scholarly journals Complete Genome Sequences of Four Halophilic Thermus thermophilus Strains Isolated from Arima Hot Spring in Japan

2021 ◽  
Vol 10 (40) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Natsuki Tomariguchi ◽  
Yuko Ueno
Keyword(s):  
Genome Sequencing ◽  
Complete Genome ◽  
Hot Spring ◽  
Thermus Thermophilus ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genome Sequencing ◽  
Genomic Conservation

We isolated four Thermus thermophilus strains from Arima Hot Spring in Japan. Complete genome sequencing revealed that they showed average nucleotide identities of ≥99.21% to each other and to strains previously isolated from the same spot, but of ≤97.86% to strains from geographically different spots in Japan, reflecting habitat-specific genomic conservation.

scholarly journals Complete Genome Sequences of Thermus thermophilus Strains HB5002 and HB5008, Isolated from Mine Hot Spring in Japan

2021 ◽  
Vol 10 (16) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Toshiyuki Moriya ◽  
Natsuko Tokito ◽  
Tairo Oshima ◽  
Kei Yura ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Complete Genome ◽  
Hot Spring ◽  
Thermus Thermophilus ◽  
Nucleotide Identity ◽  
Whole Genome ◽  
Average Nucleotide Identity ◽  
Genome Sequences ◽  
Content Type

ABSTRACT We isolated Thermus thermophilus strains HB5002 and HB5008 from Mine Hot Spring in Japan. Whole-genome sequencing revealed that they showed ∼100% average nucleotide identity to each other, ≥98.53% to the T. thermophilus strains originating from the same spot but ≤97.64% to the T. thermophilus strains from geographically different places in Japan.

scholarly journals Complete Genome Sequences of African Salmonella enterica Serovar Enteritidis Clinical Isolates Associated with Bloodstream Infection

2021 ◽  
Vol 10 (12) ◽  
Author(s):  
Blanca M. Perez-Sepulveda ◽  
Alexander V. Predeus ◽  
Wai Yee Fong ◽  
Christopher M. Parry ◽  
John Cheesbrough ◽  
...  
Keyword(s):  
Bloodstream Infection ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
Genome Sequences ◽  
Salmonella Enterica Serovar Enteritidis ◽  
Content Type ◽  
Global Epidemic ◽  
Complete Genome Sequencing ◽  
African Clade

ABSTRACT We report the complete genome sequencing and annotation of four Salmonella enterica serovar Enteritidis isolates, two that are representative of the Central/Eastern African clade (CP255 and D7795) and two of the Global Epidemic clade (A1636 and P125109).

scholarly journals Complete Genome Sequences of Thermus thermophilus Strains AA2-20 and AA2-29, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Natsuki Tomariguchi
Keyword(s):  
Complete Genome ◽  
Hot Spring ◽  
Thermus Thermophilus ◽  
Genome Sequences ◽  
Content Type

We isolated halophilic and thermophilic Thermus thermophilus strains AA2-20 and AA2-29 from nonvolcanic, oceanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequences of these organisms to gain insights into halophilicity.

scholarly journals Complete Genome Sequencing of Thermus thermophilus Strain HC11, Isolated from Mine Geyser in Japan

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Kentaro Miyazaki
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Thermus Thermophilus ◽  
Average Nucleotide Identity ◽  
Content Type ◽  
Complete Genome Sequencing ◽  
Genetic Rearrangements

Thermus thermophilus strain HC11 was isolated from Mine Geyser in Japan, where type strain HB8 was isolated 50 years ago. In this article, the complete genome sequence of HC11 is presented. HC11 shares the highest average nucleotide identity with HB8 among known T. thermophilus genomes (93.1%) with no genetic rearrangements.

scholarly journals Complete Genome Sequencing of Mycoplasma synoviae Strain HN01, Isolated from Chicken in Henan Province, China

2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Bin Xu ◽  
Rui Liu ◽  
Lihan Tao ◽  
Meijuan Ding ◽  
Fengying Lu ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Henan Province ◽  
Epidemic Strain ◽  
Mycoplasma Synoviae ◽  
Content Type ◽  
Complete Genome Sequencing

Here, we report the complete genome sequence of Mycoplasma synoviae HN01, a virulent epidemic strain isolated from a sick chicken with synovitis in Henan Province, China. HN01 is the Asian source of an M. synoviae strain that is completely sequenced, genome annotated, and published with relevant data.

