genome.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

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