scholarly journals Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1

2020 ◽  
Vol 9 (42) ◽  
Author(s):  
Mehmet Dayi ◽  
Simo Sun ◽  
Yasunobu Maeda ◽  
Ryusei Tanaka ◽  
Akemi Yoshida ◽  
...  
Keyword(s):  
Genome Assembly ◽  
Western Europe ◽  
Genomic Sequence ◽  
Bursaphelenchus Xylophilus ◽  
Pine Forests ◽  
Pinewood Nematode ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Large Repeat ◽  
Complete Genomic

ABSTRACT Bursaphelenchus xylophilus has been destroying pine forests in East Asia and western Europe. Here, we report its nearly complete genomic sequence containing five ∼12-Mb scaffolds and one ∼15-Mb scaffold representing six chromosomes. Large repeat regions that were previously unidentified are now reasonably integrated, particularly in the ∼15-Mb scaffold.

scholarly journals Complete Genomic Sequence of Pseudoalteromonas sp. Strain SAO4-4, a Protease-Producing Bacterium Isolated from Seawater of the Atlantic Ocean

2018 ◽  
Vol 6 (22) ◽  
Author(s):  
Bai-Lu Tang ◽  
Jin-Cheng Rong ◽  
Yan-Ru Dang ◽  
Bin-Bin Xie ◽  
Xiu-Lan Chen ◽  
...  
Keyword(s):  
Organic Matter ◽  
Atlantic Ocean ◽  
Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Aquatic Environments ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Circular Chromosomes ◽  
Complete Genomic

ABSTRACT The complete genome of Pseudoalteromonas sp. strain SAO4-4, a protease-producing bacterium from seawater, is composed of two circular chromosomes and one plasmid. This genome sequence will provide a better understanding of the ecological roles of protease-producing bacteria in the degradation of organic matter in marine aquatic environments.

scholarly journals Complete Genome Sequence of Vibrio gazogenes ATCC 43942

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Phani M. Gummadidala ◽  
Michael E. Holder ◽  
Jacqueline L. O’Brien ◽  
Nadim J. Ajami ◽  
Joseph F. Petrosino ◽  
...  
Keyword(s):  
Knowledge Base ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Complete Genomic

ABSTRACT Vibrio gazogenes ATCC 43942 has the potential to synthesize a plethora of metabolites which are of clinical and agricultural significance in response to environmental triggers. The complete genomic sequence of Vibrio gazogenes ATCC 43942 is reported herein, contributing to the knowledge base of strains in the Vibrio genus.

scholarly journals Complete Genomic Sequence of an Australian Sindbis Virus Isolated 44 Years Ago Reveals Unique Indels in the E2 and nsP3 Proteins

2019 ◽  
Vol 8 (20) ◽  
Author(s):  
Paul Pickering ◽  
John G. Aaskov ◽  
Wenjun Liu
Keyword(s):  
Amino Acid ◽  
Complete Genome Sequence ◽  
Envelope Protein ◽  
Sindbis Virus ◽  
Genomic Sequence ◽  
Nonstructural Protein ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Culex Annulirostris ◽  
Complete Genomic

The complete genome sequence of a Sindbis virus (SINV) strain (SINV_AUS_1975_18953) isolated in Australia in 1975 from Culex annulirostris mosquitoes revealed unique deletions in amino acid positions 182 to 184 and 201 to 228 of the E2 envelope protein and multiple indels in the nonstructural protein 3 (nsP3).

scholarly journals Complete Genome Sequence of Lactobacillus jensenii Strain SNUV360, a Probiotic for Treatment of Bacterial Vaginosis Isolated from the Vagina of a Healthy Korean Woman

2017 ◽  
Vol 5 (10) ◽  
Author(s):  
Sunghee Lee ◽  
Hyun Ju You ◽  
Bomi Kwon ◽  
GwangPyo Ko
Keyword(s):  
Bacterial Vaginosis ◽  
Genomic Sequence ◽  
Probiotic Strain ◽  
Korean Woman ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Vaginal Sample ◽  
Lactobacillus Jensenii ◽  
Insight Into ◽  
Complete Genomic

ABSTRACT Lactobacillus jensenii SNUV360 is a potential probiotic strain that shows antimicrobial activity for the treatment of bacterial vaginosis. Here, we present the complete genomic sequence of L. jensenii SNUV360, isolated from a vaginal sample from a healthy Korean woman. Analysis of the sequence may provide insight into its functional activity.

scholarly journals Complete Genome Sequence of Lactobacillus curvatus NFH-Km12, Isolated from the Japanese Traditional Fish Fermented Food Kabura-zushi

2018 ◽  
Vol 7 (1) ◽  
Author(s):  
Daisuke Kyoui ◽  
Natsumi Mikami ◽  
Hiroyuki Yamamoto ◽  
Taketo Kawarai ◽  
Hirokazu Ogihara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Fermented Food ◽  
Complete Genomic Sequence ◽  
Lactobacillus Curvatus ◽  
Content Type ◽  
Complete Genomic

Kabura-zushi is a traditional Japanese fermented food made from yellowtail, rice, salt, and kōji. In this study, the complete genomic sequence of Lactobacillus curvatus NFH-Km12, isolated from this unique food, is reported.

scholarly journals Complete Genome Sequence of a Severe Acute Respiratory Syndrome-Related Coronavirus from Kenyan Bats

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Ying Tao ◽  
Suxiang Tong
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rectal Swab ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Related Virus ◽  
Complete Genomic

We identified a strain of betacoronavirus BtKY72/Rhinolophus sp./Kenya/2007 (here BtKY72) from rectal swab samples in Kenyan bats. This paper reports the complete genomic sequence of BtKY72, which is closely related to BtCoV/BM48-31/Bulgaria/2008, a severe acute respiratory syndrome (SARS)-related virus from Rhinolophus bats in Europe.

scholarly journals Special Issue: Genetic Basis of Phenotypic Variation in Drosophila and Other Insects

Genes ◽  
2021 ◽  
Vol 12 (8) ◽  
pp. 1212
Author(s):  
J. Spencer Johnston ◽  
Carl E. Hjelmen
Keyword(s):  
Next Generation Sequencing ◽  
Genetic Basis ◽  
Genomic Sequence ◽  
Sequence Data ◽  
Complete Genomic Sequence ◽  
Special Issue ◽  
Model Species ◽  
Road Map ◽  
Generation Sequencing ◽  
Complete Genomic

Next-generation sequencing provides a nearly complete genomic sequence for model and non-model species alike; however, this wealth of sequence data includes no road map [...]

Complete Genomic Sequence of Bacteriophage H188: A Novel Vibrio kanaloae Phage Isolated from Yellow Sea

2016 ◽  
Vol 72 (5) ◽  
pp. 628-633 ◽  
Author(s):  
Yan Li ◽  
Min Wang ◽  
Qian Liu ◽  
Xue Song ◽  
Duobing Wang ◽  
...  
Keyword(s):  
Yellow Sea ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Complete Genomic

Complete genomic sequence ofKIR3DL1*0150102

2014 ◽  
Vol 84 (6) ◽  
pp. 595-596
Author(s):  
L.-M. Yindom ◽  
G. Wong ◽  
T. I. de Silva ◽  
S. L. Rowland-Jones
Keyword(s):  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Complete Genomic
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