scholarly journals Complete Genome Sequence of a Canadian Klebsiella michiganensis Strain, Obtained Using Oxford Nanopore Technologies Sequencing

2020 ◽  
Vol 9 (46) ◽  
Author(s):  
Mingsong Kang ◽  
John Chmara ◽  
Marc-Olivier Duceppe ◽  
Beverley Phipps-Todd ◽  
Hongsheng Huang
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Treatment Facility ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Oxford Nanopore ◽  
Hospital Acquired ◽  
Oxford Nanopore Technologies

ABSTRACT Klebsiella michiganensis is a Gram-negative opportunistic pathogen that is associated with many hospital-acquired infections in humans. Here, we report the complete genome sequence of a K. michiganensis strain isolated from a Canadian wastewater treatment facility.

scholarly journals Complete Genome Sequence of Klebsiella pneumoniae Myophage Mulock

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Lorna Min ◽  
Lauren Lessor ◽  
Chandler O’Leary ◽  
Rachele Bonasera ◽  
Jason Gill ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Phage Lambda ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Genes Encoding ◽  
Hospital Acquired

Klebsiella pneumoniae is an opportunistic pathogen associated with hospital-acquired infections. This report describes the complete genome of the K. pneumoniae myophage Mulock, which appears to be a temperate myophage distantly related to other Klebsiella myophages in morphogenesis genes and is partially syntenic with the canonical Escherichia phage lambda in genes encoding lambda-like functions.

scholarly journals Complete Genome Sequence of Klebsiella pneumoniae Siphophage Sanco

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
Ryan W. Richardson ◽  
Lauren Lessor ◽  
Chandler O’Leary ◽  
Jason Gill ◽  
Mei Liu
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Antimicrobial Agents ◽  
Opportunistic Pathogen ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Hospital Acquired

Klebsiella pneumoniae is an opportunistic pathogen that is the cause of several hospital-acquired infections. Bacteriophages that target this bacterium could be used therapeutically as novel antimicrobial agents. Here, we present the complete genome sequence of the T1-like K. pneumoniae phage Sanco.

scholarly journals Complete Genome Sequence of Serratia marcescens Myophage Moabite

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Lyndsey Price ◽  
Matthew Rohren ◽  
Heather Newkirk ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Serratia Marcescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Amino Acid Identity ◽  
Trna Genes ◽  
Nosocomial Pathogen ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Hospital Acquired

Serratia marcescens is a Gram-negative nosocomial pathogen causing various hospital-acquired infections. Here, we describe the complete genome sequence of S. marcescens myophage Moabite. The genome of Moabite is 273,933 bp long, with 337 predicted coding sequences and two tRNA genes, and it shares its highest amino acid identity with Serratia phage 2050HW.

scholarly journals Complete Genome Sequence of Pasteurella multocida HuN001, a Capsular Type A Strain from a Human

2021 ◽  
Vol 10 (26) ◽  
Author(s):  
Lin Lin ◽  
Chunhui Li ◽  
Fei Wang ◽  
Xueying Wang ◽  
Yue Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pasteurella Multocida ◽  
Sputum Sample ◽  
Capsular Type ◽  
Circular Chromosome ◽  
Content Type ◽  
Oxford Nanopore ◽  
Oxford Nanopore Technologies

Here, we report the complete genome sequence of clinical Pasteurella multocida strain HuN001, which was cultured from a sputum sample from a patient with pneumonia. Oxford Nanopore Technologies sequencing provided a complete genome sequence of P. multocida HuN001, which contains a 2,287,216-bp circular chromosome with an average G+C content of 40.33%.

scholarly journals Complete Genome Sequence of a Multidrug-Resistant, blaNDM-1-Expressing Klebsiella pneumoniae K66-45 Clinical Isolate from Norway

2017 ◽  
Vol 5 (27) ◽  
Author(s):  
Adam Heikal ◽  
Ørjan Samuelsen ◽  
Tom Kristensen ◽  
Ole Andreas Økstad
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Multidrug Resistant ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Positive Strain ◽  
Hospital Acquired ◽  
Norwegian Patient

ABSTRACT Multidrug-resistant Klebsiella pneumoniae is a major cause of hospital-acquired infections. Here, we report the complete genome sequence of the multidrug-resistant, bla NDM-1-positive strain K. pneumoniae K66-45, isolated from a hospitalized Norwegian patient.

