scholarly journals Complete Genome Sequence of Nocardia farcinica W6977T Obtained by Combining Illumina and PacBio Reads

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Christopher A. Gulvik ◽  
Robert A. Arthur ◽  
Ben W. Humrighouse ◽  
Dhwani Batra ◽  
Lori A. Rowe ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Gene Clusters ◽  
Bioinformatic Analysis ◽  
Illumina Hiseq ◽  
Content Type ◽  
Nocardia Farcinica ◽  
Biosynthesis Gene

The complete genome sequence of the Nocardia farcinica type strain was obtained by combining Illumina HiSeq and PacBio reads, producing a single 6.29-Mb chromosome and 2 circular plasmids. Bioinformatic analysis identified 5,991 coding sequences, including putative genes for virulence, microbial resistance, transposons, and biosynthesis gene clusters.

scholarly journals Complete Genome Sequence and Annotation for Turicibacter sanguinis MOL361T (DSM 14220)

2020 ◽  
Vol 9 (25) ◽  
Author(s):  
Joel J. Maki ◽  
Daniel W. Nielsen ◽  
Torey Looft
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Intestinal Tract ◽  
Animal Species ◽  
Illumina Hiseq ◽  
Content Type ◽  
Long Read

ABSTRACT Turicibacter sanguinis MOL361 (DSM 14220) is the reference and type strain for the Turicibacter genus, commonly found in the intestinal tract of animal species. Long-read sequencing was performed on this strain to complement publicly available Illumina HiSeq-based data, producing a complete annotated genome sequence.

scholarly journals Complete Genome Sequence of the Pathogenic Vibrio vulnificus Type Strain ATCC 27562

2017 ◽  
Vol 5 (35) ◽  
Author(s):  
Douglas B. Rusch ◽  
Dean A. Rowe-Magnus
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Vibrio Vulnificus ◽  
Foodborne Pathogen ◽  
The United States ◽  
Environmental Isolates ◽  
Content Type ◽  
Pathogenic Vibrio

ABSTRACT Vibrio vulnificus has the highest death rate and economic burden per case of any foodborne pathogen in the United States. A complete genome sequence of the type strain promotes comparative analyses with other clinical and environmental isolates, improving our understanding of this important human pathogen and successful environmental organism.

scholarly journals Complete Genome Sequence of the Arcobacter halophilus Type Strain CCUG 53805

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee ◽  
James L. Bono
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Marine Environments ◽  
Free Living ◽  
Content Type

Many Arcobacter spp. are free living and are routinely recovered from marine environments.

scholarly journals Complete Genome Sequence of the Arcobacter skirrowii Type Strain LMG 6621

2018 ◽  
Vol 7 (17) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee
Keyword(s):  
Genome Sequence ◽  
Fecal Sample ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
The United Kingdom ◽  
Veterinary Importance

Arcobacter skirrowii is a species of veterinary importance, originally recovered from the feces, aborted fetuses, and preputial fluids of livestock. We present here the whole-genome sequence of the A. skirrowii type strain LMG 6621 (= 449/80T = CCUG 10374T), isolated in the United Kingdom from a lamb diarrheal fecal sample.

scholarly journals Complete Genome Sequence of the Arcobacter mytili Type Strain LMG 24559

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee ◽  
James L. Bono
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
River Delta ◽  
Marine Environments ◽  
Ebro River ◽  
Content Type ◽  
Ebro River Delta ◽  
Contaminated Waters

Multiple Arcobacter species have been recovered from fresh and contaminated waters, marine environments, and shellfish. Arcobacter mytili was recovered in 2006 from mussels collected from the Ebro River delta in Catalonia, Spain.

scholarly journals Complete Genome Sequence of Acinetobacter indicus Type Strain SGAir0564 Isolated from Tropical Air Collected in Singapore

2018 ◽  
Vol 6 (18) ◽  
pp. e00230-18 ◽  
Author(s):  
Vineeth Kodengil Vettath ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Protein Coding ◽  
Content Type ◽  
Air Samples ◽  
Protein Coding Genes ◽  
Long Reads

ABSTRACT Acinetobacter indicus (Gammaproteobacteria) is a strict aerobic nonmotile bacterium. The strain SGAir0564 was isolated from air samples collected in Singapore. The complete genome is 3.1 Mb and was assembled using a combination of short and long reads. The genome contains 2,808 protein-coding genes, 80 tRNAs, and 21 rRNA subunits.

scholarly journals Complete Genome Sequence of Potential Deoxynivalenol-Degrading Bacterium Youhaiella tibetensis Type Strain F4

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Yang Wang ◽  
Songxue Wang
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Culture Collection ◽  
Content Type ◽  
Microbiological Culture ◽  
Degrading Bacterium

Here, we report the first complete genome sequence of the potential deoxynivalenol-degrading strain Youhaiella tibetensis F4T (China General Microbiological Culture Collection Center [CGMCC] 1.12719T). To the best of our knowledge, this is also the first announcement of the complete genome sequence of a Youhaiella species.

scholarly journals Complete Genome Sequence of Bacillus paralicheniformis MDJK30, a Plant Growth-Promoting Rhizobacterium with Antifungal Activity

2017 ◽  
Vol 5 (25) ◽  
Author(s):  
Yun Wang ◽  
Hu Liu ◽  
Kai Liu ◽  
Chengqiang Wang ◽  
Hailin Ma ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Root Rot ◽  
Complete Genome ◽  
Gene Clusters ◽  
Content Type ◽  
Bacillus Paralicheniformis ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Metabolism Gene

ABSTRACT Bacillus paralicheniformis MDJK30 was isolated from the rhizosphere of a peony. It could control the pathogen of peony root rot. Here, we report the complete genome sequence of B. paralicheniformis MDJK30. Eleven secondary metabolism gene clusters were predicted.

scholarly journals Complete Genome Sequence of the Heavy-Metal-Tolerant Endophytic Type Strain of Salinicola tamaricis

2018 ◽  
Vol 6 (16) ◽  
pp. e00358-18 ◽  
Author(s):  
Nianjie Shang ◽  
Qiaoqiao Zhu ◽  
Meixue Dai ◽  
Guoyan Zhao
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Copper Ions ◽  
High Tolerance ◽  
Wetland Plant ◽  
Tamarix Chinensis ◽  
Content Type ◽  
Nickel Lead

ABSTRACT The first complete genome sequence of a recently described Salinicola tamaricis species was determined for the strain F01T (=CCTCC AB 2015304T =KCTC 42855T). The strain was isolated from the leaves of wetland plant Tamarix chinensis Lour and shows a high tolerance to heavy metals, such as manganese, nickel, lead, and copper ions.

scholarly journals Complete Genome Sequence of the Fruiting Myxobacterium Melittangium boletus DSM 14713

2017 ◽  
Vol 5 (45) ◽  
Author(s):  
Anke Treuner-Lange ◽  
Marc Bruckskotten ◽  
Oliver Rupp ◽  
Alexander Goesmann ◽  
Lotte Søgaard-Andersen
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Fruiting Bodies ◽  
Content Type

ABSTRACT The formation of spore-filled fruiting bodies in response to starvation represents a hallmark of many members of the order Myxococcales. Here, we present the complete 9.9-Mb genome of the fruiting type strain Melittangium boletus DSM 14713, the first member of this genus to have its genome sequenced.

Sign in / Sign up

Export Citation Format

Share Document