scholarly journals Multiple Genome Sequences of Heteropolysaccharide-Forming Acetic Acid Bacteria

2017 ◽  
Vol 5 (16) ◽  
Author(s):  
Julia U. Brandt ◽  
Frank Jakob ◽  
Andreas J. Geissler ◽  
Jürgen Behr ◽  
Rudi F. Vogel
Keyword(s):  
Acetic Acid ◽  
Genome Sequencing ◽  
Complete Genome ◽  
Acetic Acid Bacteria ◽  
Acetobacter Aceti ◽  
Genome Sequences ◽  
Content Type ◽  
Multiple Genome

ABSTRACT We report here the complete genome sequences of the acetic acid bacteria (AAB) Acetobacter aceti TMW 2.1153, A. persici TMW 2.1084, and Neoasaia chiangmaiensis NBRC 101099, which secrete biotechnologically relevant heteropolysaccharides (HePSs) into their environments. Upon genome sequencing of these AAB strains, the corresponding HePS biosynthesis pathways were identified.

scholarly journals Complete Genome Sequencing of Elizabethkingia sp. Strain 2-6

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
Kuan-Ming Liu ◽  
Hui-Lan Chang ◽  
Ming-Hong Hsu ◽  
Yi-Zhen Lin ◽  
Yu-Lin Lee ◽  
...  
Keyword(s):  
Intensive Care Unit ◽  
Intensive Care ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Relatedness ◽  
Medical Center ◽  
Content Type ◽  
Complete Genome Sequencing

Elizabethkingia sp. strain 2-6 was collected from a water faucet in the intensive care unit of a medical center in Taiwan. The complete genome sequence and annotation are reported. Analysis of the genetic relatedness to the known Elizabethkingia genomes indicated that strain 2-6 may be a new genomospecies of Elizabethkingia.

scholarly journals Complete Genome Sequences of 10 Yersinia pseudotuberculosis Isolates Recovered from Wild Boars in Germany

2018 ◽  
Vol 6 (19) ◽  
Author(s):  
Marie Reinhardt ◽  
Jens A. Hammerl ◽  
Stefan Hertwig
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Complete Genome ◽  
Yersinia Pseudotuberculosis ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Wild Boars ◽  
Human Infections

ABSTRACT We report here the draft genome sequences of 10 Yersinia pseudotuberculosis isolates recovered from tonsils of wild boars hunted between 2015 and 2016 in Germany. Whole-genome sequencing and bioinformatic analyses were performed to assess the diversity of Y. pseudotuberculosis , which may result in human infections caused by the consumption of game meat.

scholarly journals Whole-Genome Sequencing and Annotation of Clostridium tyrobutyricum Strain Cirm BIA 2237, Isolated from Silage

2019 ◽  
Vol 8 (30) ◽  
Author(s):  
Edouard Munier ◽  
Hélène Licandro-Séraut ◽  
Christine Achilleos ◽  
Rémy Cachon ◽  
Eric Beuvier
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Complete Genome ◽  
Bacterial Species ◽  
Whole Genome ◽  
Clostridium Tyrobutyricum ◽  
Content Type ◽  
Complete Genome Sequencing

Clostridium tyrobutyricum is the main bacterial species leading to the late blowing defect, a major cause of spoilage in semihard and hard cheeses. This study reports the complete genome sequencing, assembly, and annotation of C. tyrobutyricum strain Cirm BIA 2237, formerly called CNRZ 608, isolated from silage.

scholarly journals Draft Genome Sequence of Francisella noatunensis subsp. orientalis STIR-GUS-F2f7, a Highly Virulent Strain Recovered from Diseased Red Nile Tilapia Farmed in Europe

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
José Gustavo Ramírez-Paredes ◽  
Pär Larsson ◽  
Stefanie Wehner ◽  
Michaël Bekaert ◽  
Caroline Öhrman ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Oreochromis Niloticus ◽  
Complete Genome ◽  
Nile Tilapia ◽  
Virulent Strain ◽  
Draft Genome ◽  
Content Type ◽  
Complete Genome Sequencing ◽  
Highly Virulent

ABSTRACT A highly virulent strain of Francisella noatunensis subsp. orientalis, STIR-GUS-F2f7, was isolated from moribund red Nile tilapia (Oreochromis niloticus) farmed in Europe. In this communication, the complete genome sequencing of this bacterium is reported.

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