scholarly journals Complete Genome Sequence of Serratia marcescens Siphophage Scapp

2019 ◽  
Vol 8 (19) ◽  
Author(s):  
Brian T. Koehler ◽  
Helena Hopson ◽  
Rohit Kongari ◽  
Rachele Bonasera ◽  
Adriana C. Hernandez-Morales ◽  
...  
Keyword(s):  
Urinary Tract ◽  
Serratia Marcescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Drug Resistant ◽  
Content Type ◽  
Control Drug ◽  
Hospital Acquired

Serratia marcescens is an opportunistic pathogen that typically infects the respiratory and urinary tract, with the majority of cases being hospital acquired. The study of S. marcescens phages may help control drug-resistant S. marcescens strains.

scholarly journals Complete Genome Sequence of Mycobacterium chimaera SJ42, a Nonoutbreak Strain from an Immunocompromised Patient with Pulmonary Disease

2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Nabeeh A. Hasan ◽  
René L. Warren ◽  
L. Elaine Epperson ◽  
Allyson Malecha ◽  
David C. Alexander ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Mycobacterium Avium ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Immunocompromised Patient ◽  
Opportunistic Pathogen ◽  
Nontuberculous Mycobacterium ◽  
Content Type ◽  
Oxford Nanopore ◽  
Disseminated Disease

ABSTRACT Mycobacterium chimaera, a nontuberculous mycobacterium (NTM) belonging to the Mycobacterium avium complex (MAC), is an opportunistic pathogen that can cause respiratory and disseminated disease. We report the complete genome sequence of a strain, SJ42, isolated from an immunocompromised male presenting with MAC pneumonia, assembled from Illumina and Oxford Nanopore data.

scholarly journals Complete Genome Sequence of Neisseria gonorrhoeae Multilocus Sequence Type ST7363 Isolated from Thailand

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Thitima Cherdtrakulkiat ◽  
Thidathip Wongsurawat ◽  
Piroon Jenjaroenpun ◽  
Sawannee Sutheeworapong ◽  
Wanna Leelawiwat ◽  
...  
Keyword(s):  
Neisseria Gonorrhoeae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequence Type ◽  
Circular Chromosome ◽  
Content Type ◽  
Oxford Nanopore ◽  
Siriraj Hospital ◽  
Oxford Nanopore Technologies

A Neisseria gonorrhoeae multilocus sequence type (MLST) ST7363 strain was isolated from a patient at the Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand, in 2010 and completely sequenced. This strain is susceptible to ceftriaxone and cefixime. A complete circular chromosome and circular plasmids were assembled from combined Oxford Nanopore Technologies (ONT) and Illumina sequencing.

scholarly journals Complete Genome Sequence of Klebsiella aerogenes Myophage Metamorpho

2021 ◽  
Vol 10 (5) ◽  
Author(s):  
Kyra E. Groover ◽  
Kameron Garza ◽  
James Clark ◽  
Isla Hernandez ◽  
Jason J. Gill ◽  
...  
Keyword(s):  
Antibiotic Treatment ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Hospitalized Patients ◽  
Klebsiella Aerogenes ◽  
Content Type

ABSTRACT The bacterium Klebsiella aerogenes is an opportunistic pathogen that often infects hospitalized patients and those who are immunocompromised. K. aerogenes in some cases can become resistant to antibiotic treatment. Being a potential therapeutic, Metamorpho is a T4-like myophage targeting K. aerogenes.

scholarly journals Complete Genome Sequence of Enterotoxigenic Escherichia coli Podophage LL11

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Matthew Theodore ◽  
Lauren Lessor ◽  
Chandler O’Leary ◽  
Rohit Kongari ◽  
Jason Gill ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Alternative Treatment ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Foodborne Illness ◽  
Enterotoxigenic Escherichia Coli ◽  
Content Type ◽  
Illness Study

Enterotoxigenic Escherichia coli (ETEC) is an opportunistic pathogen that commonly causes foodborne illness. Study of bacteriophages against this pathogen could be useful to develop alternative treatment approaches. Here, we present the complete genome sequence of LL11, a T7-like podophage that infects ETEC.

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